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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023828
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 140 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 6.028s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0004409.1
n.a. PREDICTED: xylem serine proteinase 1-like [Cicer arietinum] gi|502157799|ref|XP_004510915.1| chr0 1613120 1616133 +
2 domain predictions
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Lj0g3v0057249.1
n.a. PREDICTED: xylem serine proteinase 1-like [Cicer arietinum] gi|502157799|ref|XP_004510915.1| chr0 18733948 18736961 -
2 domain predictions
 –
Lj0g3v0068789.1
n.a. n.a. chr0 24669069 24671282 +
2 domain predictions
 –
Lj0g3v0072829.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357462409|ref|XP_003601486.1| chr0 27130021 27142128 +
2 domain predictions
 –
Lj0g3v0097469.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357453673|ref|XP_003597117.1| chr0 41211199 41212725 -
2 domain predictions
 –
Lj0g3v0171039.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356559732|ref|XP_003548151.1| chr0 81877511 81880268 -
2 domain predictions
 –
Lj0g3v0190979.1
n.a. Tripeptidyl-peptidase [Medicago truncatula] gi|357443997|ref|XP_003592276.1| chr0 93369475 93383726 -
2 domain predictions
 –
Lj0g3v0214489.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502176589|ref|XP_004515893.1| chr0 108687212 108691226 +
2 domain predictions
 –
Lj0g3v0241589.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502099703|ref|XP_004491541.1| chr0 125326389 125327674 -
2 domain predictions
 –
Lj0g3v0253119.1
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356551582|ref|XP_003544153.1| chr0 131420222 131423310 -
2 domain predictions
 –
Lj0g3v0255389.1
n.a. PREDICTED: xylem serine proteinase 1-like [Cicer arietinum] gi|502157799|ref|XP_004510915.1| chr0 132680509 132683522 +
2 domain predictions
 –
Lj0g3v0284549.3
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502106325|ref|XP_004492916.1| chr0 147640907 147642514 -
2 domain predictions
 –
Lj0g3v0313839.1
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356551582|ref|XP_003544153.1| chr0 163842472 163844624 +
2 domain predictions
 –
Lj0g3v0340319.1
n.a. PREDICTED: cucumisin-like [Cicer arietinum] gi|502169063|ref|XP_004514528.1| chr0 178268971 178271549 -
2 domain predictions
 –
Lj0g3v0354669.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357453673|ref|XP_003597117.1| chr0 186828692 186831535 +
2 domain predictions
 –
Lj1g3v2215380.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356509291|ref|XP_003523384.1| chr1 26360087 26363662 +
2 domain predictions
 –
Lj1g3v2608130.1
n.a. PREDICTED: xylem serine proteinase 1-like [Cicer arietinum] gi|502104881|ref|XP_004492669.1| chr1 30089689 30094881 +
2 domain predictions
 –
Lj1g3v2921640.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502106343|ref|XP_004492921.1| chr1 32804018 32822825 -
2 domain predictions
 –
Lj1g3v2921640.2
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502106343|ref|XP_004492921.1| chr1 32815712 32822825 -
2 domain predictions
 –
Lj1g3v4528380.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357510203|ref|XP_003625390.1| chr1 53301536 53304674 -
2 domain predictions
 –
Lj1g3v4667840.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356535933|ref|XP_003536496.1| chr1 55305206 55308704 +
2 domain predictions
 –
Lj1g3v4667850.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356535933|ref|XP_003536496.1| chr1 55305206 55307800 +
2 domain predictions
 –
Lj1g3v4667860.1
n.a. n.a. chr1 55306973 55308704 -
2 domain predictions
 –
Lj1g3v4703020.1
n.a. PREDICTED: xylem serine proteinase 1-like [Cicer arietinum] gi|502111754|ref|XP_004494157.1| chr1 56131268 56134470 -
2 domain predictions
 –
Lj2g3v0391790.1
n.a. PREDICTED: tripeptidyl-peptidase 2-like isoform 1 [Glycine max] gi|356530860|ref|XP_003533997.1| chr2 6091149 6105276 +
2 domain predictions
 –
Lj2g3v0794730.1
n.a. PREDICTED: membrane-bound transcription factor site-1 protease-like [Glycine max] gi|356531271|ref|XP_003534201.1| chr2 12562268 12568261 -
2 domain predictions
 –
Lj2g3v0836920.2
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356531311|ref|XP_003534221.1| chr2 13026250 13031062 -
2 domain predictions
 –
Lj2g3v0878780.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|358344598|ref|XP_003636375.1| chr2 13476511 13478548 -
2 domain predictions
 –
Lj2g3v1573060.1
n.a. PREDICTED: subtilisin-like protease-like isoform X1 [Cicer arietinum] gi|502161828|ref|XP_004512297.1| chr2 25014942 25035430 -
2 domain predictions
 –
Lj2g3v2662860.1
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356499137|ref|XP_003518399.1| chr2 35984472 35991936 -
2 domain predictions
 –
Lj2g3v2879530.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357493251|ref|XP_003616914.1| chr2 37539953 37543276 -
2 domain predictions
 –
Lj2g3v3089600.1
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356551582|ref|XP_003544153.1| chr2 39781516 39784420 +
2 domain predictions
 –
Lj3g3v0549600.1
n.a. Subtilisin-like serine protease [Medicago truncatula] gi|357512771|ref|XP_003626674.1| chr3 6111654 6115753 +
2 domain predictions
 –
Lj3g3v0549610.1
n.a. Subtilisin-like serine protease [Medicago truncatula] gi|357512771|ref|XP_003626674.1| chr3 6120366 6124453 +
2 domain predictions
 –
Lj3g3v0730310.1
n.a. Subtilisin-like serine protease [Medicago truncatula] gi|357512771|ref|XP_003626674.1| chr3 8273519 8277116 -
2 domain predictions
 –
Lj3g3v2504180.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356559732|ref|XP_003548151.1| chr3 30698579 30699923 -
2 domain predictions
 –
Lj3g3v2575850.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502156610|ref|XP_004510560.1| chr3 31387368 31390196 +
2 domain predictions
 –
Lj3g3v2576790.1
n.a. PREDICTED: subtilisin-like protease-like isoform X1 [Cicer arietinum] gi|502156502|ref|XP_004510506.1| chr3 31871435 31874347 +
2 domain predictions
 –
Lj3g3v2576800.1
n.a. n.a. chr3 31871949 31875140 -
2 domain predictions
 –
Lj3g3v2576800.2
n.a. n.a. chr3 31871949 31875140 -
2 domain predictions
 –
Lj3g3v2995720.1
n.a. subtilase [Lotus japonicus] gi|163914235|dbj|BAF95887.1| chr3 37208090 37213269 +
2 domain predictions
 –
Lj3g3v3349720.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357453673|ref|XP_003597117.1| chr3 41180245 41181588 -
2 domain predictions
 –
Lj3g3v3528590.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356544850|ref|XP_003540860.1| chr3 43170112 43173227 -
2 domain predictions
 –
Lj4g3v1387920.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502176589|ref|XP_004515893.1| chr4 21200985 21203307 -
2 domain predictions
 –
Lj4g3v1388200.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502176592|ref|XP_004515894.1| chr4 21250969 21256334 -
2 domain predictions
 –
Lj4g3v2136040.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356562099|ref|XP_003549311.1| chr4 29321518 29327845 -
2 domain predictions
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Lj4g3v2294450.1
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356553813|ref|XP_003545246.1| chr4 31944147 31945960 +
2 domain predictions
 –
Lj4g3v2578300.2
n.a. PREDICTED: subtilisin-like protease SDD1-like [Glycine max] gi|356510921|ref|XP_003524182.1| chr4 34643686 34647646 +
2 domain predictions
 –
Lj4g3v2715930.1
n.a. Serine protease aprX [Medicago truncatula] gi|357519433|ref|XP_003630005.1| chr4 36488461 36494695 -
2 domain predictions
 –
Lj5g3v0308400.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502125650|ref|XP_004499011.1| chr5 2859229 2864080 -
2 domain predictions
 –