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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0438800 |
| Transcript ID | LotjaGi3g1v0438800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Equilibrative nucleoside transporter; TAIR: AT4G05120.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M0Y3|ENT3_ARATH Equilibrative nucleotide transporter 3; TrEMBL-Plants: tr|I3SPB5|I3SPB5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0438800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85187479..85192352) extracted from Lotus japonicus Gifu genome v1.2.
GATGCTATTATAATAGGTTACTTATGTCCTATGCTACATTTTGGACCCACATAATAGAATATGAATAAACACCTCATATA AGTGACTTTGCTTTCCTGGTGCTGCCATATAGTTATCTATTACTATATATTTCAACTAGAGGTCATGTACACCGAAGCCT CAACTTGGGTTATCTACCTTCATTGAAAAGTGGAATCCGCCATGGTCAACGGTGAGGCGGGTGAGCTTCCAACACCAACA CGTCTTGAGGTTTGTCATTGGATCTATTACTACTTTAATTAGCTCAGGGAAGCTAAGTGAACTATTTGTTCTTATTTTCC ATTCATTTTATGGAACAGGGAAAATATGCTGCAATAATTGTCTGCTGGCTTCTTGGCAATGGATCTCTTTTCTCATGGAA CAGTATGCTCACAATAGAAGACTACTATGTTTACTTGTTTCCGGTAATTGATGTGTATTTATTTCTCATGGAACAGTATG CTCATAATAGAAGAAATATTATTGAAGTTTTTTGTCAAATTAAAAAGGCTTAATTCCACTTTGGGCCCCTGATCTTTCAA AAATGAGCGATCGGGCCCCCCGTATTTAAATGTAGCGGTCAGCCACCCCAACGTTTCAAAAACGTGCGATCGGGGCCCTT ATGTTAAGTTCCGTTAGTTTGACCAAACGGAGCAGTGACGTGGATTTTCTTTTTTATTTTAAGATTATTTTTTTACCCAA AAATTACCCCTCTCAGTTCTCTCTCTCACACTCGAACCTCTCTCTCCCTCTTTCACGCTTCTTTTTCTTTCTTCTTCTTT CTTCTTCCTCCTTCCTCCTTCTATGGCTTCCTCAACCTCACCCCAACATCACCCCACCCCACAACCCCAAATCTCTCAGA CTCGCTCGCTCTCTCGGTCTCGCTCTCTCCTCTGCATCTCTCTCTCGCTCTCTCTCTCTCGATCTCGCTCTCGCTCTCTC CTATGGATTTGGGCGCAGTGAGGATAGAAAGTGTTGCGGGAGAAGCAGAAGGGGCAGATCCATATCTTGGCGTTGAAGTC GACGATGCAGAAGGGGTTGAGAAGGGAGGAGCATGACTTGCAGCGGAGTGGGGTGTAAGGGACGGTGGGGATGTCGTTAT GGTGATGGTGGTGAGCCGCCTCAACAGCGTTTCAATTTCTTCTTTCTCTCACGCCATGGAATCGAAATCAGGAGGAGAAA GATCTGAACTTCCCTTCCCATCCTTTCCTCCCTTGGACAATGGATCTGCATCTGGGGATTTATGGGTTCTGGTGTTTAGG TTATGTGGAGAAGATTGTTGGACTGGGTTTGTGGATTGGGGTGCAGTGGGGGTTTAGTTGCGAGTGGTTATGGAGCCGAT TGATCTTCGTCGAAGGTAGTGGTGGCGGCGCAGCCATGGATGAAGGGCGGCGGTGGCTAGGTGAGAGAGATGGTGAGTTC TAGGGTTTTCAAGAAGGAGAGAGCTCAAATTTGTCTGCCTAATTGCTAATTGACCAGATTAATTATTTTGATTAGTGAAA CCTTAATTAATTAATTCACTATAGATAAATGAATGAACTACAGGGACCTCTCGATTTTTCTTCTCTTGCTTGCTAAGTTA GGATTGAGGTGAAATTAGGGTAAAATTTGGGGGAATTGGGTTTGTGTATTGAGTGGGAAATTTCTGGGTAAAAATTTTAA TCTTAAAATAAAAAAGAAAATCCACATCACTGCTCTGTTTGGTCAATCTAACGGAACTTAACAGAAGGGCCCCGATCGCA CGTTTTTGAAACGTTAGGGTGGCTGACCGCTACATTTAAATACGAGGGGCCCCGATCGCTCATTTTTGAAAGATCAGGGG CCCAAAGTGGAATTAAGCCAATTAAAAACTTCACAATTTTGCTAACCTCGTCATACTTACTTAGGTCTAATGCAAAAAAT AATACCCATGTATAATGATTAAATTACTTAACCTTCCAAGCTATAATATATCTATACCATATAGTTTTAACTTTTAAAGA CCTTTTTACTCAGTTAAGTGATTTAGATGTTGTAATTTTCTTGGTCAAAGAGATAGTTTAATTTATTTTTCTCTTGTGCA GAAATACCACCCCTCCAGGGTGCTTAGTCTTGTATATCAGCCATTTGCAATTGGAACACTTGCTATACTGGCTTATAATG AGGCAAAAATCAATACACAAAGACGGAACCTATTTGGATACACTCTTTTTTTCATAACCACTTTGTTGGTGTTGATTGTA AGTCCAATTCACTTGTTTGTGAACTTTGATTCCTTTACCATGGTTTTGATTCCATCTTTCCAACCAATCTTCCGTAGTTG AATTTAGCAACATCAGGTAAAGGAGGACTTGAAACATTCATTGTTATATGTGCAATTAGTGGTGCTTTTGGAGTTGCAGA TGCTCATGTTCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCAACCAGAATTCCTTCAGGTCAGCATCAGTTATAAAA TTACTACGAAATTATTGAAGATGGATTCAACATATGAATTTATTTACTATGATAAATTTATTACAGTCTTTCCTTGCTGG CTCAGCAGCATCCGGTGCATTAACCTCTGCTTTGAGGCTAATTACAAAAGCAGCATTTGAGAATTCTAAGGATGGTCTTC GAAAAGGAGCCAGTAGGTTCAACTCTTCTTCTGTTCTTTTTGCCATTGATTATAAGTAAATATAAACTACTGTAGGCTTC CTGCCATAAGTCTGTAACATACTACCATGTGTACATTTTTACGAAATTCGCCATTTGTGTTGTCAACTTGTTGAGAATAC GTTTGCAATTTGATTTTTGAACCTAACATTTCAATTCATGAACATACTTATGCTAATGTGAGTTGTTTTATTTACAACAT AAACAAGATTAGCAACAAATTCCTTTGTTTTGGTAAGACAGTAGTTCCTTTTCTGCTGAGTCCTCCATCATCAATTTTTA AGTGAGATTCTTGCCTTGAGTTCTTTTAGTACCATGTTATCACAATATAATGTGCCTTATAAAATTGAAGCTACTTTTGA GTTTTGATTGGCAATATCAATTTTCTTCTAATTCATTCAAATTTGAGTTTTGATTGCCATTGAACTATATACAATTATGA CAATTCTCTTCACTTCCCACACTATTTAGTTACTGATTATTATCATGCTATACTGTCCTTGCAGTTCTATTCTTTGCCAT ATCAACATTCTTTGAGCTTCTATGTGTTCTTCTCTATGCATCTGTTTTCCCCAAATTACCAATTGTTAAGTACTACCGAT TAAAAGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGATCTTGCAGCTGGTTTAATCCAGACATTACCTGAAGTGAGT ACTGTTTTTGTCTTCTGATTCACTTTCCAGTGTATCTCAAACTTTTGTCACTGTTTAACATTCAGCTTATGCTTTGAGAT TCTTTTTCCAGGGCGAGGAATATGCAAAAGAACAAAAGCGGAAGGGAATCAAGCAATTGTTATTGGAAAACATTGATTAT GCACTTGATATATTCCTAATATATGTCTTAACACTGTCAATTTTCCCTGGATTCCTTTCAGAAGATACAGGATCACATAG TTTAGGGTCCTGGTATGTTCATTACAGAACAGTAGCCCAAGTAATGTGTTTGGTATTATATGTGCCACTGTAACAGTTGA TGTTAATTTCCTATTGTTTCAGGTATGCTCTTGTTTTAATTGCAATGTATAATGTGTGGGATCTGATTGGAAGGTACATT CCACTCTTGAAATGCTTGAAGTTGGAGAACCGAAAGATGATCACGGTAGCAATTCTATGTCGTTTCTTGCTTGTTCCTGC ATTTTATTTCACTGCAAAGTATGGTGACCAGGGGTGGATGATAATGTTGACATCCTTCTTGGGGCTATCCAATGGCCACC TTACTGTCTGTGTTCTCACATCTGCACCCAAAGGTTACAAGGTGAGTCTGTCATGTGTTAAATATAGGCTTCAAACTTCA GTTTTATTGAAATAAAGCTGAGAAATATTTCTTTTTTTGGTTTTTTGCAGGGTCCAGAACAAAATGCCTTGGGAAACCTA TTGGTGCTGTTTCTTTTTGGAGGAATTTTTGCAGGGCTGACCCTTGACTGGCTGTGGTTAATAGGTAAAGGGTGGTGAGT GATGACACATCTCAATCATGCCAAAATAGAGTAATGATTGTGGCTCAACCATATTCGAATTTCGTACAGAAATTGTATAT TATTTTGTCCTCATTTAGCAATGATTTCAATTTCAATTATAACAGTCAAATTATCTGCAAATTTTATCAATGTTGTACTT GTAAAGATACATCATCCAATTCGACATGCTTAATTGTATCTTCAGTGTAGCATAGCTTGTACATATCTACATGCAATTTG AACTTTCTAAATCCAAGCCCAATTGCATATTTTCTATCACATTATTTATCATATCACTCATTTTCTCATTTCTTTCTATC TCATTCTGATGTGAGTGAAATTCAAGTGCGAATCTTGGTGTATGCCTTTTCTTTTGTTGGCTAGTGACTTCCTAGGAAGA AGGGGAAAGATGAGGGACCATATGTGATTAAAATATTTTAGAGAGACTAGAATTGTTGTGAAAATCTATGTGGTCATTCC TTAGCCGACTGCGCTCGTCATATGGATTATTGACTAGTTAAAATTGATGGCACGTTGACAATTGGATCCATTGGAGCCAT AAATACCAAGTTTCGACTCATATGGGCTAGACCCATTGATGCCTAGCTCCATTAGTTAGTCCTTTTGTAATTTTGGATAT CTGTGATCAGTTGTTGAATTTGACACATATTGTGTTGTGAGTTTTAGGAATTTATTAAGTGTACTATCACTTGT
CDS sequence (LotjaGi3g1v0438800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCAACGGTGAGGCGGGTGAGCTTCCAACACCAACACGTCTTGAGGGAAAATATGCTGCAATAATTGTCTGCTGGCT TCTTGGCAATGGATCTCTTTTCTCATGGAACAGTATGCTCACAATAGAAGACTACTATGTTTACTTGTTTCCGAAATACC ACCCCTCCAGGGTGCTTAGTCTTGTATATCAGCCATTTGCAATTGGAACACTTGCTATACTGGCTTATAATGAGGCAAAA ATCAATACACAAAGACGGAACCTATTTGGATACACTCTTTTTTTCATAACCACTTTGTTGGTGTTGATTTTGAATTTAGC AACATCAGGTAAAGGAGGACTTGAAACATTCATTGTTATATGTGCAATTAGTGGTGCTTTTGGAGTTGCAGATGCTCATG TTCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCAACCAGAATTCCTTCAGTCTTTCCTTGCTGGCTCAGCAGCATCC GGTGCATTAACCTCTGCTTTGAGGCTAATTACAAAAGCAGCATTTGAGAATTCTAAGGATGGTCTTCGAAAAGGAGCCAT TCTATTCTTTGCCATATCAACATTCTTTGAGCTTCTATGTGTTCTTCTCTATGCATCTGTTTTCCCCAAATTACCAATTG TTAAGTACTACCGATTAAAAGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGATCTTGCAGCTGGTTTAATCCAGACA TTACCTGAAGGCGAGGAATATGCAAAAGAACAAAAGCGGAAGGGAATCAAGCAATTGTTATTGGAAAACATTGATTATGC ACTTGATATATTCCTAATATATGTCTTAACACTGTCAATTTTCCCTGGATTCCTTTCAGAAGATACAGGATCACATAGTT TAGGGTCCTGGTATGCTCTTGTTTTAATTGCAATGTATAATGTGTGGGATCTGATTGGAAGGTACATTCCACTCTTGAAA TGCTTGAAGTTGGAGAACCGAAAGATGATCACGGTAGCAATTCTATGTCGTTTCTTGCTTGTTCCTGCATTTTATTTCAC TGCAAAGTATGGTGACCAGGGGTGGATGATAATGTTGACATCCTTCTTGGGGCTATCCAATGGCCACCTTACTGTCTGTG TTCTCACATCTGCACCCAAAGGTTACAAGGGTCCAGAACAAAATGCCTTGGGAAACCTATTGGTGCTGTTTCTTTTTGGA GGAATTTTTGCAGGGCTGACCCTTGACTGGCTGTGGTTAATAGGTAAAGGGTGGTGA
Protein sequence (LotjaGi3g1v0438800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNGEAGELPTPTRLEGKYAAIIVCWLLGNGSLFSWNSMLTIEDYYVYLFPKYHPSRVLSLVYQPFAIGTLAILAYNEAK INTQRRNLFGYTLFFITTLLVLILNLATSGKGGLETFIVICAISGAFGVADAHVQGGMVGDLSYMQPEFLQSFLAGSAAS GALTSALRLITKAAFENSKDGLRKGAILFFAISTFFELLCVLLYASVFPKLPIVKYYRLKAASEGSKTVSADLAAGLIQT LPEGEEYAKEQKRKGIKQLLLENIDYALDIFLIYVLTLSIFPGFLSEDTGSHSLGSWYALVLIAMYNVWDLIGRYIPLLK CLKLENRKMITVAILCRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGHLTVCVLTSAPKGYKGPEQNALGNLLVLFLFG GIFAGLTLDWLWLIGKGW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | - | – | |
| PANTHER | 12 | 416 | 405 | 3.9E-227 | ||
| PIRSF | 12 | 416 | 405 | 1.0E-82 | ||
| PANTHER | 12 | 416 | 405 | 3.9E-227 | ||
| Phobius | 19 | 38 | 20 | - | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 39 | 57 | 19 | - | – | |
| TMHMM | 57 | 76 | 20 | - | – | |
| Phobius | 58 | 76 | 19 | - | – | |
| Phobius | 77 | 87 | 11 | - | – | |
| TMHMM | 88 | 110 | 23 | - | – | |
| Phobius | 88 | 107 | 20 | - | – | |
| Phobius | 108 | 112 | 5 | - | – | |
| Phobius | 113 | 132 | 20 | - | – | |
| TMHMM | 114 | 136 | 23 | - | – | |
| PRINTS | 127 | 149 | 23 | 2.5E-5 | ||
| Pfam | 128 | 412 | 285 | 1.4E-35 | ||
| Phobius | 133 | 152 | 20 | - | – | |
| TMHMM | 149 | 171 | 23 | - | – | |
| Phobius | 153 | 175 | 23 | - | – | |
| PRINTS | 155 | 175 | 21 | 2.5E-5 | ||
| Phobius | 176 | 186 | 11 | - | – | |
| TMHMM | 186 | 208 | 23 | - | – | |
| Phobius | 187 | 208 | 22 | - | – | |
| Phobius | 209 | 265 | 57 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 266 | 285 | 20 | - | – | |
| PRINTS | 274 | 291 | 18 | 2.5E-5 | ||
| Phobius | 286 | 296 | 11 | - | – | |
| TMHMM | 296 | 318 | 23 | - | – | |
| Phobius | 297 | 317 | 21 | - | – | |
| Phobius | 318 | 328 | 11 | - | – | |
| Phobius | 329 | 348 | 20 | - | – | |
| PRINTS | 330 | 347 | 18 | 2.5E-5 | ||
| TMHMM | 330 | 347 | 18 | - | – | |
| Phobius | 349 | 353 | 5 | - | – | |
| Phobius | 354 | 378 | 25 | - | – | |
| TMHMM | 357 | 379 | 23 | - | – | |
| Phobius | 379 | 389 | 11 | - | – | |
| Phobius | 390 | 413 | 24 | - | – | |
| TMHMM | 392 | 414 | 23 | - | – | |
| Phobius | 414 | 418 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleoside transmembrane transporter activity | Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Nucleoside transmembrane transport | The directed movement of nucleoside across a membrane. |
Expression pattern of LotjaGi3g1v0438800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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