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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0415300 |
| Transcript ID | LotjaGi3g1v0415300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | AP2-like ethylene-responsive transcription factor; TAIR: AT1G72570.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q1PFE1|AIL1_ARATH AP2-like ethylene-responsive transcription factor AIL1; TrEMBL-Plants: tr|K7MEH0|K7MEH0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0415300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82059691..82063772) extracted from Lotus japonicus Gifu genome v1.2.
CCACAATGCATCAATCTCCTATGATTATGACCATCATATATTGGTATATATATCCCCTCAAAAGAAAAAGAATACCCAAA ATTTAAACCCCATCCGAAACCATTACCAGCTTTGAAGTTTGAGCTCTAAGTCCAACATTCCAAACTTACATAGAGAAGCA CTACAAACTCTTTAGCTTTTTAGAGAGAGATCTTTTTGTTGTAAGTGAAACTGTGCTGTGTGGTGATTGTTTTCTTGAGA AAAGGAAGAGGTAGGTGAGAGTTTGTGTGTGTGTGTTTTCTTGTGCTAATATGAGTAACTGGTTGGGGTTCTCTCTGACT CCACACTTGAGGATTGATGAAGAATTTGGGAGAGAAAACCAAGACCATGGTGGTGGAGGACCCTATCCTCCTCCTCACTT GTCTTCCATGCCTCTTCGCTCTGATGGCTCACTTTGTGTTTCTGCTGCACCTGAAGGTACTGCATGCCTTGCTAGCTAGC TAGACTCATCTTCATACTTTGATTGTTTTTCTAGTTCTTTCAATCCATGAACTTTTGTGGTTTCTTTAAGAAGTGAGGCT CTGAGTCTTTTGAGTGTTACTTAGTTTTTGCTTACCACCACCCTTTGCATGTTGCCCAAAATGGTTCCTTTTGTTCCCTT TCTCTTGATTGTTCCCTAAAGTTCCTACTTTGCTCTCAAATCAGTGTTTTTATTTCAATTGGCAATCAATTTGTAACTGG GTTTTGGTTCTTCTTGTAGAATGGAGATATGAAAATGCAATAACTGGAGGAAATTCAAATGATGAAGGTCCAAAGCTTGA AGATTTTTTGGGGTGTTACTCAAACTCTTCTTCCCTGACTGAAACCAAAGTCTTCTGCCATGACCAAAACCAAAACCAGA CCAAAATCAATGTTAATGTGCCCCCTGGGTTTTGCACCAATAGTACAGAGATTGAAACTGGGGAAAATCTCACAAACCCA TCTTCATTGTACCACTCTTTCCATGCATACAATGAAAACCCACATGGCCTTATCCCAAGCAATAGCATCTACAACAAGCC ATGGTTGGGTCAAACTCAGTTTGCTGATGTGAAATCTTCACCTGGTGCTAATGGGTGTAATTACCAATCTCTGAACTTGA CCATGAGCCCCACTGTACCAAATGGGGTGGGTGCAATTTCCACTGTTCAGGTGAATGAAGACAATCGCAAAAGGTCCATA GCAAAATCTCAGGCTAGAGAACCAGTCCCTCGCAAATCTATTGACACTTTTGGGCAGAGAACATCTCAATACCGTGGTGT TACCAGGTAGTAGTAGTGGATTGGATTATCTTGTTTATTAACAGTTCCTTCTACTTTTTTAGTTTAATTTTTGCTTAACT TTGCTATTTTTTTTGTTCATGTGTTTTGTTAGGCATAGATGGACTGGGAGATATGAGGCTCATTTGTGGGATAACAGTTG CAGAAAGGAAGGGCAAACAAGGAAAGGAAGGCAAGGTAAGAAAAACATCCCTTTTGGCTCTTTTTTAATCTTTTGCCTTA TTGTCATTGAGTGCATGTTTGGATATGCGCCACAACGAGACAAAATCACGGTCACAAAAGCAACTTCCCTAGGATATAAA AACAATCATAGTGGACTTAAATCAAGATTATTGAAGCAACTTCCCTTATAGAAGCAATTTTTTTTTGTCCATGATTTTGG CTTGATTTTCTACTGTGTATTCAGAAATACACTGAGTAAGCAAGTTTTGGGTGCATTTTCATTTTTCAAGAAACAAATAA GTGCTTTCACCTTTTTTCATTTGTATTACTTTTATTTCTTTCCTCTTTACTTTGAAAAGAGAATATACTAACGGTCTGCT TCATGCATTGGTTGGATTCTTCACTCATGGCTTCAAAACTTTCACAGTTTACCTTGGTAAGTCACACTCCTACACATGCA TTGGCTGTCTTTCTTTACTTCTTTACCATCTTTGTAACTCTATACAGTTTCACTATTAATATGATGCATTGAAAGGTGTG TTTGGTTTCTGAATATTATATATCTCTATTACTATTAGGTGGTTATGATAAGGAAGAAAAAGCAGCAAAGGCTTATGACT TAGCTGCACTCAAGTATTGGGGTCCAACAACTCACATAAATTTCCCTGTAAGGTTTCTGGAACTTGCACAGTTCTCTTGT TTGGAAAAAGTCTTACCTATGCTTTCAGTTCAGACCTGTAACAGTACAAAATAGAAGGAACAAAAAGCAGGGAAAATTAA ATTATTTGGAAAAGTCAAATGTTTCCTATGTATTTAATTTATGTAGCTTGAATCATAACATAGTAATTGTGATCACTCTA TGTATCTACTGCTTCTTAAATGCTCAGTTAAGCACTTATGAAAAGGAGCTTGAAGAGATGAAGAATATGACCAGGCAAGA ATTTGTCGCCAATTTAAGAAGGTGCCATTAACTTTTTTTCCCATGTTATCTTAGTGAATTCTTTTTTCTTTGTATTTGGC TTTTTCCTTTTGCCCCTCATATTAAGAAGGAATTGTCCTTTTTGCTTCCCTTGGCCAGGAAGAGCAGTGGATTTTCAAGG GGTGCATCAGTGTATAGAGGCGTGACAAGGTATGGCCTAAAGTGATATTGTGCTTTATCATTAATATTAGTAAAGTTTTT CCAAATGAATTATTTACTGCAACAATTTCAGCTTTTTTTCATTAAGGAGAGAGCAATTATTGGATAACATTTTATCTTTT TCCCCTTGGATGAATAATTAGACACCATCAACATGGAAGGTGGCAGGCTCGGATAGGAAGGGTTGCAGGGAACAAGGACT TGTATCTCGGTACATTTAGTAAGTTTCTCTTCCCTTTTCCCCTTTTCTATATTAAGTATTCTCCTCCTTTACTTTACTCA TGTTTGATACTGTGAATAAATTGCTGTTATTTATCAATTTTATTGTATTGCATATTTGTATCAAAATTTCCCTTTCATGA GAATTATTTCTGAAATTCATAAACTATCAAGAATTGACTCTCGCATCTGAATCAATTGTAAAAGGGTTTCCAAACATGCA CGTAGTATACATGTTGCTTAGTTACAGCACCACACAAGATTCCCTAGTAGATAACTAGATATCTAGGCTTTATAAGTTTA AGACTTTTACAATATCATGTGTTATCATTTGTTTAGTTTTCTTGTGAGTATCTTAATGTTTAATTATGTTCCCAATTTAT TGATTTACATTAGGTTTGTCATGCTAATTAGTTAAACCATAACAATGCTATAGGCACACAAGAAGAAGCTGCTGAAGCAT ATGACATAGCAGCAATCAAGTTCAGGGGAACGAGTGCTGTGACAAACTTTGACATAAGTCGATACGACGTGAAGAGAATT TGCTCAAGCTCAACTCTAATTGCTGGAGATCTTGCAAAACGGTCTCCGAAAGACTCTGCTTTGGTGGTGGCGGCCCCTGC CGAGGACTTCAATTCGTGCGGTTCATCAACACCTTCTCAATCTCAGCCACCCCCTTTGGCTATAACTGATGGTGAACATT CTGATGAGTTGTCCAACATGGTGTGGAACGCCAACAGTGATGAGCAACAGCAGCCGCAGAACGAGTGCGAAAACACCAAC CTCCTTGAATCATCATCATCACAGCAGGTTTCACCAGACAACAAGAATGCAATGAACCCTCAAAGTCCCAAGTGTTCTGA GGGACTAGCTAATGAGTTTGGAGTGAGTGGAGCAGATTATGGACATGGGTACTTCACCCTGCATGGACCAAAATTTGATG ATGGAAACAATGAAAATGACCACAGGCTTGGGAATTTGGGTCTGGTTAATCAAGTTCCTATGTTTGCTTTGTGGAATGAA TGAGAAGAATATCAGACTATTGATGTTAAAAACATTACCTTAGGATAACTAAGATCAGGTGACAGAATTATTTAATGATC ATTGTAGTTTGTTTATGTTAACTTGCTTTATGTTGAAAGAAAAGTGATGTCAGGAATGGTGATTCCTTCTGTGTTTAGTA GGTAGTGTTCATATACTATCTAGCAGAAGATTATCTTGTTTGGTGAAATTGAAAAATGAAGAAAAATCAATTATGAGTTT GG
CDS sequence (LotjaGi3g1v0415300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTAACTGGTTGGGGTTCTCTCTGACTCCACACTTGAGGATTGATGAAGAATTTGGGAGAGAAAACCAAGACCATGG TGGTGGAGGACCCTATCCTCCTCCTCACTTGTCTTCCATGCCTCTTCGCTCTGATGGCTCACTTTGTGTTTCTGCTGCAC CTGAAGAATGGAGATATGAAAATGCAATAACTGGAGGAAATTCAAATGATGAAGGTCCAAAGCTTGAAGATTTTTTGGGG TGTTACTCAAACTCTTCTTCCCTGACTGAAACCAAAGTCTTCTGCCATGACCAAAACCAAAACCAGACCAAAATCAATGT TAATGTGCCCCCTGGGTTTTGCACCAATAGTACAGAGATTGAAACTGGGGAAAATCTCACAAACCCATCTTCATTGTACC ACTCTTTCCATGCATACAATGAAAACCCACATGGCCTTATCCCAAGCAATAGCATCTACAACAAGCCATGGTTGGGTCAA ACTCAGTTTGCTGATGTGAAATCTTCACCTGGTGCTAATGGGTGTAATTACCAATCTCTGAACTTGACCATGAGCCCCAC TGTACCAAATGGGGTGGGTGCAATTTCCACTGTTCAGGTGAATGAAGACAATCGCAAAAGGTCCATAGCAAAATCTCAGG CTAGAGAACCAGTCCCTCGCAAATCTATTGACACTTTTGGGCAGAGAACATCTCAATACCGTGGTGTTACCAGGCATAGA TGGACTGGGAGATATGAGGCTCATTTGTGGGATAACAGTTGCAGAAAGGAAGGGCAAACAAGGAAAGGAAGGCAAGTTTA CCTTGGTGGTTATGATAAGGAAGAAAAAGCAGCAAAGGCTTATGACTTAGCTGCACTCAAGTATTGGGGTCCAACAACTC ACATAAATTTCCCTTTAAGCACTTATGAAAAGGAGCTTGAAGAGATGAAGAATATGACCAGGCAAGAATTTGTCGCCAAT TTAAGAAGGAAGAGCAGTGGATTTTCAAGGGGTGCATCAGTGTATAGAGGCGTGACAAGACACCATCAACATGGAAGGTG GCAGGCTCGGATAGGAAGGGTTGCAGGGAACAAGGACTTGTATCTCGGTACATTTAGCACACAAGAAGAAGCTGCTGAAG CATATGACATAGCAGCAATCAAGTTCAGGGGAACGAGTGCTGTGACAAACTTTGACATAAGTCGATACGACGTGAAGAGA ATTTGCTCAAGCTCAACTCTAATTGCTGGAGATCTTGCAAAACGGTCTCCGAAAGACTCTGCTTTGGTGGTGGCGGCCCC TGCCGAGGACTTCAATTCGTGCGGTTCATCAACACCTTCTCAATCTCAGCCACCCCCTTTGGCTATAACTGATGGTGAAC ATTCTGATGAGTTGTCCAACATGGTGTGGAACGCCAACAGTGATGAGCAACAGCAGCCGCAGAACGAGTGCGAAAACACC AACCTCCTTGAATCATCATCATCACAGCAGGTTTCACCAGACAACAAGAATGCAATGAACCCTCAAAGTCCCAAGTGTTC TGAGGGACTAGCTAATGAGTTTGGAGTGAGTGGAGCAGATTATGGACATGGGTACTTCACCCTGCATGGACCAAAATTTG ATGATGGAAACAATGAAAATGACCACAGGCTTGGGAATTTGGGTCTGGTTAATCAAGTTCCTATGTTTGCTTTGTGGAAT GAATGA
Protein sequence (LotjaGi3g1v0415300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNWLGFSLTPHLRIDEEFGRENQDHGGGGPYPPPHLSSMPLRSDGSLCVSAAPEEWRYENAITGGNSNDEGPKLEDFLG CYSNSSSLTETKVFCHDQNQNQTKINVNVPPGFCTNSTEIETGENLTNPSSLYHSFHAYNENPHGLIPSNSIYNKPWLGQ TQFADVKSSPGANGCNYQSLNLTMSPTVPNGVGAISTVQVNEDNRKRSIAKSQAREPVPRKSIDTFGQRTSQYRGVTRHR WTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSTYEKELEEMKNMTRQEFVAN LRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKR ICSSSTLIAGDLAKRSPKDSALVVAAPAEDFNSCGSSTPSQSQPPPLAITDGEHSDELSNMVWNANSDEQQQPQNECENT NLLESSSSQQVSPDNKNAMNPQSPKCSEGLANEFGVSGADYGHGYFTLHGPKFDDGNNENDHRLGNLGLVNQVPMFALWN E
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 62 | 499 | 438 | 8.1E-182 | – | |
| PANTHER | 62 | 499 | 438 | 8.1E-182 | – | |
| Pfam | 231 | 290 | 60 | 1.5E-11 | ||
| CDD | 231 | 300 | 70 | 4.07861E-22 | ||
| SUPERFAMILY | 231 | 300 | 70 | 9.15E-17 | ||
| Gene3D | 231 | 300 | 70 | 1.7E-20 | ||
| ProSiteProfiles | 232 | 298 | 67 | 18.953 | ||
| SMART | 232 | 304 | 73 | 4.6E-29 | ||
| PRINTS | 233 | 244 | 12 | 1.3E-6 | ||
| SUPERFAMILY | 333 | 394 | 62 | 9.15E-18 | ||
| Pfam | 333 | 384 | 52 | 1.2E-9 | ||
| CDD | 333 | 394 | 62 | 8.66551E-26 | ||
| SMART | 334 | 398 | 65 | 3.6E-34 | ||
| ProSiteProfiles | 334 | 392 | 59 | 19.006 | ||
| Gene3D | 334 | 394 | 61 | 5.3E-20 | ||
| PRINTS | 374 | 394 | 21 | 1.3E-6 | ||
| MobiDBLite | 431 | 453 | 23 | - | – | |
| MobiDBLite | 431 | 448 | 18 | - | – | |
| MobiDBLite | 468 | 507 | 40 | - | – | |
| MobiDBLite | 468 | 511 | 44 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0415300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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