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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0429200 |
| Transcript ID | LotjaGi3g1v0429200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein EARLY FLOWERING 3; TAIR: AT3G21320.1 EARLY FLOWERING protein; Swiss-Prot: sp|Q9SNQ6|HD3B_ORYSJ Protein HEADING DATE 3B; TrEMBL-Plants: tr|A0A0B2PPM7|A0A0B2PPM7_GLYSO Protein FAR1-RELATED SEQUENCE 11; Found in the gene: LotjaGi3g1v0429200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:84038498..84042668) extracted from Lotus japonicus Gifu genome v1.2.
TGAAAGATTTCAACATGTGGTAGCAATTCACTTACCTCTTTGGCTCTTCCTTGTCCTTCGCCAAAGCAGATACACACAAG AGTTTTTGATGAGAGACCCGGTCACACTGCTTCTGTCTCCAATCATGAATCATACCATTTTAGCATCACTCTCCCTCATT GATGAGTTTTTTCTATCCAACATGGTAGGGTCATCACTCACCATGCAAGTGCAGCTGTTCTGAACAAAACTTGGGTCCAT AATACTACCCCATAACAAGTTTTGCTCTCACTTTCTAGTTTTTTTATTTGCTTTTATTGGCAGTGCCTCGTGGATTCAGG GTGACCCTTTGTTTCTATTGAATCTATCCTCATTCAATCTTTTTTCTTTAATATCTTTGATCTTTCCTTCACTTTTGTAC TTGCTGAGTATTGTCTCCTTGTGTTCTGGCGCATTTCTAAGTGAATTCATGAATTTGTTGCTTGCCTATCATTGGTTTTC AGCTGAAAAGTTCAATATTCTAGAAGTAGGTGCCTTTCGATCTTTGTTTTTCTCCTCTTATTTCTAATGTGTTCTTCCTT CCCCTTATTAATAATGTACGATCAGGAAAACCTCTTTGAAGTTGGTTAATCTGTTTTTTTTTGTGTTGCGCCGCAAATTG CCTAGTGGATCGATTGATTTGTTTTCATAGGGTTGGAATTTCTTGTCCTAACAGAACTTAGAGATTTGAGTTTTGAATAC TCCTCCTGAAGTGGTTTTTCCAACTGACAAACACGTGCTGGATTGACAATTTTCTAAGAATGGAAAGGGAATTTTTGTGA AATTTTTGTTAGTGAATAGGGTGTAGAAAGAGGAGTAAAGATGAAAGGGGCAATTGGTGAGGGGAAGGAGATGATTAGCC CAATGTTTCCTAGGTTGCATGTTAAAGATGCAGAGAAAGGAGGGCCAAAAGCACCTCCAAGGAATAAGATGGCTCTCTAT GAACAATTCAGCATCCCTTCTTCTCAAGGTCAATTTGCATCATCAGAATCAGGATCACCATCCTTGTTTCCTCTCCTGCT AAGAAACTGCACACTTCCTCCAACATCTACCCAAGTGAGTCAAGTAATGTTCATTCAATTTTTGCCTTTAATCGATTAAT TAATAGATGGAAAGAAACTCACATTGTTTTTCCAATCTCTCCATAAGCTTACCATGCATGTTTAGAAACTCGTTCGGAAA CCACGGTGAAACCAAAATCATAGTGGACAACAACTTCCTTTAGCTTTTGCTTCTGTCCACTGTGATTTTGTCTTGAGTTT TTCGAACAAGTAGAAGCTTGAATGAAGGCACTAAGTGCCATAATCTTATAATACTACTTGACATTGTAACCAGAAGAAAA TAGAAGTTTTTATGTATAGTACATAGTAAAACTTTTGAGAATAATTAAGCTTGGAATCTTTCAACATAGTTCAAGTAAGA CTGTAAGAGTTAATAAAAAGTACTTAACCCTTAAATTGATATTGGAGCACACATCTTTTGTCTCTCTTTCTTCTTTTGTA ACCTACAAACGGCCAGAATTTAAACTTCTTGTTCTCATTGTCACTTACTGGTGTATTTAATTTGTTTCAGCAGGGTAGTT TCCTCACTAGTAAGAATTCCCTGAAAACACTTGGTGAGGATGCTTTTATGACTTCTGGTTCTGCCTGTGAGAGAAATTCA AGCTGCGGCATCATTCAAAATGATAAAGATGATGATAAACTCGCAAGAAATAATTTGAACTGTTCGCTCAAAAGTCTACA CTCATTTAGAAACAAGGTGAATTCATCTGAAGCCATAGATCTGAATTCAGCAAAATATGGGAAGAACCAGATGGAAGAGC CTATAGTTGTGAGACAAATTGGTCTGAAGCCAGAGGAAGGGCCTCCTCACCCATTAGATGGTTTTGGTGATATGAGAGAT GATGAATCCTTAAACTCATTGGTGAAAGGAAGGAGTTCTACGTCAATGAAGAGAGAACATGGATCATTGAAAGGAGAAAT TAGAAGTATTTCAGTAGATAGCTTAAAAACATTGCAAGGTAGGAATGTTCATACACATGAAGAGCATGCAGCTTTTGAGG ACAATAAAGATGAGGAGGCTTATAGGGATCATGATACCTTAAATAAACCAAGTTCAGAATGTTTGTTTGGGAGGGATATT TCCCCTGACAGTGTTGTAGGAGTTATAGGTGAAAAGGAATTTTGGAAAGCAAGAAGAACTATCATCAAGTAAGTTTGTCT GTCTAGTATTATGTGTTTATGATTTGGCCTTTCTTTTTGTTAAACTTTTTGTATTTTCCTTTTTAGGGAAATTTGGTGGA ATTAGGGAAATTTTGTAGGATGATGGGTTAAGATTTGTAACATTGGGATATGTATCTGACCAGGCAAACAAATTTACTTA TTTGAAAATGAACTCAACCTAAAGAAATCATGGTAGTTGAGATGGAAATAGAGAAAACATCTACTGATCTAGACATCATG TCCAAGAGAAAGAAATGCATTGCACTTCTTGAGACTAAGCACTCATAATTTCACTAGTTCATCTTTTTGTACATTCAAAT AGTACATACATCCAACAGTCACCAGAGTGAGAAAATAAGAGAAGAGCTCACGTTATAGATGTGATATGTGATATACTAAT ATATGATAGATGTGATAATAAGAGAAGATTAAAGAAAAAATGTGGTGTCAGAAGGGTGTCTGCGCTGTTTGTATGTCTAT CGTTCCTGTTTCAAGTTTATGTGTTTTGCTATAATCTTAAACCTGATACTTATATTGCTGTATGCAGTCAACAGAGAATC TTCCTCATGCAAGTGTTTGAGCTCCACAGACTGATAAAGGTAATTATTGACTTATGTGTGCCTGACTTTCACTCGGATTA TGATATGAGAAGCAACTAAATCATTTCTTAATAGCAGGTTCAGAGATTAATTGCAGAGTCACCCCATTTATTGCTTGGAG ATAACTCAATGCTTAACAAGCCACAACTGAAAACATCATCTTCAACCAAGAAATTACCATCACCATCCACAGTTATTAAA CTCGAAAGCAAGTCTGAGAGAACCTCTACTCCTGAGCCTGCTAAAAACAATGCAATTGGGATGTTTCCACTTCCTTCTCC AATCAACAACATCATGAGCAAAAGCCACAGTAACCAGTTATCAAATTATAGCCATCATTTAGATATAAACTCCCCAAGCT GTGTCTACCCTCCAGTTCCACCAGTAAACCAGTGGTTAGTTCCTGTCATGTCCCCATCTGAAGGCCTTGTGTACAAGGCA ATCATTGCTCCAAATGCAGGCTTCATGGCACCGCCACCAACACCACCACCACCACCAATCATTGCTTCATCTTTACCCCA GTTCTTACCACCACCATCATTAATGCATCATCCTTCTATGTCTGTTGAGAAAATGGGGCAGTCTAATGGTCCTGATCAGA ACCACCACTCCTCTGGAGAGGTCAATTCTGCCATGTTATACCGGAGCTCATCTAACCTGTCCACGCAGACTAGCCGAGTG ATGTCGAGAAATATTTTAACTCATCATTCAGTGGAAGATAAAGAATTGCAGAGAAGTACAGCTAGTAGTCCTCCTTCCAA GAAGATGAAAGGAGATGAACTTCCTTTGTTTCCTGTGGAACCGACATCTCGGCTATCAGCAGAACAGAACACACCTGTTG AAAACCTCCCGCGAGTGATCAAAGCTCTTCCTCATAATCCCAAATCAGCTACTGAATCAGCAGCCAGAATATTCAGGTCA CTACAAGAAGAAAGGAAATATTTGTAACTAGTCTATCTCAATGTGTTAGTCAAGTCTAGATATTCTAATTTGATAAGTAA CAATACACACTAACGCTGTACCAATGACCATTTTCTTGGATAAATATGTTGAGAACTCTCACACACACATTGCTTACATT GCTTAGAAATATGGCAAAATAAATCATTATACGCGGTAGATCAATCCTACTTCTAAGTTAATTTTTGAATTAAAGTTCCC TCTAACTTAAATTCTAAGAAAATATAGAGGTTACAAAGTTTCATGAAGAAACTACAATATATATTAATGGGGTGATAATA ATTTGTTAAAACTATATATGGTTATAGTCAAGTTTTTTAAGCATTTAGTCAAGAGTTTGACCCATAGGCGATGTGTATAG AGAAATATTTG
CDS sequence (LotjaGi3g1v0429200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGGGGCAATTGGTGAGGGGAAGGAGATGATTAGCCCAATGTTTCCTAGGTTGCATGTTAAAGATGCAGAGAAAGG AGGGCCAAAAGCACCTCCAAGGAATAAGATGGCTCTCTATGAACAATTCAGCATCCCTTCTTCTCAAGGTCAATTTGCAT CATCAGAATCAGGATCACCATCCTTGTTTCCTCTCCTGCTAAGAAACTGCACACTTCCTCCAACATCTACCCAAGGTAGT TTCCTCACTAGTAAGAATTCCCTGAAAACACTTGGTGAGGATGCTTTTATGACTTCTGGTTCTGCCTGTGAGAGAAATTC AAGCTGCGGCATCATTCAAAATGATAAAGATGATGATAAACTCGCAAGAAATAATTTGAACTGTTCGCTCAAAAGTCTAC ACTCATTTAGAAACAAGGTGAATTCATCTGAAGCCATAGATCTGAATTCAGCAAAATATGGGAAGAACCAGATGGAAGAG CCTATAGTTGTGAGACAAATTGGTCTGAAGCCAGAGGAAGGGCCTCCTCACCCATTAGATGGTTTTGGTGATATGAGAGA TGATGAATCCTTAAACTCATTGGTGAAAGGAAGGAGTTCTACGTCAATGAAGAGAGAACATGGATCATTGAAAGGAGAAA TTAGAAGTATTTCAGTAGATAGCTTAAAAACATTGCAAGGTAGGAATGTTCATACACATGAAGAGCATGCAGCTTTTGAG GACAATAAAGATGAGGAGGCTTATAGGGATCATGATACCTTAAATAAACCAAGTTCAGAATGTTTGTTTGGGAGGGATAT TTCCCCTGACAGTGTTGTAGGAGTTATAGGTGAAAAGGAATTTTGGAAAGCAAGAAGAACTATCATCAATCAACAGAGAA TCTTCCTCATGCAAGTGTTTGAGCTCCACAGACTGATAAAGGTTCAGAGATTAATTGCAGAGTCACCCCATTTATTGCTT GGAGATAACTCAATGCTTAACAAGCCACAACTGAAAACATCATCTTCAACCAAGAAATTACCATCACCATCCACAGTTAT TAAACTCGAAAGCAAGTCTGAGAGAACCTCTACTCCTGAGCCTGCTAAAAACAATGCAATTGGGATGTTTCCACTTCCTT CTCCAATCAACAACATCATGAGCAAAAGCCACAGTAACCAGTTATCAAATTATAGCCATCATTTAGATATAAACTCCCCA AGCTGTGTCTACCCTCCAGTTCCACCAGTAAACCAGTGGTTAGTTCCTGTCATGTCCCCATCTGAAGGCCTTGTGTACAA GGCAATCATTGCTCCAAATGCAGGCTTCATGGCACCGCCACCAACACCACCACCACCACCAATCATTGCTTCATCTTTAC CCCAGTTCTTACCACCACCATCATTAATGCATCATCCTTCTATGTCTGTTGAGAAAATGGGGCAGTCTAATGGTCCTGAT CAGAACCACCACTCCTCTGGAGAGGTCAATTCTGCCATGTTATACCGGAGCTCATCTAACCTGTCCACGCAGACTAGCCG AGTGATGTCGAGAAATATTTTAACTCATCATTCAGTGGAAGATAAAGAATTGCAGAGAAGTACAGCTAGTAGTCCTCCTT CCAAGAAGATGAAAGGAGATGAACTTCCTTTGTTTCCTGTGGAACCGACATCTCGGCTATCAGCAGAACAGAACACACCT GTTGAAAACCTCCCGCGAGTGATCAAAGCTCTTCCTCATAATCCCAAATCAGCTACTGAATCAGCAGCCAGAATATTCAG GTCACTACAAGAAGAAAGGAAATATTTGTAA
Protein sequence (LotjaGi3g1v0429200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGAIGEGKEMISPMFPRLHVKDAEKGGPKAPPRNKMALYEQFSIPSSQGQFASSESGSPSLFPLLLRNCTLPPTSTQGS FLTSKNSLKTLGEDAFMTSGSACERNSSCGIIQNDKDDDKLARNNLNCSLKSLHSFRNKVNSSEAIDLNSAKYGKNQMEE PIVVRQIGLKPEEGPPHPLDGFGDMRDDESLNSLVKGRSSTSMKREHGSLKGEIRSISVDSLKTLQGRNVHTHEEHAAFE DNKDEEAYRDHDTLNKPSSECLFGRDISPDSVVGVIGEKEFWKARRTIINQQRIFLMQVFELHRLIKVQRLIAESPHLLL GDNSMLNKPQLKTSSSTKKLPSPSTVIKLESKSERTSTPEPAKNNAIGMFPLPSPINNIMSKSHSNQLSNYSHHLDINSP SCVYPPVPPVNQWLVPVMSPSEGLVYKAIIAPNAGFMAPPPTPPPPPIIASSLPQFLPPPSLMHHPSMSVEKMGQSNGPD QNHHSSGEVNSAMLYRSSSNLSTQTSRVMSRNILTHHSVEDKELQRSTASSPPSKKMKGDELPLFPVEPTSRLSAEQNTP VENLPRVIKALPHNPKSATESAARIFRSLQEERKYL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 78 | 78 | 9.6E-155 | ||
| PANTHER | 1 | 78 | 78 | 9.6E-155 | – | |
| MobiDBLite | 1 | 36 | 36 | - | – | |
| PANTHER | 84 | 594 | 511 | 9.6E-155 | ||
| PANTHER | 84 | 594 | 511 | 9.6E-155 | – | |
| MobiDBLite | 324 | 367 | 44 | - | – | |
| MobiDBLite | 326 | 363 | 38 | - | – | |
| MobiDBLite | 456 | 487 | 32 | - | – | |
| MobiDBLite | 470 | 487 | 18 | - | – | |
| MobiDBLite | 516 | 542 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of photoperiodism, flowering | Any process that modulates the frequency, rate or extent of photoperiodism, flowering. |
Expression pattern of LotjaGi3g1v0429200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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