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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0436000 |
| Transcript ID | LotjaGi3g1v0436000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Arginase family protein; TAIR: AT4G08900.1 arginase; Swiss-Prot: sp|P46637|ARGI1_ARATH Arginase 1, mitochondrial; TrEMBL-Plants: tr|G7JFU3|G7JFU3_MEDTR Arginase family protein; Found in the gene: LotjaGi3g1v0436000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:84750356..84755891) extracted from Lotus japonicus Gifu genome v1.2.
ATCAAGTAGAAGAAGTGTAAGTGCCCTCCAATTATAAATACTGAGACTAGGCATTAGCTTAACCAAGAGCATGTTTCTTA GATAGTTCAAGTTCTAGTGTTCATTAATTTCTACAGGCAGAGAATTGGTGAGATCAAACAATGTTTCCTAAAGGTACTGC TATTTTGCTCATATATATCCAAATTAAAGATGGCCAGGCCCAGATTAACATTTTGATTTAGTATTTTAACATTGTGGTTA AACAAATTACTTGATGTAGGGTTGAGTCACTTGCTTGTGTATGCTGAGTTCTGTGTTTTAGGAAGTTAATCTGCCAAATT TCTGTGTACAGTTACAGTATCATTGAACTGCATGATAAAATCCATAGTCAAAATCGATTTGCAAATCTCTGTCCACTTCA AAGTTAAATTGATCATTGGGATGTACCATGTACTATAACTAAAATTTTCAGAACTAGATATTAATGACTCTGTTCTTTTA TTTAATTCAGGAATGTCAACTATAGCCCGCAGAGGCATCCATTACATGCAGGAAATACAGGCAGCAAAAGTATCTCCTGC TTCCCTAGAGCAAGGCCAAAAGGGTGTGATAGAAGCTTCCCTAGCACTTATTCGAGAAAATGCAAAGCTCAAGGTAAATC ATTTATGGTTCCTTAATGTTTTGGGTAAAAATGCAGTGGTGTTAATTAGGATTTGTAGGTGCTCGGTCTTTGGCAGCCTA TTAGTGGAAGTCCCTGATCCCCTGTCTCCCTAACAGTTTTTGTGTCATGATTTTGATTATAAGCTTTGAAAAAAATAAAA AAATGGATCTTAAATGCAGAAATTGGTTTTCTCGTGCAGGGAGAACTTGTGCGTGCTTATGGAGGCGCCGTAGCAACTTC ATCTCTTTTGGGAGTTCCTTTGGGACACAATTCTTCATTCCTTCAAGGGCCTGCATTTGCACCTCCTCACATTAGGGAAG CTATTTGGTGTGGCAGCACAAACTCAACAACTGAAGAAGGTATAGTCATATATATGGTTTTCCTAAGGGACAAGCCTTTA ATTTCAGAAGGACACAAACTTCTTATCAAATTAGATAAACTTAATATCTGATTTGAACTTTGAAATTGTAGATATTATTA ATTTCTTGAGGTTCTTACTTCTTAAGCATATTGCCTTTCAAAAAAAAGCATATTGGACTTTTGTGTTTTGGTATTTTTGT TACCATAAACATGTGCTTTCCCTCCTCAATCTTCTGGTTGTATTCAATCTCTAATAAGGTGAAGTGTTCACGAATCAATT TCATATCCAATTTGTTGAGCTTATCAAAAAAAAAAATATCCAATTTGTTGAAGCCTCTAAAAAGAAAAGAGTATATAACC ACCTTAAACTTTACCCCTCTTGCAAATACATACTTTGAACTTTTAATTATGATGAAGTGTTTTTCAAAGAACTTAGATGA AGTACTATGGTTAGTAAACATAGATTTCTTATCTATTTCTCTTCTCTTTCAATTCTATCCTATCTTTTACTTTCTCTCTC TCTCTCTCTTCTTTTTACCTTTCTTTTCTTTTCTTTTCTCTTCTCTTCACTTCACTTAATTTCCATATTGGAGGGTGAAT CGACTTAATTCGGAATGAACTAGCCAAAATATAAAACATGTGATAAAATAATAATGACATGACAGTATGTATGTTGTATA TATCACTGTCTTGTGTGGCCATTGAAATATCTAACACTTGTGGCTGTAACCACCTCGGAGTCGTTTGTGGTTGTGTAGTT CTACTTCTAAGGGGTAAGCCCCTCCATCTTAAAAAAATAAAATCAACACTTAGAGCCTTTAATCAAATAATTATGTATGA TAATCATGAGAAATATAGCACGATTCTTATTTTGCAGGAAAGGATTTAAGGGATCCACGAGTGCTAGCTAGTGTTGGAGA TCTTGCTGTCCAAGAAATTAGAGAGTGTGGAGTAGATGATCATCGATTGATGAATGTAGTTAGTGATGCTGTCAAGTTAG TCATGGAAGAGGTAAATTCTCAACTTGTGAGCTAATGCTTTTACCAATTTCACAAAATTTGGAATTAAAAATTTACACTT TCTACAATATGCAGTACACTTTATTTTTGTATTTGACATTATGATTTATGTTTCTAAAAAGCCAAAATGAATTAAACAGA AGCAATAGAGTGCTTCAACTCATACAAGAAAAGGGAACCAGGTAGAATATGTTTCCACTTTCAAGCTTATGAACAAACAG TACACAGCCTAAGGTACAAGCATAAAGCCATAAAAGACTAGCCCTGAAACTAAATTAAGGGAAAAACTAAAACCACCCCC CTCACATCTAACAACACCATCCTCTTTTGAAGAAAGTCTAAAATACCCTGCCTTCAAATCTTTCTCACCATCCCCTTCTT CTCCTTCCTCACCTGGGCTTTCTTATCTCCTCCAAACCTTTATCTTTCTCCACATTCAATCTATCAAACAAATCATCACT CCTTTAATTTGCATCAACATAAGTTTCTTCCAGTGCATACAACACATGACCATCTTCTAAATGCAACCTCCATGAGATGT TAATCCTTATTAATGAATTAGTTAATAAATATTTTTTGACAAAATTGTGGCTTCTTGAACAAGAGTAGAGAGGTATTCAT GTCTGGCATGAAGAGTCCAACAGTTACAGTTTCGTGGATCTTGTAATTCATTCTTGAATTTATTTTCCTAAATACTTCAC TTCTATTTGAATGCTTTTTTTGTGGAAATATCAAGATGTTTAGCATCATATCTACTTACAAGAGTTATCATAGTTTCTGG TAATTTTCTAATATTTGAACTAGCTAGATATATAGCATGATACTTTTGGTGTTGAAATTGTTACAGGATCCATTACGTCC CTTGGTTTTAGGTGGAGATCACTCAATAACATATCCAATTGTTAGAGCTATCTCTGAGAAGCTTGGAGGACCAATTGACC TTCTTCATTTTGATGCACATCCTGATCTCTATCATGAATTTGAAGGAAACTTTTATTCCCATGCTTCTTCGTTTGCTCGA ATCATGGAGGGCGGCTATGCTCGTCGACTCTTGCAGGCAAATTTTAATTCTTGTTGATATGTTTATAGCATTTATATCCT AAAAGTTTAATTAAACTGCTAAGGCATTTATTTAACTTACATAAGACCTGGTATTCTCTATGATAGTATGCTACATAGTT CCATTCCGTTCGGCATTTATATTCTGTAATCAGTTTATGACAGGTTGTGTAGCAGCACTCTGGCTGATAATTTGGGTAGA ACAGAATTGTGCTTCATTTAAATGATAAATACACTTTTGAGAATGCAAGTGTGAATATATAGTCCCAATGATGGTTAAGA ATGAGTAAGGTGAAAAAAAAATATGCGAGAAAAGACCCACATACCTCTTCTTAATATTTTGGGTGGAGATGTAGTGTATG GTCTTGTTTCCTCAGTCTACTGTTGTTTGGGCTCCTCCTGTGTCTTGTTTCAATAGTCCTCCTGCCAATGTAGTGGTAAG ATGGTGTGTCTAGTTAAGCAGATAACTAAGTTGAAACTATAGTACAAGTACAAGTGTGTGTATACCTTTTACTGAGGGGT TCCATATTGATTACGTGTAAGATGAAGGCAATATAAGAGAAGAGACCAGCATACCTCATGTCTTAAGATTTTGGGTGAAG ATGTTATTTAGGCAGTGTCTCATTGACATGTAGAGTTGAAAAGGCGGCAGAGGTGATGTTGCTTATCCTTCTACATATCT AATTTCATAAACGAAGGATATTAATGCCCATATAATCTATCATAATGACTTTGTAGTTTCTGCAAGCTGACTTTATTAGG TAAATGGAAAACAAGACACAGACAGTTTCTCTAGCTTTATTTCTTTGAATTTTTCTTCCATCAGACAAATTGTATCATAA GTTTGTTTCGACAGCTAAATTTATGCAACTTCTTTACTTAATATCAAGTTGTTCCTCAGTGATGGTAGTAAAAATTTCAA TTTCGATAGGAGACTTACACATGATATATCACATATATATTTTTCATGCTCTTTAATTAAGTTTTATTCCAGGTTGGTAT AAGATCAATAAATTATGAAGGGCGTGAACAAGCAAAAAAATTTGGAGTAGAGCAATATGAAATGAGAACATATTCAAAGG ATCGCCCCTTTTTGGAGAACCTGGTCTGTCTGTCTCTCTGTCTCTCTCTCCCTCCCTCCTTTGTGTGTATGAGCTAGTGT TTGTGTCTTTCTATCACTTTATATATTATCCTTGGCCTACACTTTCTATATAATTATGCTAACTTTTAAGCCTTGGAAAT TTCCTTTTGCAGAAACTAGGAGAAGGTGTTAAAGGCGTTTACATCTCAATAGATGTGGATTGTCTTGATCCAGGGTATGC ACCAGGAGTGTCTCACCATGAATCAGGAGGTCTTTCTTTCCGAGATGTTATGAACGTCCTGCAAAATCTTCAAGGCGATA TTGTTGGTGGGGATGTGGTAGAGTACAACCCACAACGTGATACTGCTGATGATATGACCGCTATGGTAGCTGCTAAGTTT GTAAGAGAACTTGCTGCAAAGATGTCAAAATGATGATGAATGTCTAGCTTTTTCAGAGTGACATTTAGTTTTCTCTAAGT TTTATTTGAAGTATCAATAAAGGAGTGAGTATAGGTGTACCGTACGTGTACGAGTGAGTTCTTTAGCCTGAATGAAAACA AGCTTGCGCATCTTCTTTTAATGCATGTACGCCAGAAACCATAAGATCAGAACTTGTAATTCTGGTGATTGGTTTCACTT GTGCCGTTGTGCGCCCATCATTTGCCATGTAACTTGAATTTCTGAACAAGAACTCAAGCCTTAGAGTGTCTTTAGTTGTT CTCAAACTCTTTTTGCCTTGACAGCCCCCTTAGCTACCTTTCCACTAACTCGAATTGATAGGCTTCGAAATGATACTTCA TACACATGACTCCAGTTACTCCTTTTGAATTGAAATTTATATTTTCAAACTCAAACCATAGCTCTTTGAAGCCTAACTCA AGAGCTCCAAGCCTTCATAGTCTTTTAATCTTCAATCAGCAGCCTCTAAGACTGAGTTAAAAATATCAATTTTGTAAATA AACTTTCCTTCGAGTCGTACGTGATATACGGCAACATCCTGAGTCACTACTAGAAAAAAGACTTTTCACATCAGGGTTTT CACATCGGTTAATCAATTACCTGATGTAAAAGATGACGCGGTGGCAATATTGAAATTATAGTGAACTTTTATGATAGTTT TCACATCGGTTGGGAATATGTCTGATGTGAAAAGTAGTTAGGAAATACTTTTTACAACGATTTTTATAATAAGCGATGTG AAAGCTAAATGCGGTGGCATTTTTGAAATTTTAATGAAGTACATTTCACATCGGTTAGATTATAGCCGTTGTGAAAAGTG CATCTTTTCTTCTTTTTTCACATCGGTTCGTATATAACAGTTGGGAAAACGTACTCTTTTCTACATTTCACATCGGTTTT GATAAAACCGTTGGGA
CDS sequence (LotjaGi3g1v0436000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCCTAAAGGAATGTCAACTATAGCCCGCAGAGGCATCCATTACATGCAGGAAATACAGGCAGCAAAAGTATCTCC TGCTTCCCTAGAGCAAGGCCAAAAGGGTGTGATAGAAGCTTCCCTAGCACTTATTCGAGAAAATGCAAAGCTCAAGGGAG AACTTGTGCGTGCTTATGGAGGCGCCGTAGCAACTTCATCTCTTTTGGGAGTTCCTTTGGGACACAATTCTTCATTCCTT CAAGGGCCTGCATTTGCACCTCCTCACATTAGGGAAGCTATTTGGTGTGGCAGCACAAACTCAACAACTGAAGAAGGAAA GGATTTAAGGGATCCACGAGTGCTAGCTAGTGTTGGAGATCTTGCTGTCCAAGAAATTAGAGAGTGTGGAGTAGATGATC ATCGATTGATGAATGTAGTTAGTGATGCTGTCAAGTTAGTCATGGAAGAGGATCCATTACGTCCCTTGGTTTTAGGTGGA GATCACTCAATAACATATCCAATTGTTAGAGCTATCTCTGAGAAGCTTGGAGGACCAATTGACCTTCTTCATTTTGATGC ACATCCTGATCTCTATCATGAATTTGAAGGAAACTTTTATTCCCATGCTTCTTCGTTTGCTCGAATCATGGAGGGCGGCT ATGCTCGTCGACTCTTGCAGGCAAATTTTAATTCTTGTTGA
Protein sequence (LotjaGi3g1v0436000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFPKGMSTIARRGIHYMQEIQAAKVSPASLEQGQKGVIEASLALIRENAKLKGELVRAYGGAVATSSLLGVPLGHNSSFL QGPAFAPPHIREAIWCGSTNSTTEEGKDLRDPRVLASVGDLAVQEIRECGVDDHRLMNVVSDAVKLVMEEDPLRPLVLGG DHSITYPIVRAISEKLGGPIDLLHFDAHPDLYHEFEGNFYSHASSFARIMEGGYARRLLQANFNSC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 225 | 220 | 5.2E-114 | – | |
| PANTHER | 6 | 225 | 220 | 5.2E-114 | – | |
| Gene3D | 34 | 225 | 192 | 5.7E-32 | – | |
| ProSiteProfiles | 57 | 226 | 170 | 26.542 | ||
| Pfam | 67 | 215 | 149 | 2.7E-28 | ||
| SUPERFAMILY | 67 | 220 | 154 | 5.22E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi3g1v0436000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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