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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0436500 |
| Transcript ID | LotjaGi3g1v0436500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosylmethionine-dependent methyltransferase, putative; TAIR: AT3G05100.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|P9WLW8|Y1498_MYCTO Uncharacterized protein MT1546; TrEMBL-Plants: tr|A0A1J7J1J2|A0A1J7J1J2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0436500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:84783663..84787540) extracted from Lotus japonicus Gifu genome v1.2.
GATTTCACTCTCATTCCACCTGCAGAGGGAGAGACAACTGAGAGATATTCCATAATTCCATTACACAAATTAAAACCATT ATTTTTATGTTAAAAAATCCATTAATTTTACCATTTTCAGTAAAAAAAAAAGATTTAAAAAATGAGGAATGAAGCTTAAA ATCGTATGAGAATCAAAATAAACCAAACATCCCCTTCATCATTCCAAATCCAATCACTGATTGCTTCTCTCACTGTCGTT GTTGGCGATACCCCTCCCTAGATCTGCTCTCAAAAGGGTACGAATTTCCACTCTTGCTTTTTCTGTATTTCTGTGATTCA TGGGAATGCTTTTATTGGCTTTTGCATGTTTAGAGTGTTTCTGTTCCACACCCATTTCGTGATTTTTGTGAATTGGATTT CGATTGGCCCATGTGGGTTTTGGGGTTTCTGATTTTTGTGTTTTTGTCCATTGTGTTAATTACTTCACTTCAGTTACTCG CTCCTAGCTTCTATTATCCATCTGGGTCACTTAATACTCAAAAATGTTGTTTAAATATGTCACTGAATGCTTCTCTTATT GTTGTTTGCATTATATGGTACTGTTTAGAAAAGAAAAATTGGGATTTTTGTAGCATTGTGGTTCAGTGAGTAATGAGGTG GTTATTAAGTGTGTGTGTGTGTTTGGATTAAAGTTTACGAAAATGAGATTATGTCAACTTGAGTATAGAAAACTGAGTTT GGTTATAAGTGGTTTATTTTTAATGTGATTTATGTTTGGATACTTTTTATTCTAAAGTTGTTTTACAAAATGAATCTTGT TTGGATGATTTAAGTTAATAGCACTTTTAAGTGAGTAAATGCTAAAAATTGACAACTTTCAATGGATAAGCTGAACATAG GTTGGTTGGACTTAACTTGGTTTAAGGCCAATGTTCGATTCCTCTGAATGTGAAAATTAAACTCCGAAACATGTTGACAC AATGTTAAATGTGACTATATGGAAGTTAACTGATGAAAATAGCCAATGACCCAAGCACAGTTTGAAGCTATATGAGTAAT AGCATGTTTGCTTAGTTTTCATTTTCCTGCTACTGCTGTCTTGACAGGCTGGAACTAAGAGCTGGAAGTCATAGATGGCA CTTTCAGTTTCTCGAGCTATGTCAAAGGGTGTAGTGCTGACAGTGCCTGTCCTGGTTCTCATTGCTTCAGTGGCTGCTGT TTTCCTCTTCTTTCTCTTGTCCTCTCTCTCGTCTTGCTCCTGCCCTCCATCTTCAGACACCCCTGTCTCCAATGCTAGGA GTGTTGATATTGGTGTGCCTGAGTCTAGCAGGGGTAATGTTCCTTTATTGACAAGGAAGGAGGATGTTGAATGGGTGAAA GGTCAAATCCAAGCAAATGGGCTTCATATGCAGGACAATGTGCTCCGCAAGGGTATTAACCCTCGCACCAGGGCTCAGCA ACTTGAGGATCTTAGACAGTAAGACTCTTACTCTCAATTTGTTTTACCACTTGTGTGTGTCTGTGTACATGAATATATCT TTGTTTTGAGATACCACGCTGTGATATCATTCATGTCATTAAAGTTTTTAGAATGTCAATTTCTGAAAATCTAGCTATTT CTAGCTTGCAGTGAAAGTTGCTATTTGGTAGAGAGAACATTGAGGGAGGTGGGAGGATAAGTTCTAACAATTTGGACTCC ACATATTAATCACAATATAGGAAAATAAGTTAACTAGCTAACTAGTAGTGTAGCACTGAAAATATGTATGAGTCAGCAAA AGTCAGGCGAGATGCTTGGGAATGATTGGAAATAGGAGTTCCGGGAAATTTTACCTTTTTTCTCTTTTGAGAGATAATGA TGCTATATACTTCAAACTGAAGCTTGTTTACTGTGTGTCCAGCTTTTTGTGAAAATGTGTTTTAGACATTGTATTCACAT CCTTTAAAATTGGTATGTTGCTCAGTTTTTAATTTGCAATTTACAGTTCTATTAGAGGTTCCTTATTTTTTATCCTTGCA TACTGATTTGATTGGTTGCTAATAAGCACAGGGGTTTAAGGTTTTCAAAGTTTCCATCAATCCCAACATAGATAACAGTT CAAACAGTTTTTATTTTTAGCTTGGAGCACATTTTATTATAGTGAATTAGGCTAGCTAATGAACTGCAGAATGGTATGTT CTTGCATTATGATGTCTTTTCAACTCGTGAACTCTTATTCCTTGTCCCTGCTCTCTTTCTCTCCATAAGATTTCAAATAA AGGAACCCATTGTCTTGGTGGGCACTTGGGCAATATATACACTTTCGAAGCAATGATTGCAATTTCTAATTTCATTCTGT TTGATCATGAATTTGTGACTTCCTTTTAGATTTCCTGGTTACAATTTCTTCTTTCAAGTGCAGGTTTAAGGGCATATCCC ACTATGAGGGACCTGAATCAGATAATCACACAGCCTTGCCATGCCCTGGGGAGCTTCTAGTCGAACAGCACCATAGCAAC TACGGTGAACCTTGGGCAGGTGGAAGAGATGTGTTTGAGTTTCTTGCTCAAGCCGTTCAACTCAGACCTGACTCGCTGGT ACTGGAGATAGGCTGTGGCACACTTAGAGTTGGTTTGCATTTTATTCGGTATTTAAACTCTGAACACTTTAATTGTCTTG AAAGGGATGAGCTCTCTCTGATGGCTGTATTTAGGTATGAGCTTCCTGCCCAAGGCCTCTTATACAAAAGACCTTTGATA GTTAAGGGGGATGACATGGATTTCACTAAATTTGGTTCTGACAAAATGTATGATTTGATTTATGCTAGTGCTGTATTTCT TCATATGCCTGATAAACTCGTATGGGCTGGACTGGAAAGATTAGCATCTAAATTGAAGCCTTACGATGGACGAATCTTTG TATCTCATAATATAAAGTTCTGTTCACGGTTGGGAGGAGAGGAATGTACAAAGAGGCTTATGAGTTTGGGGCTTGAGTAT CTTGGGAAGCATACACATGATAGTCTGCTATTCAATCACTATGAGATATGGTTTGAATTTAGACGGTCAAAGGTTTAAGG TCATGATTGAATCTAGAAAAAAAAACGTCAGGAATATGTCTAAATTGCCTGAAGCAACTAAATGTGTTTGCTCATCGTAA CAAATCTTCAGCAACTCAATGATATTGTTGCTTTGAGTCCATGGAGGTCACAGTTTTTTTCTCCTCAGTGGTTCATCAAC TTGTGAGTGGTTTCTCTACTCAGTGGTTCCTCAACTTGTGCCAGAAATCATAATACACTTTTGAGGACTCAACAAAGGCA AGGAGACTTGTATTGTTATTTTTAGGATCCTATTCTTAAAGGGTAGCTCAATATTTTCGTTTTAATGTTGTCTCTATAGA TTCTGATATGATAGTTGTATTTACTATTTAGCATTCATGTTATCTAGCAACTGATTGCTATTTTGACAATTATTACACGG CATGACATCTAACATTTGTGTGTGATTTTAATTTATATTCTTTGGATTTTATGTGTTGTAACTTGTAACAAAGTTGTGTT GGTCATGAATTTTGAAGCAAACAAATGTAAAGAAAGGCTTGGTTGTAGAAGCTGGATAGGGGACTGATCAATATCTAGGT TGAAGTGGCCATAAATGGAAAAGAAAGAAGCGTTGTTTATTTTTGTCAAGTAACCAGGTACCTCTATTAGAGTTGATCCA TCAAGGCATATATATAGCATGGTGGAGTATTTTGTGTGTATATGATCATTCCATTTGATATTTTTTGAGGTTCAAACATT GACAATAGGTATGTTTCATACACTGATTAGAATGGTTTTTTTGCTGGATAGAAATGGAATCAACGAGTTGGGCAGTTTTA CCCTGTTTGTTGATACCCCTTGGAGAAATCTCAAGGGT
CDS sequence (LotjaGi3g1v0436500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACTTTCAGTTTCTCGAGCTATGTCAAAGGGTGTAGTGCTGACAGTGCCTGTCCTGGTTCTCATTGCTTCAGTGGC TGCTGTTTTCCTCTTCTTTCTCTTGTCCTCTCTCTCGTCTTGCTCCTGCCCTCCATCTTCAGACACCCCTGTCTCCAATG CTAGGAGTGTTGATATTGGTGTGCCTGAGTCTAGCAGGGGTAATGTTCCTTTATTGACAAGGAAGGAGGATGTTGAATGG GTGAAAGGTCAAATCCAAGCAAATGGGCTTCATATGCAGGACAATGTGCTCCGCAAGGGTATTAACCCTCGCACCAGGGC TCAGCAACTTGAGGATCTTAGACAGTTTAAGGGCATATCCCACTATGAGGGACCTGAATCAGATAATCACACAGCCTTGC CATGCCCTGGGGAGCTTCTAGTCGAACAGCACCATAGCAACTACGGTGAACCTTGGGCAGGTGGAAGAGATGTGTTTGAG TTTCTTGCTCAAGCCGTTCAACTCAGACCTGACTCGCTGGTACTGGAGATAGGCTGTGGCACACTTAGAGTTGGTTTGCA TTTTATTCGGTATTTAAACTCTGAACACTTTAATTGTCTTGAAAGGGATGAGCTCTCTCTGATGGCTGTATTTAGGTATG AGCTTCCTGCCCAAGGCCTCTTATACAAAAGACCTTTGATAGTTAAGGGGGATGACATGGATTTCACTAAATTTGGTTCT GACAAAATGTATGATTTGATTTATGCTAGTGCTGTATTTCTTCATATGCCTGATAAACTCGTATGGGCTGGACTGGAAAG ATTAGCATCTAAATTGAAGCCTTACGATGGACGAATCTTTGTATCTCATAATATAAAGTTCTGTTCACGGTTGGGAGGAG AGGAATGTACAAAGAGGCTTATGAGTTTGGGGCTTGAGTATCTTGGGAAGCATACACATGATAGTCTGCTATTCAATCAC TATGAGATATGGTTTGAATTTAGACGGTCAAAGGTTTAA
Protein sequence (LotjaGi3g1v0436500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALSVSRAMSKGVVLTVPVLVLIASVAAVFLFFLLSSLSSCSCPPSSDTPVSNARSVDIGVPESSRGNVPLLTRKEDVEW VKGQIQANGLHMQDNVLRKGINPRTRAQQLEDLRQFKGISHYEGPESDNHTALPCPGELLVEQHHSNYGEPWAGGRDVFE FLAQAVQLRPDSLVLEIGCGTLRVGLHFIRYLNSEHFNCLERDELSLMAVFRYELPAQGLLYKRPLIVKGDDMDFTKFGS DKMYDLIYASAVFLHMPDKLVWAGLERLASKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMSLGLEYLGKHTHDSLLFNH YEIWFEFRRSKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 42 | 42 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 5 | 332 | 328 | 1.2E-179 | – | |
| Phobius | 12 | 35 | 24 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 36 | 332 | 297 | - | – | |
| Gene3D | 142 | 328 | 187 | 2.9E-11 | – | |
| SUPERFAMILY | 146 | 313 | 168 | 9.67E-15 | ||
| CDD | 174 | 282 | 109 | 3.61193E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0436500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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