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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0409000 |
| Transcript ID | LotjaGi3g1v0409000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF581 family protein; TAIR: AT1G53885.1 linoleate 9S-lipoxygenase-4 protein, putative (DUF581); Swiss-Prot: sp|Q8LGS1|MARD1_ARATH Protein MARD1; TrEMBL-Plants: tr|A0A151QTP9|A0A151QTP9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0409000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81247701..81249658) extracted from Lotus japonicus Gifu genome v1.2.
CTATAAATGAATTTAATAAAAAATGAATGTGCTTTCATTGAGAAAGCTCCATTTATTTTTTGCCTTAGAAAGTGGAAAAT GTGCTAGTACATCTAACGTCTATCTAAACATGTTAGATAAAAATATTTGTAATGTAGCACGTGTGATGGAGTAATAGTGC AAACAGAGTAAACCAGTAGTGTTGTCATGTTCGTAGGGACCTCCTTTCTGGCTTTAAATATCCACCTCTGCTTTCTTTCT CAGAACTCATCAAACTCACCCTTTTCAGTGTATTCAATTGCTCTCTGTATGTCCCTCAATAATAGCTTATGATGCTACCA AAGTTCATGAGCCCCTTCAAGTTCAAGGTGGAATCCCAAGAAGGAAAGATGCTCAACAGAAGAAAAAAGCATGTAATGAG CTCCATTGAGGGTACCACCATGGATGTTGGCCTAAGGCTCCTCCCTCAAATTACCAGCTCAAAGAGCAAATCCAGCAATG TCCTTGTCAAATCTGCAGTGAAAAAGGCAAACCAAACAAGCCCTTCAGAATTTTGCTTCCTTAAAAATTGCAATCTATGC AATAAACAGCTCAGCCCAGACAAAGATATCTACATGTACAGGTATGTTGCAAATTTTTTGTAACTTTAGATAATTTAATT TCTGCTAGAAATCAACATGTATTGAATCACTCACTTAGACATTAATTGCATCTTTGCAAATCAATGAAACATTGAATCTG AATTCGGTCAATTTTGGAGAAAAGCTTCTATAAGTATGTTTCAAAGTGAAATTGATCCAAACATGCTATGAGATACCAAA AATTCTCTCAAGGTGCTACTGAAAATAAGATGATGTGGTAGAATCTTGGATCATTTTTCCCTCTTTATTTCAATTCTTAA ATCTTTTTGGTTTTACACACAAAAATAATGGGTCAGTCTAATTTGCTGATAAAACCTGGATATGGTGGTTTGTTATGCAG GGGAGATCAAGGTTTTTGCAGTATAGAGTGCAGGGACAGACAAATAGTTTTGGATGAGATGAGAGAATTACAGATCTCTA CGAAGCAAATGGTAGCATCTTATGGGCAATGTTGTAATGAGGCACGACGAGAGACTCGCCTTATTCTTGAGGACCTTCGA ATGCATAGACATAAATCTAAAGTCTAAACTCTAAATCCTTGTAATAAAAATTAAGACTAGCTATAATTTTGTGAAGAGGG ACCTCTATGAATCAATCCCTTCACTTTGATTTTGATCAGAAAATAGCTTCATAAGTTCGGAGCCTATTAAGATTTGAAAT ACTAAGTAGTAAACGGTAGAAAAATGACCTTAACCCTAATTTTAAAACCATGATTGAAATTCATATGTAATCGACTTACT TATATATATGGATGTTACCGAGACACTCTTATTTTGGTGGGTTTTCCATGAATTTTAATGCTTTTTCTTAAAGGATATGA TAATATTAAATAAAAGGAACACGGGCAACGCCCAATACATTAGCTTTATGGAAAGTAAATAAGCTTAGAGGAGCATCCTC AAGATCGAACCAGGAAAATCAAATGCTATCTTAGACAGATAATCAACCGCCTTATATAATATCGGTTCTTTTAATAAACG AAAGAAAATGAATCAAAATAAGAAGCTAACAAGAGACAATCCCATAAATATAACCAAAGTAAGATATATCATAGCCGGAC TTTAACCAAGCATTAAACAAAACTTAACAATCCATCTCAATAACCATCGAACATAAAGAGGGATCCTTGGACATGGCCCA ACAAAAGCATAAAGCCTCTGCAAATGCTGGGGAAGTAGCACGCCCCAAGGGAGCACAACCAGCTGCTAGGGGAAGACCTT CTTTGTCTGGGGCAATCAAAGCCATACCCGTATCCCCTAACTCGCGAAAAGTTACATCAAAATTAACTTTGACTTAGCTA TCTAATGGAGGAATTCATCGAACAACCCGAGTCATATT
CDS sequence (LotjaGi3g1v0409000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCTACCAAAGTTCATGAGCCCCTTCAAGTTCAAGGTGGAATCCCAAGAAGGAAAGATGCTCAACAGAAGAAAAAA GCATGTAATGAGCTCCATTGAGGGTACCACCATGGATGTTGGCCTAAGGCTCCTCCCTCAAATTACCAGCTCAAAGAGCA AATCCAGCAATGTCCTTGTCAAATCTGCAGTGAAAAAGGCAAACCAAACAAGCCCTTCAGAATTTTGCTTCCTTAAAAAT TGCAATCTATGCAATAAACAGCTCAGCCCAGACAAAGATATCTACATGTACAGGGGAGATCAAGGTTTTTGCAGTATAGA GTGCAGGGACAGACAAATAGTTTTGGATGAGATGAGAGAATTACAGATCTCTACGAAGCAAATGGTAGCATCTTATGGGC AATGTTGTAATGAGGCACGACGAGAGACTCGCCTTATTCTTGAGGACCTTCGAATGCATAGACATAAATCTAAAGTCTAA
Protein sequence (LotjaGi3g1v0409000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMLPKFMSPFKFKVESQEGKMLNRRKKHVMSSIEGTTMDVGLRLLPQITSSKSKSSNVLVKSAVKKANQTSPSEFCFLKN CNLCNKQLSPDKDIYMYRGDQGFCSIECRDRQIVLDEMRELQISTKQMVASYGQCCNEARRETRLILEDLRMHRHKSKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 158 | 157 | 4.1E-58 | – | |
| Pfam | 74 | 118 | 45 | 1.2E-21 | ||
| ProSiteProfiles | 76 | 120 | 45 | 24.41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0409000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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