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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0422100 |
| Transcript ID | LotjaGi3g1v0422100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q9CAK1|RLM1B_ARATH Disease resistance protein RML1B; TrEMBL-Plants: tr|A0A1J7FRL2|A0A1J7FRL2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0422100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83081903..83088852) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTAGTCCTCACCGGAGGGCGGAGCTCCGGCGAGAGTGTTGAGTGGCGGGCCATAGATGACATGGCATTATCCACATC ATTTTTATTTATTTATATTTCCACATAAATAATTAATAACTAAATTAAATAAAATTAATAATTAATTCAAAAATAAAAAT CCAGAAAATGTTGGGAAAAATTAAAATCAAAATTTTCTAAACCCTGATCCCCCTTCATCTTCTCAATCAAGCCTCTCTTT CTCTGAAAAAGAGAACCAGAAGGGAATTGGGTTTGCCACCCCACCTATTGGGTTTGGCACCCCACTTTATTCAATACGAG AATTAAATTTCCGTATTCAATACGAAATTTAAAATTCCGTATTTTTTTGTATGCAATAAATGGTTGAAAATGTGCCACAT ATGCTCAAATACAGTACGGTTTTTTAAGTTCCGTATTATTCGTATTAAATACGGAACTTTAAATACCATATTAAATAAAG TGGGGTGCGAAACCCAATAGGTGGGGTAACAAACCTATGAGGGGAACCATAAGCATATGTAGAATGTTGAGAACTTTTTA TGCGAAACCAGAATGTTCCACGAAAAAGATTCAAACTTCACTCTCTTCAACTCATTCCAAATGGTGGGCACCTTCTCCCT ACTCCACCACCGCCATCACCTCCAACGCCAACGGCGACCCCGCAACACCGTCAAAGCTTCTCGTCGTTCAACCCCGTCTC CGCTCAATGAAGCACTCTGCCTCGCCAATTCACTCGAAGAACAACGTGATGGGTATTTCCACACTGATTTCTTTGATAAG CCTTTGCCCCCTCACCTCCTTGTTCAGAATCCTTCTGTCAAAGGCCATAACGGTGGTCGTGGTGGCTTGGTGCGGTGGGT CGTTCAGCGTTGAAATGAGAGCCTCGGTTGACGGAGATAAAGGTTGTGGCAATTCGCGTTTCTTACAAACTCAAAACGTG AATCGCCCCTGGATCCGCCCTCACCACCACATGTCGCGTCCGTCGTCGTCCTAAACAACCGAAGAGCCTTGATGGGGGTA CGTTCCAGTTGCTCAGTTATGTGGGTTTTCTGGGTTTTGATTTGTGTGGGTTATGAATCTGGATTTTGTGGATTACATGG ATCTGAGTTTTGAATCTGGGTTATGTGGCTTTTGAATCTGGGTTTTGAAAAAGATTCAATTGATTTGGGTTATGTGGATT CTATGGATTTGGCCATTGAGTTTCTAACTTGAATTTGGGTTGTTTTCTGGGTTTTCAATGTTTGGCCATTCTTGATTTTT TTCATTTTCTGGGTTTGATGATGAGTTTGAAGATGAAGATGAAGATGATTGAAGAAGGATGAAGGGGAAGAAGATGAAGA TAAAAATGATTAAGACATTTGAGTTTTTGTATTTTATAACTTCAATAAATATTGTAATTTATAACTTTAGGCAGGTCTGA AGTGTAGGATGGATGGTATTATGTCATGGATGAGGAAAAAATTGATATGTTGGGTGCTGAAGAAATTTTGTTAGGCGCAT ATAAGATGGTCATGGTTGCTGAAATCGTGGATATGGTTCTAAGTACCTTGTTAGGCGTGGATATGGTTCTAAGTACTTTG AACAATTTTTGAATTAATTAATAATTTTATTTAATTTAGTTATTAATTATTTATGTGGAAATATAAATAAATAAAAATGA TGTGGATAATGCCATGTCATCTATGGCCCGCCACTCAACACTCTTGCCGGAGCTCCGCCCTCCGGTGAGGACTAGAACCA AAATTCTTGCAACTACAGGGAGATATCGGCTAGTTTTTTCCGGGGAGGGACTAAAATCAAAAGTCACTACAAACACAGGG ACCAATTTGACCATTAACCCTCATTACAACTACAAGTCTACAACCAGCCACAGCGAAGAGAGCTGAATTTGCCACCCCAA CCATTAGATTTCACACCCCCAATTTTCGGATTTTTAAGTTCCGAATTATTTCGGAATCTTAGATTCCGAAATTAATTCGT GATTTGTAGTGCAAAATGCATGTAACACCCAAATTTTGAGTGAAAAAATTCTTCGGAAACCTTATTTCCGAAATATTTCG GAAACTTAATTTTCGTAAGTGGGGTGACATTTCTAATAAGTGGGGTGTCAAATCTAATGATCCACACCGAACTCTCCTCT AACAATCAAAACTCAAAACCAAACTGCTCAGATAACGAATACTAACCATTCAAGTTTACCACTGTCACCGGAATCACTTC CTCTTCCTCTTCGCCGCCGCCGGCAAGGCTGGCTGCACCCTCTCACTCAGTTCACTTCCCCCCACCTTCACCATTGACCC AGATATGACAGTGGAGCTCCTCGTCTCTGCTTCTTCCGACGCCACCGGCAAGAATGAGGAGGGCATCAACGACCACAACA TCGTCCTCAAATGGGCTGAATTGAAATGCAGAACGCCGTTTCTGAAGGTCCCTCTCTCTTTGTTTGTTGGCATCGCCAAT TTTGTAAAAGTTTTACTTCTTTATATATATTGGTCCAATAGGATGAGATTACATTACTCGATGGGATAATATAAACAAGC CCATACAATGAAATTGGAATACGTTTATATTCTAGTTGATTAGTCATTAGTAGACAATAGACAACAAAGGTTGAATACGT ACATAATTAGATATACCTATCCGAAGCACAGATAACAATTTAATGATAATGCCTCTACATTAAGTCTGATTAATTAATTC CTTTGTTTGATAGGGATGATTCTCAAGTCTTACAGAGCGTTGTTAACGATGTAATGCAAAAGCTGCAGCTGAGGTACCCT AAAAATCTGGAAGGCCTAGTTGGAATTGAGGAACAATGTGAAGCTGTTGAATGTTTATTGGGAAAAGTTGGAAGAATTGG AGTTTGGGGCATGGGGGGAACAGGTAAGACAACCATTGCTAAAGTCTTGTTTGCCAAACACTTCCCACAATATGACAGTG CATGCTTCTTGCAAAACGTAAGAGAAGAATCAGAAAAGCACGGACTAACACATATCCGTGATAATCTTCTCTCGGAGTTG CTAAAAGAACAAGTTACAACATCCAACTTCTTTGGATCCACATTTGTTGAGAGGAGGCTTAGTAGTAGAATAGTTTTTAT TGTGGTTGATGATGTGGCTAGTTCTGAGCAATTAGAATATTTGTGTGCAGAACTCGGTGAGTTGGGAGAAGGTAGCACTC TGATTGTAACAACAAGAGATAAACATTTGCTTGATGGAAGAGTTGAAGAAATATACGAGGTCAACCCCTGGGACTTTGAA AAATCGCTTGTGCTCTTCAGCTTAGCTGCCTTCAAGAAAAGGGAGCCTGAAAAGGGTTACGAGGACATCTCTCGAAGGGC AGTTGAATATGCAGGAGGCATTGCATTAGCTTTGAAAGTTTTGGGTTCTCATTTTCTTTCCAGAAGTACTAGATTCTGTG AAGCTGAATTGAATTATATGAAGAGAAGTAAGGAATCCCTTAAGAAAATTCAAGAACTGTTGCTAGTGAGCTATAATGGA TTGTCAGGGCGAGAGCAGGCAATATTTCTGGACATTGCTTCCTTTCTCAAAGACGAAAATGAAGATTCCGTCATAAGGAT ACTAGATGCATGTGGTTTCAACGCTACTAGTGGAGTGGAAATACTTAAAGATAAAGCTCTAATAAGTATATCAAAGACCA ATACTATACAAATGCACGACTTGCTACAAGACTTGGCTTTGGATATAGTTCGAAATGATGTAAGAGGCAGCCGATTGAGG GATATTGAACAAATTCGTGATGTGCTTGAAAATGATAAGGTAAGAAAAAAATATACGCCTACTTTTTACTATAAACTGTG GCAAATTTGCAACCTCAATTTACTTATTTCTTAATTGACTTTCCAGGGAATTCCTGAAGTTGAAGGAATAACTTTAGATT TGTCTCAGGAAGTAGATTTGCAACTGAGTGCTGACATATTCAACATGCCTAAATTAAGAATTTTTAGACTATATGTCCCT GCGGGTAAGCAGAAATTAGCCAATGTGCTTTACAATCCTGGATTCCTCCAAAACCATAAGCGAGGTTCTGCTGGATTGAA GTATTTTGAGTGGAACAGATACCCTTCCAAGTCTCTTCCACCAAATTTTTGTGCTAAGTTTCTTGTCGCAATTCGCATGC TGCACAGTGATATTGAAGAACTTTGGCCCGGGACGCAGGTAAAGATAAATACAATTTGCCTGTATGCTTACATTTTCAAT CGACTTAACTAAAGCATCAGATGGCATTCTTTTTGCTTTTTGCAGGATCTGGTGAATCTAGAGACAATTGACCTGAGTGA ATGCAAGCAGTTGGTGAAGCTCCCTGATTTGTCTAAAGCGTTAGAACTCAAATGGGTTTATCTATCCGGATGTAAAAGTT TGTGTGTGGTTCATCCATCGCTTTTATCTGTGGACACACTAGTTACTTTGATACTGGATAGGTGTGAGAAACTGAAGAGT CTTATAAGTGAAAAGCATTTAAGGTATCTGAAGGAGCTCAATGTGGATGACTGTTCAAGCCTAGAGAAATTTGCAATGTC GTCCGATTCAATTAAAAGGCTTGATTTGAGCAAGACAGGAGTTAAAAAATTGTACCCATCAATCGGTCATCTAAGCAAGC TTGAGTGGCTCAATCTAGAAAGTTTGAGACTGGAGAATCTTCCTAATGAGTTGTCGCACCTGACATCTCTAAAGGAGCTG AGGATTTCTAACTGCGGAGTAATTGATGAAGAGAATCTACATGTTCTGTGTGATGGCTTACTATCCTTAAAATTACTACA TCTAAAGGACTGTTACGAGCTGTTTGAACTCCCAGACAACATCAGTGCCTTGTCATCATTGCGAGAATTAAGGCTCGATG GAAGTAGTGTGGAGAAGTTGCCTACAAGCATCAAGCTTCTTGAAAAACTGGAGATTCTCACCTTAGTGAATTGTAGGAAA CTGGAGTTTCTACCTGAGCTCCCGTTGTTCATCATAGAGCTTAACGCTGTCAACTGTACTTCATTAGTGGCGGTATCTAC TTTCAAGACCTTTGCAGTCCAGATGAAAGGGAAGGAGAAACACATATCATTTATGAATGCAATGAAACTAAATGAATCTA CGCTCCTCCAGATTATGGAAGACGTCATGTTCACAATGAAGAGTGCTGAAATGCAAAATATATACGTAAATAAGTTCAGA TTGAATGTCGACAATTTCATTCCTAATAGTGTTGTGGTTTGCTTACCAGGAAGCAGTGTCCCCTCCGGCTCAGGGCAAGG GTCGTTCGCATATCGAACCAGAGGGTCCTCAATTACCATTGAACCTCATGATGGAAGTTTGTCCAAGTGTCTAGGCACCA TTTATTCTGTGGTTCTTTCTGCATCCCCTGGAATCAAGGGGCATGGTGCTAAAATCCAATGCCGAATCTACAGGAAAGAT GGGGAATGCAAGACCACATGGTATGGCAAAGACATCAGTGAATTTGATTCAGATCATGTTTTCGTATGGCATGGTTCAAG TTTCGATGATGCAAAAGTTTTTGAGTTCTTTGTTACAACTGATAGCGGGGAAAACAATGACCAGATCAAAATAAAAGAGT GTGGGGTTCACCTGATGAGTTGCTCGAATTCTGAGCTTCAGAGTTTCTTATGGGAAGCACCGGAATTGGAACCGGAGGTC AAGTCGGAGTTGGGAGTGAAGCTGCAATTGCACTTGGACTTGCAGTTGGACTTGGACCCTGTGCATGAAGCTTTTATGGA ATTGGCGCATGATGGAGTATAATACAGACGTGGCTACTTTGCAGAGGAGCTGGAGATGCAAATAGCTGAGTTAGAAATGA GAGAGAGAAAGGGAGAAAGAAAGAGGCGGGCAGTAGTATGTATGTAGTAGATGCGTTTGCTATTTATTTAGTGACATAAT TTATTAGCTAGTGAAGACCGAGTATCTATCACTGAGATTTATAAATTTTATCACAACGTTTACAATGACACTTTTTAATT TTTATGATGACTTTTGTTCTGTCACAAATTCTGTAACTAATTGACAACTTTTTTAATAGCTTCTGACCAAATTTGTTTGT TCGTAATTTGTTTACCAGGAAGCAGTGTCCCAGAGCAAGGGTCGGTCACATATCGAACCACAAGGTCCTCAATTACCATT GAACCTCCTATCGATCCTTTGTCTCCCTGGCTAGGCACCATTTACTCTGTGGTTCTTTCTCCATCCCCTGGAATGAAGCA GCATCGTGCTAAAATCCAATGTCGAGCCAAGTTTCTGGACGAAGAATACACTACATTTTATGACAAAGACATCGAAGAAT TGTATTCGGATCATGTTTTTTTATGGCATGGTTCAGGTTTCAATTATGGAAAAGTTCATTTTGAGTTCTCAGTTACAACT GATAGCCAGGAAGACGATGAACTGATCAAAATAAAAGAGTGTGGGGTTCACCTCATATGTTTCTCAGATTCTGATCTTCA CAGTTTCGTACGGGAAGCACCAGACTTGGAACCGCAGTTAAAGTTGGAGTTGGGAATGAAGTATCAGTTGTTGTTGGACT TGCTGCAGGGTTATAAGAGAATTAGCACACTGCATAGAGCCGTAGATTATGGAATGCATTGGAATATGGACGTGAATTGG ATAATGAACCATTGAAATTAGAGTTAAAATCACGTCGTCAAGCAGTTTTAACATTAGTTAAGACGGAAGAAGGCAATGCC AAAAGAACCCAGATACCGAATCATCATTAGTTAATGTAACATGCTATGTGTTTCTTTCTTCCTCATATTTTTTGGTCAAC TCTTTCTTTCTTCTTTCAGTCCATTTGCTGGGGCTTCTGCAAACTTGCTTCAATCGAGTTGCTGGGGCTTCTGCGAACTT ACTTGTGAGTCAGGAATAACATGTCATGATTCTTTCTCCCATCTAACTGAAATTAATAAAGATATACTTG
CDS sequence (LotjaGi3g1v0422100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGTCCGATTCAATTAAAAGGCTTGATTTGAGCAAGACAGGAGTTAAAAAATTGTACCCATCAATCGGTCATCTAAG CAAGCTTGAGTGGCTCAATCTAGAAAGTTTGAGACTGGAGAATCTTCCTAATGAGTTGTCGCACCTGACATCTCTAAAGG AGCTGAGGATTTCTAACTGCGGAGTAATTGATGAAGAGAATCTACATGTTCTGTGTGATGGCTTACTATCCTTAAAATTA CTACATCTAAAGGACTGTTACGAGCTGTTTGAACTCCCAGACAACATCAGTGCCTTGTCATCATTGCGAGAATTAAGGCT CGATGGAAGTAGTGTGGAGAAGTTGCCTACAAGCATCAAGCTTCTTGAAAAACTGGAGATTCTCACCTTAGTGAATTGTA GGAAACTGGAGTTTCTACCTGAGCTCCCGTTGTTCATCATAGAGCTTAACGCTGTCAACTGTACTTCATTAGTGGCGGTA TCTACTTTCAAGACCTTTGCAGTCCAGATGAAAGGGAAGGAGAAACACATATCATTTATGAATGCAATGAAACTAAATGA ATCTACGCTCCTCCAGATTATGGAAGACGTCATGTTCACAATGAAGAGTGCTGAAATGCAAAATATATACGTAAATAAGT TCAGATTGAATGTCGACAATTTCATTCCTAATAGTGTTGTGGTTTGCTTACCAGGAAGCAGTGTCCCCTCCGGCTCAGGG CAAGGGTCGTTCGCATATCGAACCAGAGGGTCCTCAATTACCATTGAACCTCATGATGGAAGTTTGTCCAAGTGTCTAGG CACCATTTATTCTGTGGTTCTTTCTGCATCCCCTGGAATCAAGGGGCATGGTGCTAAAATCCAATGCCGAATCTACAGGA AAGATGGGGAATGCAAGACCACATGGTATGGCAAAGACATCAGTGAATTTGATTCAGATCATGTTTTCGTATGGCATGGT TCAAGTTTCGATGATGCAAAAGTTTTTGAGTTCTTTGTTACAACTGATAGCGGGGAAAACAATGACCAGATCAAAATAAA AGAGTGTGGGGTTCACCTGATGAGTTGCTCGAATTCTGAGCTTCAGAGTTTCTTATGGGAAGCACCGGAATTGGAACCGG AGGTCAAGTCGGAGTTGGGAGTGAAGCTGCAATTGCACTTGGACTTGCAGTTGGACTTGGACCCTGTGCATGAAGCTTTT ATGGAATTGGCGCATGATGGAGTATAA
Protein sequence (LotjaGi3g1v0422100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSDSIKRLDLSKTGVKKLYPSIGHLSKLEWLNLESLRLENLPNELSHLTSLKELRISNCGVIDEENLHVLCDGLLSLKL LHLKDCYELFELPDNISALSSLRELRLDGSSVEKLPTSIKLLEKLEILTLVNCRKLEFLPELPLFIIELNAVNCTSLVAV STFKTFAVQMKGKEKHISFMNAMKLNESTLLQIMEDVMFTMKSAEMQNIYVNKFRLNVDNFIPNSVVVCLPGSSVPSGSG QGSFAYRTRGSSITIEPHDGSLSKCLGTIYSVVLSASPGIKGHGAKIQCRIYRKDGECKTTWYGKDISEFDSDHVFVWHG SSFDDAKVFEFFVTTDSGENNDQIKIKECGVHLMSCSNSELQSFLWEAPELEPEVKSELGVKLQLHLDLQLDLDPVHEAF MELAHDGV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 341 | 340 | 2.0E-27 | – | |
| PANTHER | 2 | 341 | 340 | 2.0E-27 | – | |
| Gene3D | 2 | 165 | 164 | 1.6E-23 | ||
| SUPERFAMILY | 6 | 160 | 155 | 9.52E-20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0422100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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