Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0409100 |
| Transcript ID | LotjaGi3g1v0409100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Subtilisin-like protease; TAIR: AT3G14240.1 Subtilase family protein; Swiss-Prot: sp|Q9LUM3|SBT15_ARATH Subtilisin-like protease SBT1.5; TrEMBL-Plants: tr|G7L946|G7L946_MEDTR Subtilisin-like serine protease; Found in the gene: LotjaGi3g1v0409100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81278515..81280876) extracted from Lotus japonicus Gifu genome v1.2.
CTCTCTCCTTCTCCCCCTCACTTTCTCATTCTTCATTGCCACACTCTCACTACCACCTTCATCATCATCTTCTGACCCAG AAAAGCAAACCTTCATCGTCCAAGTCCAACATGAAGCCAAGCCTTCCATTTTCCCAACCCATAAGCACTGGTACGAGTCC TCCCTCTCCTCCATCTCCACCACCACAACTTCCACTAACCAAATCATCTACACCTACGACACTGTTTTCCACGGTTTCTC TGTAAAGCTCTCACCTCTAGAGGCCCAGAAGCTGCAATCACTCTCCCATGTCACCACCCTTATACCAGAACAGGTTCGCC AGCTTCACACCACTCGTTCTCCTCACTTCCTCGGTCTCAAAACCGCCGACAGAGCCGGGTTGCTCCATGAGACTGATTTC GGATCGGATCTTGTCATCGGAGTCATCGACACTGGTATCTGGCCGGAGAGGGAGAGCTTCAACGACCGTGATCTCGGTCC TGTTCCGGCTAAGTGGAAGGGACAGTGTGTTGCTGGAAGAGGCTTTCCGGCGAGCTCCTGCAACAGGAAGCTCATCGGAG CACGGTATTTTTCCGGTGGGTATGAGGCTAACAGTGGGAAGATGAACGAGACGACGGAGTATCGTTCCCCGAGGGACTCC GATGGCCACGGTACGCACACGGCTTCGATAGCTGCCGGCAGGTATGTATCTCCGGCGTCTACCTTGGGCTATGCTAAAGG GGTGGCGGCGGGCATGGCCCCCAAAGCCCGCCTCGCCGTTTACAAGGTGTGTTGGAATGGAGGCTGCTTTGACTCCGATA TCCTCGCGGCGTTTGACGCCGCCGTGTCCGACGGCGTCGATGTGGCGTCCCTCAGCGTTGGGGGTGTGGTGGTTCCGTAC CACCTCGACTCCATCGCTATTGGAGCTTTCGGGGCCTCCAGTGCCGGGGTTTTTGTCTCTGCCTCCGCCGGTAACGGTGG TCCCGGCGGTCTCACCGTCACCAATGTGGCACCATGGGTGACCACTGTGGGTGCTGGAACCATAGACAGGGATTTCCCTG CTGATGTGAAGCTTGGGAATGGTAAGGTTATACCAGGGGTTAGTGTTTATGGCGGGCCGGGTCTAACTCCGGGTCGGATG TACCCGGTTGTGTACGCGGGTGGTGAACAAGGTGGCAGTGGCGGTGGAGGGGGTGATGGTTATTCGTCTTCACTTTGCTT GGAAGGTTCGTTAGATCATAACTTTGTAAAGGGAAAGATTGTAGTTTGTGACAGGGGCATTAATTCAAGAGCTGCCAAGG GTGAAGTGGTGAAAGAATCAGGAGGAGTTGGCATGATTTTGGCTAATGGGGTGTTTGATGGTGAAGGGTTGGTGGCTGAT TGTCATGTGTTGCCGGCCACCGCGGTTGGTGCCAGTAGCGGTGATGAAATCCGTAGGTACATTGCGGCTGGGGCTAAATC CCGGTCGCCGCCCACCGCTACCATTGAGTTTAAAGGAACAAGGCTTGGGGTTAGGCCTGCACCTGTTGTGGCATCTTTCT CAGCTAGAGGACCAAACCCTGAATCCCCTGAGATTTTGAAGCCTGATGTTATAGCACCCGGGTTGAACATTCTAGCTGCT TGGCCTGATAGAGTTGGACCTTCTGGGGTTCCTTCGGATGTGCGCAGAACCGAGTTCAACATACTTTCCGGGACTTCAAT GGCGTGTCCTCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCGGCTCATCCCGACTGGAGTCCTGCTGCTATTAAATCAG CTCTGATGACCACAGCTTATACCGTGGATAACAAGGGCGATGCCATGTTGGATGAGTCCAATGGGAATGTGTCCTTGGTG TTTGATTACGGATCCGGCCATGTTCATCCAGAGAAAGCCATGGACCCGGGTTTGGTTTATGATATTTCTACCTATGATTA TGTGGATTTCTTGTGTAATTCGAATTACACCGCCAAGAACATCAAAGTGATCACAAGGAAGATTGCTGATTGCAGTGGGG CTAAAAAGGCAGGACATGCTGGCAATTTGAATTACCCATCGTTGTCTGCAGTTTTTGCACAATATGGGAAGCATAAAATG TCCACACACTTCATTAGAACTGTGACCAATGTTGGGGACCCCAAATCAGTGTACAAGGTCACTATTAAACCACCTCCTGG TATGGTGGTCTCAGTAGAGCCAGAGACCTTATCTTTCAGGAGGGTGGGTCAGAAGTTGAACTTTCTTGTTAGGGTGCAGA CTAGGGAAGTGAAGCTTTCTCCTGGGAGTTCTAGTATGAAGAGTGGTTCCATTGTTTGGTCTGATGGCAAGCACACTGTC ACAAGTCCCTTAGTTGTGACAATGCAGCAACCTCTGGATTAG
CDS sequence (LotjaGi3g1v0409100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTGTTTGATGGTGAAGGGTTGGTGGCTGATTGTCATGTGTTGCCGGCCACCGCGGTTGGTGCCAGTAGCGGTGAT GAAATCCGTAGGTACATTGCGGCTGGGGCTAAATCCCGGTCGCCGCCCACCTGTGGCATCTTTCTCAGCTAGAGGACCAA ACCCTGAATCCCCTGAGATTTTGAAGCCTGATGTTATAGCACCCGGGTTGAACATTCTAGCTGCTTGGCCTGATAGAGTT GGACCTTCTGGGGTTCCTTCGGATGTGCGCAGAACCGAGTTCAACATACTTTCCGGGACTTCAATGGCGTGTCCTCATGT TTCTGGTTTGGCTGCTTTGTTGAAAGCGGCTCATCCCGACTGGAGTCCTGCTGCTATTAAATCAGCTCTGATGACCACAG CTTATACCGTGGATAACAAGGGCGATGCCATGTTGGATGAGTCCAATGGGAATGTGTCCTTGGTGTTTGATTACGGATCC GGCCATGTTCATCCAGAGAAAGCCATGGACCCGGGTTTGGTTTATGATATTTCTACCTATGATTATGTGGATTTCTTGTG TAATTCGAATTACACCGCCAAGAACATCAAAGTGATCACAAGGAAGATTGCTGATTGCAGTGGGGCTAAAAAGGCAGGAC ATGCTGGCAATTTGAATTACCCATCGTTGTCTGCAGTTTTTGCACAATATGGGAAGCATAAAATGTCCACACACTTCATT AGAACTGTGACCAATGTTGGGGACCCCAAATCAGTGTACAAGGTCACTATTAAACCACCTCCTGGTATGGTGGTCTCAGT AGAGCCAGAGACCTTATCTTTCAGGAGGGTGGGTCAGAAGTTGAACTTTCTTGTTAGGGTGCAGACTAGGGAAGTGAAGC TTTCTCCTGGGAGTTCTAGTATGAAGAGTGGTTCCATTGTTTGGTCTGATGGCAAGCACACTGTCACAAGTCCCTTAGTT GTGACAATGCAGCAACCTCTGGATTAG
Protein sequence (LotjaGi3g1v0409100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCLMVKGWWLIVMCCRPPRLVPVAVMKSVGTLRLGLNPGRRPPVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRV GPSGVPSDVRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIKSALMTTAYTVDNKGDAMLDESNGNVSLVFDYGS GHVHPEKAMDPGLVYDISTYDYVDFLCNSNYTAKNIKVITRKIADCSGAKKAGHAGNLNYPSLSAVFAQYGKHKMSTHFI RTVTNVGDPKSVYKVTIKPPPGMVVSVEPETLSFRRVGQKLNFLVRVQTREVKLSPGSSSMKSGSIVWSDGKHTVTSPLV VTMQQPLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 15 | 15 | - | – | |
| ProSiteProfiles | 1 | 169 | 169 | 14.468 | – | |
| PANTHER | 37 | 327 | 291 | 3.9E-163 | – | |
| PANTHER | 37 | 327 | 291 | 3.9E-163 | – | |
| Gene3D | 41 | 183 | 143 | 1.9E-60 | ||
| Pfam | 43 | 148 | 106 | 4.9E-22 | ||
| SUPERFAMILY | 44 | 173 | 130 | 1.44E-32 | ||
| ProSitePatterns | 99 | 109 | 11 | - | ||
| Gene3D | 186 | 324 | 139 | 2.4E-40 | – | |
| Pfam | 217 | 321 | 105 | 1.6E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi3g1v0409100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…