Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0423900 |
| Transcript ID | LotjaGi3g1v0423900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 7 long form isogeny; TAIR: AT2G04865.1 Aminotransferase-like, plant mobile domain family protein; Swiss-Prot: sp|F4IFD0|MAIL2_ARATH Protein MAIN-LIKE 2; TrEMBL-Plants: tr|A0A151SHP6|A0A151SHP6_CAJCA Serine/threonine protein phosphatase 7 long form isogeny; Found in the gene: LotjaGi3g1v0423900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83314338..83316182) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGCTCAATGAAGATCCTGGGCCAATTGATAATTGTGTACTATATGATCAAGATAATCACGTTTCTTCAGCAATTTG GGATGGACATGTAGGTTAATTTTCTTATATATTTATAATTTCTTTAATTCACATAAACTTTTCTTGATATTCATCTTATT GGATTTTGTCATATTTATTCAAACCAAATACACAGGAGCGTGGGGTGCTTAGATGCCATGAACACACTTCATTGCTTGAT CAGTGGAAGCTCACACCTATACAGATTAAGTTAGTTGAGAAGGCTGGTTTTGGTTACCTTCGACTACTTCCTGCTATGAG CCTTGACAATGCACTCATAGCAGCTTTGGTTGAGCGGTGGAGGAGAGAAACAAATACCTTTGACTTAAGTGTTGGAGAAT TAACAATAACCCTTGAAGATGTAGCACTATTACTGGGATTGGCTATTGATGGAGAACCTGTGATAGGTCCAATAAGTGCA CCAGGTTCAGTTTGTGAAAAACTACTAGGGAGAGTACCAGAGGACTTGAATGGAGGAATGGCGAATCTTACTTGGCTTAA GGAATTCTTTTCTGAGTGTCCTGAAGATGCATCGCCGGAACAAACCGAGTGCTGTACTCGTGCTTACCTTCTATACCTGG TAGGCAGTACAATATTTTCAACAACAACTGGGAACAAAGTCCCTGTTATGTACCTTTCTTTGTTTGAGAACTTTGACAGG GCAGGAAAGTTTGCTTGGGGTGCAGGCGCATTGGCATTTTTATATAGAGCACTTGGCAATGCATCCCTTAGATCTCAAAG CACCATTAGTGGCTGTTTAACTCTAGTTCAGGTTATCAAATTACTTCCCTCTAGTCTCTACACTCAACTGGTGATAGTTT TAGTTTGAAATCTCACTGATTAGTTGGTCTTTTTTTAGTGTTGGAGTTACTCTCGCCTCAATGTTGGACGGCCAAAATTT AATCAAGAACCTGATAACATTTGCTTTCCCTATGTGCTTAAATGGAAAGGGAAAAGTGGTTCTAGGACAAAATGTAATGC AGTGTCCTACAGGAAGGCTTTGGATTCTCTTAAATCTTGTGATGTAAGTGTTAATAATGTTGCTCAATTGACATTTTTTT AGGCAAGAGAAAATAGTAAATCTGCTTTAGTGTTAATACACAGGTTCACTGGCTTCCTTACAAGGATATGGACTTTACAG CCATACCAGAAGATATAAAAAGTTGTCTGAATTTACGGGCATCTAGAACTATGCTATTGTGTTTTGACAAGGCAGAAAGG CATCTTCCAGATCGTTGCTTAAGGCAATTTGGCATGTACCAAAACATCCCGAAAGATGTGGAACGGTGGGAAAGGAAGAA TCGTATAGTGGATCATGGGATAGGCCTGAAGGGGAAAATGGACATGGCTCTAAAAGAATGGTCAGAGCGTTGGCTTCATA TTGCAGAAGGTGGTGAAATTTCAGATGAGGGTGAGTACATGCAATGGTACCAGAAGATTACTCGGAAATACATTGTGAGA GTCACATCATCTTTGGAGTCTGAGTATCAGAGAACCGTATGTCTTCGCCTAGTTATCATTATTTATCTTTCTCTTGAACA TGTAATAAATACTTGACTTTCACATACTATTACAGGTTACTGCGATGAGGGAAATTGCAAACATTGCTGATATAATCTCA ACAGAAGGGTTGGATTCTCATAACAAAGATTTACTTGATGAAGTGAAGAGCCTTGTGCACAAGTGCTTAACAGAGCAGTT TGAAGAAATACCAGAGGAGAAAGTGAGTAAGAAGTGTAGTCGGAAACGTAGGCAAAATGATCACCTAGGTACGGAGTATG AATAG
CDS sequence (LotjaGi3g1v0423900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCTCAATGAAGATCCTGGGCCAATTGATAATTGTGTACTATATGATCAAGATAATCACGTTTCTTCAGCAATTTG GGATGGACATGAGCGTGGGGTGCTTAGATGCCATGAACACACTTCATTGCTTGATCAGTGGAAGCTCACACCTATACAGA TTAAGTTAGTTGAGAAGGCTGGTTTTGGTTACCTTCGACTACTTCCTGCTATGAGCCTTGACAATGCACTCATAGCAGCT TTGGTTGAGCGGTGGAGGAGAGAAACAAATACCTTTGACTTAAGTGTTGGAGAATTAACAATAACCCTTGAAGATGTAGC ACTATTACTGGGATTGGCTATTGATGGAGAACCTGTGATAGGTCCAATAAGTGCACCAGGTTCAGTTTGTGAAAAACTAC TAGGGAGAGTACCAGAGGACTTGAATGGAGGAATGGCGAATCTTACTTGGCTTAAGGAATTCTTTTCTGAGTGTCCTGAA GATGCATCGCCGGAACAAACCGAGTGCTGTACTCGTGCTTACCTTCTATACCTGGTAGGCAGTACAATATTTTCAACAAC AACTGGGAACAAAGTCCCTGTTATGTACCTTTCTTTGTTTGAGAACTTTGACAGGGCAGGAAAGTTTGCTTGGGGTGCAG GCGCATTGGCATTTTTATATAGAGCACTTGGCAATGCATCCCTTAGATCTCAAAGCACCATTAGTGGCTGTTTAACTCTA GTTCAGTGTTGGAGTTACTCTCGCCTCAATGTTGGACGGCCAAAATTTAATCAAGAACCTGATAACATTTGCTTTCCCTA TGTGCTTAAATGGAAAGGGAAAAGTGGTTCTAGGACAAAATGTAATGCAGTGTCCTACAGGAAGGCTTTGGATTCTCTTA AATCTTGTGATGTTCACTGGCTTCCTTACAAGGATATGGACTTTACAGCCATACCAGAAGATATAAAAAGTTGTCTGAAT TTACGGGCATCTAGAACTATGCTATTGTGTTTTGACAAGGCAGAAAGGCATCTTCCAGATCGTTGCTTAAGGCAATTTGG CATGTACCAAAACATCCCGAAAGATGTGGAACGGTGGGAAAGGAAGAATCGTATAGTGGATCATGGGATAGGCCTGAAGG GGAAAATGGACATGGCTCTAAAAGAATGGTCAGAGCGTTGGCTTCATATTGCAGAAGGTGGTGAAATTTCAGATGAGGGT GAGTACATGCAATGGTACCAGAAGATTACTCGGAAATACATTGTGAGAGTCACATCATCTTTGGAGTCTGAGTATCAGAG AACCGTTACTGCGATGAGGGAAATTGCAAACATTGCTGATATAATCTCAACAGAAGGGTTGGATTCTCATAACAAAGATT TACTTGATGAAGTGAAGAGCCTTGTGCACAAGTGCTTAACAGAGCAGTTTGAAGAAATACCAGAGGAGAAAGTGAGTAAG AAGTGTAGTCGGAAACGTAGGCAAAATGATCACCTAGGTACGGAGTATGAATAG
Protein sequence (LotjaGi3g1v0423900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELNEDPGPIDNCVLYDQDNHVSSAIWDGHERGVLRCHEHTSLLDQWKLTPIQIKLVEKAGFGYLRLLPAMSLDNALIAA LVERWRRETNTFDLSVGELTITLEDVALLLGLAIDGEPVIGPISAPGSVCEKLLGRVPEDLNGGMANLTWLKEFFSECPE DASPEQTECCTRAYLLYLVGSTIFSTTTGNKVPVMYLSLFENFDRAGKFAWGAGALAFLYRALGNASLRSQSTISGCLTL VQCWSYSRLNVGRPKFNQEPDNICFPYVLKWKGKSGSRTKCNAVSYRKALDSLKSCDVHWLPYKDMDFTAIPEDIKSCLN LRASRTMLLCFDKAERHLPDRCLRQFGMYQNIPKDVERWERKNRIVDHGIGLKGKMDMALKEWSERWLHIAEGGEISDEG EYMQWYQKITRKYIVRVTSSLESEYQRTVTAMREIANIADIISTEGLDSHNKDLLDEVKSLVHKCLTEQFEEIPEEKVSK KCSRKRRQNDHLGTEYE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 472 | 467 | 1.5E-208 | – | |
| PANTHER | 6 | 472 | 467 | 1.5E-208 | – | |
| Pfam | 61 | 407 | 347 | 2.5E-94 | ||
| MobiDBLite | 477 | 497 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0423900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…