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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0431200 |
| Transcript ID | LotjaGi3g1v0431200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; TAIR: AT5G18800.1 Cox19-like CHCH family protein; Swiss-Prot: sp|Q8LGE7|NDA8B_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B; TrEMBL-Plants: tr|I3SL61|I3SL61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0431200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:84291487..84294019) extracted from Lotus japonicus Gifu genome v1.2.
TTGGGCATGGCGAGCGCTGTGGATGCTGCAGGAAACCCGATCCCAACATCGGCGGTGTTGATGGCATCGTCGAAGCACAT TGGGATAAGGTGCCATTCGGAGAATTTGGAGTTTCTCAAATGCAAGAAGAAGGATCAAAACCCTGAAAAGTGTCTCGATA AAGGCCGCGACGTTACTCGCTGTGTCCTTGGCCTGTGAGTTTTTCCTTTTCCCCCTCAAAATGTTAGCTTTTGCTAGTTT TTCTTGTGTCTGATGAAATGCTTTGTAGAAGGGTGGTTGAAATTATTTTTCAAATTTTATTTTTTTGATGATTTTCAAAT GGTGAATGATTCACCAATTCCAATATCTTTACAAAATAGAGGTAGCTAGAGTAGCAAAGAAAGCATTTCTGAAATTGAGA ACCTGTGTTTTTTGCCTTATTTGTAGTTGGTTGTGTATCTGTCAATGTGTAATATTTGATAAGGTGGTGTTATATTACAA AGATACTTGCATACTGATTTACTGTTTATTATCAGCTCAAGGCCTGCTGGTGAAGGTGTTTCATTTATTTACTAGAAAGA AATTGAGTGTGTGAGCCAAGTAGCATTGGTCAAATTATAGTCATGGTTCTGTTTTTGTTTTTGTCTCCTTTCATGGGTTT ATTGGCTTGAAATTTTATCACTTTTCATGAAGATCACAAGTCATGGAATGGCTTTATGAACCCTCATTGTTTGTATTCAT CAGCACATCATCTACTTTTGTTCTTCTATATTTTGGACTATTTATTGAAATTTCTGTTTTGTGCGTAGAACCTTAAAGAA AGGCATTCAATTATCATACTATTCTTTCAAAAATATTAAATAGGCAGAACATTTACCCTTGAGTCTAGCTAAATAGTTTC AAAGTACTGTCTTTTTTTAATCTCACTGCATGTCATTACCCTAATTGTTGTATTTTTTTTAAATACAAATTAGATACTAA GATCATGGTGAGGGAAGTTGGGCACTGTTGCGCTTCTAAAGTCTAAATTGATATACTAAGACCATTGCGTATATCATTTT TTTCCCTCTCAGAGGCATTGTTGTTTATGGTCCTTAAGCGTCTATATTTAACCTGAGATTTAATATGTTGGCAAGTCGCA ACAATGTGTTTTGTCAGTTGTCAGTGTATAGATATAATTTTTCTGCTCACGTTGAAGTTTGGTTTCTAATTCTAACCAAG CTGCTTCGAAGGTCACTGTGTTTATACAACTAAAAGTGATTGAGTACTATAGTATGTTTTGTATTAATAGCATCTGAATA CTTTCTGTTTTGAAAATTGAAGCATAAAATATAGTGTTGTCTACCTCGCTAGTTTCTTTAACTTAGGGAACTGAGGGGTG GATGAGTAAAGATTTGACTTCTCATCCTCTGTAGTTCCTATTAATCTTGTTTCTAGGACGGGTTTAACAAGGAGTATGTG AATGTTTCACTGGAAAAAAAGCGCATAAACTGAGATCTTATATACTTTCATATATCCTTTCCCTTTAGCCATGAAAATAT GTTATATACCCTTTCTTTTTTCCTTCTAATTTTTTACTTGATAAATGGATGTATTGAATGGTGATAATTTAGTAGATATT AGAATTACTGAATGAGAAACAAATAGAATCTGGCTCTTTGCTTCTAGATGCTACATTAATATTAGAACTTAGAAGTTGTC TTGTATATTTGAACTGTCTCATTAGTTTTTACAGAAAAATTCTCTTGTGAGGTTGTTTTCATATCTAATTATCATGTAGG TTGGAGTACATCATCTCTGTTTATTGCTGATTTTATCCTTTATTGCTAAATCCATGGACCGTACAGTTATTTTCATAAGT CATAACCAACGCCTTTCGTAATTTGTTATTAGAATCAGTATCACATCATCTCTTAACTTGGATGACCATATATTTGATGT ATCCTATTATTATTGATCACTGCCTCCTGCCTGCAGTAGGCATTGCTCTAATTTTTCAGATATTAAAGGTTGCAACAAAC ACATTGTCACATTGTATTGTAAGACTCTTTGGCCTTTGAGCGGAAGCATTATTTTTGTTTTTGGTGGAGAGGAAGGAAAT ATTTATGGTCATTATAACTGTTCGATGCATTGTTTGTCACAAATAGTTTAATTTCTCCGTATCTGCACTTGTGTTATGTG CACAATGATACAGACAGGTTTTTATGATTCATGTCTATCTGATTAAAGGTTTTTCTTTTCTTTTTCTTTTCAGATACCCA TGCTTCTTATGATTTATTTGATATGCTATGACTGAGTTTACAGTCAGATGACTCCTGTGTATTTATAGCTTTCTATTGTA GTTTAAAGCATTCTCTGTTACACACAAAGGATCTTCTAAAAAAAAATCTTAATGATAGTGACTAAATGCTTGTTCTGCAG TCTGAAGGATCTACACCAAAAGTGCACGAAAGAGATGGATGATTACGTTGGCTGCATGTACTACCATACAAATGAATTTG ATTTGTGTCGTAAAGAGCAGGAAGCATTTGAGAAAAAGTGTTCTTTGGAATGA
CDS sequence (LotjaGi3g1v0431200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAGCGCTGTGGATGCTGCAGGAAACCCGATCCCAACATCGGCGGTGTTGATGGCATCGTCGAAGCACATTGGGAT AAGGTGCCATTCGGAGAATTTGGAGTTTCTCAAATGCAAGAAGAAGGATCAAAACCCTGAAAAGTGTCTCGATAAAGGCC GCGACGTTACTCGCTGTGTCCTTGGCCTTCTGAAGGATCTACACCAAAAGTGCACGAAAGAGATGGATGATTACGTTGGC TGCATGTACTACCATACAAATGAATTTGATTTGTGTCGTAAAGAGCAGGAAGCATTTGAGAAAAAGTGTTCTTTGGAATG A
Protein sequence (LotjaGi3g1v0431200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASAVDAAGNPIPTSAVLMASSKHIGIRCHSENLEFLKCKKKDQNPEKCLDKGRDVTRCVLGLLKDLHQKCTKEMDDYVG CMYYHTNEFDLCRKEQEAFEKKCSLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 105 | 103 | 8.9E-48 | ||
| ProSiteProfiles | 26 | 67 | 42 | 12.492 | – | |
| ProSiteProfiles | 68 | 106 | 39 | 14.42 | – | |
| Pfam | 71 | 103 | 33 | 1.0E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitochondrial electron transport, NADH to ubiquinone | The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I. |
Expression pattern of LotjaGi3g1v0431200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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