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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0410700 |
| Transcript ID | LotjaGi3g1v0410700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein DnaJ; TAIR: AT3G14200.1 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|Q5SLW9|DNAJ1_THET8 Chaperone protein DnaJ 1; TrEMBL-Plants: tr|I3SRD8|I3SRD8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0410700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81444631..81449953) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAAAGGAGTTAAAGGACATTGTTTAGGAAGAACCTTCTGGAGAGACTCTCCACAAATATCTGCATCAGCATGGAATC TTAGCCCTGCATCACCACCATCAATCCTCATCCCACAGTCAAGAAAAACAAAACAAAACATTATTATTATTATTATTCCC ACACTGGTTTTATTAAATAAAACTATATAATGTATAGAAGTGAATGTCTCTGGATTGTTCATGAGGCTAAGAAGAGAAGG GAAGAGTCTTTTTCCTCTGCTCTCTTCACAGCCCAAAACAAAATGCCAACTTGTGTGTCCATGTTGACCAAATCCAACTT GTCATTCATCCAACTTATATAATTTTTATATATATATCAGATACATATAGATATATATAATCATAGACTAGTGTTATTGT TATTGTGATTGTGTCTGGGTTTAATCTTGGTTCCTCTGTTTTCTTTGATGGTTTGGTTGTGAGAAGAGAAGATTGTACTT TGGTTAGGGTTTGTTCATTCAATTCGCCGACAAGAAACTTCGGTTTCATATTTGATTGGTACTTTGGTTGTGGAAGTTAA GATTGTTGTTGTTGTTGATTTTGGGAAGAATGGCTAATGGAGGAGACAAAAGCAATGATTTCTATGCTGTTCTGGGCTTG AATAAGGAGTGCACTGAATCAGAGTTGAGGAATGCATATAAGAAACTTGCACTGGTTAGAATTGAATCTAAATGTTTCTT CTTTTCTTTTTCATGTTCTTCATATTCTCATAAATAACCCTGTTTCTGTTTCTTCAAAATCTTCTTCACATGGGTCTTGG CAAAATGTATTCAATTTTCATTCTTTGAAAGAACCCAATTATGGACTTATGGTTGACTTTCTTCCAATCCCATTAGCAGA AGAGTTTTTTTTTTGTGTTTTGGGAATTGCATGAAGTGAATTAGAGTCCATGTGTGGGGAAATGTGTGATTGAAACTGAT TGAAAATGAATTGTTCTTGTGTTGGAAATTGGAGTTGTGTTGTATAGTAAGAAAGAAAATTTTGTTTGATGAGATAGAAA TGGCACCCAGATCGTTGTTCAGCTTCAGGGAATTTGAAGTTTGTGGAAGAAGCTAAGAAGAAATTCCAGTCAATTCAAGA AGCTTATTCTGGTATGTAATTCTATTAAGCATTTTGCATTCCTTTAAATATTCTTATGATTGAAACATTGAGTCACTGGT TCATTTTCTCCTCCAAATTGAAGTGAAGTTGGAATTTTTAATTTGAATTGTGTTTTTCTATGTGACAGTTTTATCTGATG CGAACAAAAGATTAATGTACGACATAGGAGTTTATGATAGTGATGATGACGAAAATGTAAGTCACCCAGTTCATCTCACC TTAACATGTTCTTATGCTCTTCCTATGGCTATGTTTCATTTCATTCCCATAAGAGAAGCAGCATTAATTTTACCACCTTC TTATTGAGATTTGTCTTTTAAATTGTTGTTATTCTGCCCCCTTTCTTAAGAATTTTGCAATTTAATATATAATATGTAGA AGAGAATAAATGCGAACTTTGTTATCGGATCAGGATTGGCTGCACTCATTTTTCGACGCAGTCCCTGCGGTCATTCGATA TGAGTCATATAGAAGAGAATAAATGCAAAGTTGAAGTTATTGGATCAGGAATGGCTGCAGTCATTTTTTGACGCAGTCAC TGGGGTCGCTCAATATGAGTCATCCGATTAATATCGGACAGTTCTAGGTGAATAGGATATAAATACATGCTAAACATATG ATATGTCGAGCGGTTTGCATTTGTGATTGCACTGCAGTCAACCGCACTAAATCCAAATCCGAAGTTATCATGTCATGTCA AATTTTAACCGTTTAAATTGTGTCTTCTTTTTTTTTGGTTCATTGGTGTTGTTCTGGCATCTGCAGTCTTGTCAGTTGTG ATGTTTCTGGATTTTGCACCGTTCAATTATTTCCCCTAGTTCATCTTAACAGAGGTATCTTCGTCGGGATTGATAAGAAT CCATTTTGTCCAATAAGTGCTTGACTATTATAATCAATGGAGTTGCCATAAAGGAACAAACTTTTTCATAATTCAAGTCA CCTGGGTGTGTACATAGCACATGGGCATTTTGTTTAATGTTTATTGATTTCAATAAGGGAGCATAGCATAATTCATAGAA TCTAGTTTGGTTTTGGAAAGGGGGTGAATTGGATCTTGTTTCCATTAAATGGAAGAGTATTCCTGAACCAATAATTTGAA ACAACTAATCTAATGATGATTTTTTTTGCAGGGTATGGGAGACTTCTTGAACGAAATGGTAACAATGATGAGTCAGACTG AACCAAATGTGAGACTCTTTTTAATTCATTGGAACCTTTTTCTTTTTAATTTTGGCATGTTTGGTGGCAAAAGCTAGACA GAACAATTCGCTTAGTAGAAAAAGTTGTATCACCTTGCCCCCCCCCCCCCCCCCCAAGAAAAAGTTTCTAGATGTATACC AAAATAGCTAGTAGTTGAGAAGTAAAGACAGATAAATGACACATATTAAGGTTCATGTCTAAACACAAAATTTGCATAGC AATTTAAATTTTTCCAAGGTATTAACTAGTCTCCTCTGTTTTTCACATTAGTAAATTAAAATTAACTCGTCACTCACATA TACATTTTGGGATGCTATTAAGGTCTTTGCATTCCTTGCAGTTTAGTAGTTTTTAAGAAACATCCTTGGTTAGTGACAGC TTGGATGAGAGTTTAAGGCATTAAAACAATGGTGTTAAAAGTTTGAACTATGATTTTTCCTATTTCTGCTCTGCTTTTTT ACCATAAGAGGGTTAAAAGTGTGGGTATGAGAGGTAGCGTGAATATTTGGGGTATGAAAATGCCGTTGCTCTAGAAGTTT TATCAGTTTGTAGACAATTGATTAATATAAAGTTGTACAAAATAGCAGGAAAATGGGGAGGAGAGCTTTGAGGAGTTGCA AAAGCTGTTTGAAGATATGTTCCAAGCGGATATTGGATTAGGTGGAAGCTCCTCTTTTGCTGCTGCCGGTTGCTCTACTT CATCCACTTACATGACTTACAGCGAAAGTTCGAATTCAAATAAACGCAATTCCACCGAGTTTAATTTTGGGAAGGCGGAG GATTCTTCTGACTTCGATGCTCATTACCCGAACTTCTGCTTTGGGGTTAGTATACTCTACATATTTTGTGTTTTTTTAGT TGATATAAGTTATCATCCATGGTATACATATCACACCATGATTATGAGAATGATGTGGGAAAAGGCATGCTAATGTGAAA TTTTGGGGCTTCAATCCCCATCCTCAACCCCCTAGAGTCCTAAAAAATTACATGCTCAGTCTTGTCTCTGTTCTTGCAAG TTATATGTATAATGAATTTTGTATGTATTGGAATTCGGGTTAGACCTAACTCTACCGAAAAAGCTAGCTCAGGGGTGATG ATTGCTCTATCGTGTATAAGGATTTATTTAGCCATATCTTTAATAAATGTGGGACTTTAACAATATGATTCAGGAATGTG GGTGACAGTGAGATTCTTTCCTCTCTAGGCCTTTCTCAATACGGCAAAATTAGTCTTGAAACTAAGTATAAGTATGCCAT GTAATCAGGTTTGTGATTCACTTTAAAGTAGACCTGATTTTTGAGGATGCAAAGGTTTGCATGATTTGTTAGGGTACGTA GCTTAGCAGATTATGCTATAGGTAATTTATGCATGTTGAATCTTTCTCAAGGGTCTTTTAATCAGTGGTATATTTTCTGT TGTTGATGTCCTCAAGGTCTGTCATGTAAATTATCATTATCAATGATGAGGGTACAAAACAATGGAGTATCTGTGTACGT ATATGAAAGTGGTAAGTGATTCCCCTGGTCTTTGTTACAAAATGTCATCAATCTCAGGCCCTTTGGCTGGCAATGAAGTA TTCTCTAAAAGCCCCAATTGTTATATCCATCATCGAACATTACATGGCATACTTCATGCATTGTATTGTATAGCTTCATC TTTATTCAGCAATTCCTTCTTGTGAAGACAGGTGAAGCAGCACCTCCAAGATATCAAGAAGGAAAACGTGGGAATTCCAG AAGGAGGAGGTAGCAGCAGACATAGAAATGGTAGAAAACAAAAAATCTCTCGCGGCCATGATGTTTCCTCTAATGACTAC CCCGGAATTTCGGCTAATTAATGAACTTGATGGCATGATAGTTGATGTGCATCAATATAGCACTTTGGTTATGGGAACTC CACAATCTTTTCTGGTTGGTAAATGCTAAGCTGGTGGAAGAATTGTGATTTCATTCACAAATGCCTTGAGAATTTGTTGG TAGTGGCACCTTCATTTTATGTACTCAAAGCTGCCATTAGGAGTTGGAATTGAAATCAATTGACAACTCATTTTGGTCTC TTCCTTAATGCAGATTTCTACTATTTCCTTTTTATGGTAATTAGTCATAAGTGTAATATTGGCCATTTATTGCAGTGATG TGGTACAGCCTCCATGTTCTCTATGTTTTCTTGTTTTGCCTAAATTTGACAAGCTTAGGAAAGTTCACAAAGATTATAAG AGAACGTAAAGATAAATCACTGTTGCACCCCCCATTGACTTGTTTCATATGATGTATGATAGATTCTGTTTTCTTGCATC CTGAGAAGAAATTTCATTGCATCATGGAAACAAATGGAGCCATTGGAGTTGATGGTTGGGTGACAAGGAAAAAAGATTAT TTCAAACAACATAAAAAATAGGCCGGTGTTAGGTATTAATTTTATGAATGGACGGTCCTACAGCACGTGAAGAGGGATCC CACTTGATATAAACTTGATTGATAATGAAGCAGATATTTTAGAAACACACTTGTTGATCACTTTTGGTTTTGAAAGCTTT TTGGGACCCAATTTCTAAGCATGAAGCCAAATAATTTCAATATTAGGCACTAGCATTCGTGGGTCCTTCACAGGCAATAA TTGGTTTGCTTTTGCCATACAAGTTGTGGAACTAGTTTGACATGGAATGTGGATTGGTGTACGCAATTTGCCAGCATTCA GCCAAAAAGTGGAAAACTGAAAACACCACACAGACACAACTTCACAACTTGCAATGTTGCCTTCATTCTCGTTGATGGGT ATTTACTATTTAGTATTAGTTTACCACCCCCACCAAGCCAAGTGTAGAGATTAACTTACACGAGTTTGTTCTAGCGGATT TAGCTCATCTAAAATGAGTGTGGTAAAGTGAGTCATATATTATTAATAAAAATAATTCAATTAATAGTGTGATGATTTAA TTACTTCACTTTATAAAGTCATTGAACTTACTTTAGAGAAATT
CDS sequence (LotjaGi3g1v0410700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTAATGGAGGAGACAAAAGCAATGATTTCTATGCTGTTCTGGGCTTGAATAAGGAGTGCACTGAATCAGAGTTGAG GAATGCATATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGCTTCAGGGAATTTGAAGTTTGTGGAAGAAG CTAAGAAGAAATTCCAGTCAATTCAAGAAGCTTATTCTGTTTTATCTGATGCGAACAAAAGATTAATGTACGACATAGGA GTTTATGATAGTGATGATGACGAAAATGGTATGGGAGACTTCTTGAACGAAATGGTAACAATGATGAGTCAGACTGAACC AAATGAAAATGGGGAGGAGAGCTTTGAGGAGTTGCAAAAGCTGTTTGAAGATATGTTCCAAGCGGATATTGGATTAGGTG GAAGCTCCTCTTTTGCTGCTGCCGGTTGCTCTACTTCATCCACTTACATGACTTACAGCGAAAGTTCGAATTCAAATAAA CGCAATTCCACCGAGTTTAATTTTGGGAAGGCGGAGGATTCTTCTGACTTCGATGCTCATTACCCGAACTTCTGCTTTGG GGTGAAGCAGCACCTCCAAGATATCAAGAAGGAAAACGTGGGAATTCCAGAAGGAGGAGGTAGCAGCAGACATAGAAATG GTAGAAAACAAAAAATCTCTCGCGGCCATGATGTTTCCTCTAATGACTACCCCGGAATTTCGGCTAATTAA
Protein sequence (LotjaGi3g1v0410700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANGGDKSNDFYAVLGLNKECTESELRNAYKKLALKWHPDRCSASGNLKFVEEAKKKFQSIQEAYSVLSDANKRLMYDIG VYDSDDDENGMGDFLNEMVTMMSQTEPNENGEESFEELQKLFEDMFQADIGLGGSSSFAAAGCSTSSTYMTYSESSNSNK RNSTEFNFGKAEDSSDFDAHYPNFCFGVKQHLQDIKKENVGIPEGGGSSRHRNGRKQKISRGHDVSSNDYPGISAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 230 | 225 | 1.1E-98 | – | |
| PANTHER | 6 | 230 | 225 | 1.1E-98 | – | |
| Gene3D | 7 | 138 | 132 | 3.4E-25 | ||
| SUPERFAMILY | 8 | 93 | 86 | 2.36E-23 | ||
| SMART | 9 | 73 | 65 | 9.3E-25 | ||
| CDD | 10 | 70 | 61 | 2.40579E-22 | ||
| Pfam | 10 | 78 | 69 | 4.0E-22 | ||
| ProSiteProfiles | 10 | 81 | 72 | 19.353 | ||
| PRINTS | 12 | 30 | 19 | 7.0E-18 | ||
| PRINTS | 30 | 45 | 16 | 7.0E-18 | ||
| PRINTS | 53 | 73 | 21 | 7.0E-18 | ||
| ProSitePatterns | 58 | 77 | 20 | - | ||
| PRINTS | 73 | 92 | 20 | 7.0E-18 | ||
| MobiDBLite | 199 | 236 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0410700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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