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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0440500 |
| Transcript ID | LotjaGi3g1v0440500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hexosyltransferase; TAIR: AT2G20810.1 galacturonosyltransferase 10; Swiss-Prot: sp|Q9SKT6|GAUTA_ARATH Probable galacturonosyltransferase 10; TrEMBL-Plants: tr|G7IKA2|G7IKA2_MEDTR Hexosyltransferase; Found in the gene: LotjaGi3g1v0440500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85344328..85345803) extracted from Lotus japonicus Gifu genome v1.2.
AACTTCTTATGTCCTGTTGTGCAGAGAAATTACAAGCATGATAGGATCATGGAAGGCCTTAATATTACTGACGAGATGTT AAGTTCGAACTCAGTTACCAGACAACTTAGTGATCAGATATCCCTAGCAAAAGCTTTTGTTGTCATTGCGAAAGAAAGTA ACAATCTCCAATTTGCTTGGGAACTAAGTGCCCAAATCCGCAATTCACAGATTCTCCTTTCAAATGCCGCCACTAGGCGT GCTCCTTTAACAACCAGGGAATCAGAAAGCGCTATCCATGATATGGCATTATTGTTATACCAGGCCCAGCAGCTCCATTA TGACAGTGCAACCATGATCATGAGATTCAAAGCAAAAATTCAAACTCTTGAAGAACAGATGAATTCTGTAAATGAAAAGA GTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAAAGCCTATACTGTCTTGGTGTCCGGTTGACAACAGAGCGG TTCAAAAACCTTAATTTGCAAAAGAAATTGAAGGACAGAAGGCACGCTGAGATGAAGCTTAAGGATAACAATCTTTACCA CTTTTGTGTGTTCTCCGATAACATTCTTGCAACATCAGTTGTGGTCAATTCAACTGCAATCAATTCTAAAAATCCAAATA TGATTGTTTTCCACCTTGTCACTGATGAAATAAATTATGCTGCGATGAAGGCATGGTTTACCATTAATGATTTTGGTGGG GTGACTGTGGAAGTTCAGAAGTTTGAAGACTTCAGTTGGTTAAATGCTTCATATGTTCCTGTGCTTAAGCAACTTCAAGA CTCAGAAATTCAGAGCTACTATTTTTCTGGCAACAGTGATGATGGCAAGACACCTATCAAATTCCGTAACCCGAAATACC TTTCCATGCTTAACCACCTGAGGTTCTATATCCCTGAAGTTTTTCCTGCACTGAAGAAGGTGGTGTTCCTGGATGATGAT GTCGTGGTTCAAAAGGATCTTTCTGGTCTTTTTTCCATTGATTTGAACGGGAATGTCAACGGAGCTGTTGAGACATGCAT GGAGACATTTCATAGATACCATAAGTACTTGAACTATTCTCATCCACTTATACGTGCACATTTTGATCCTGATGCTTGTG GATGGGCATTTGGGATGAATGTATTTGATTTGGTTCAATGGAGGAAAAAGAATGTAACTGGCATCTACCACTACTGGCAG GAAAAGAATGTAGACCGGACTTTGTGGAAACTCGGTACCTTGCCACCTGGACTGTTGACATTTTATGGACTAACTGAGCC TTTGGACCCATCATGGCATGTATTAGGTTTTGGCTACACAAATGTTGATCCTCAGTTGATAGAGAGAGGTGCTGTACTGC ACTTCAATGGGAACTCCAAACCATGGTTGAAGATTGGGATTGAAAAATACAAGCCCTTGTGGGAAAAATTTGTTGACTAC TCCCATCCTTTATTGCAACAATGCAACTTCCATTGA
CDS sequence (LotjaGi3g1v0440500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGGCCTTAATATTACTGACGAGATGTTAAGTTCGAACTCAGTTACCAGACAACTTAGTGATCAGATATCCCTAGC AAAAGCTTTTGTTGTCATTGCGAAAGAAAGTAACAATCTCCAATTTGCTTGGGAACTAAGTGCCCAAATCCGCAATTCAC AGATTCTCCTTTCAAATGCCGCCACTAGGCGTGCTCCTTTAACAACCAGGGAATCAGAAAGCGCTATCCATGATATGGCA TTATTGTTATACCAGGCCCAGCAGCTCCATTATGACAGTGCAACCATGATCATGAGATTCAAAGCAAAAATTCAAACTCT TGAAGAACAGATGAATTCTGTAAATGAAAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAAAGCCTAT ACTGTCTTGGTGTCCGGTTGACAACAGAGCGGTTCAAAAACCTTAATTTGCAAAAGAAATTGAAGGACAGAAGGCACGCT GAGATGAAGCTTAAGGATAACAATCTTTACCACTTTTGTGTGTTCTCCGATAACATTCTTGCAACATCAGTTGTGGTCAA TTCAACTGCAATCAATTCTAAAAATCCAAATATGATTGTTTTCCACCTTGTCACTGATGAAATAAATTATGCTGCGATGA AGGCATGGTTTACCATTAATGATTTTGGTGGGGTGACTGTGGAAGTTCAGAAGTTTGAAGACTTCAGTTGGTTAAATGCT TCATATGTTCCTGTGCTTAAGCAACTTCAAGACTCAGAAATTCAGAGCTACTATTTTTCTGGCAACAGTGATGATGGCAA GACACCTATCAAATTCCGTAACCCGAAATACCTTTCCATGCTTAACCACCTGAGGTTCTATATCCCTGAAGTTTTTCCTG CACTGAAGAAGGTGGTGTTCCTGGATGATGATGTCGTGGTTCAAAAGGATCTTTCTGGTCTTTTTTCCATTGATTTGAAC GGGAATGTCAACGGAGCTGTTGAGACATGCATGGAGACATTTCATAGATACCATAAGTACTTGAACTATTCTCATCCACT TATACGTGCACATTTTGATCCTGATGCTTGTGGATGGGCATTTGGGATGAATGTATTTGATTTGGTTCAATGGAGGAAAA AGAATGTAACTGGCATCTACCACTACTGGCAGGAAAAGAATGTAGACCGGACTTTGTGGAAACTCGGTACCTTGCCACCT GGACTGTTGACATTTTATGGACTAACTGAGCCTTTGGACCCATCATGGCATGTATTAGGTTTTGGCTACACAAATGTTGA TCCTCAGTTGATAGAGAGAGGTGCTGTACTGCACTTCAATGGGAACTCCAAACCATGGTTGAAGATTGGGATTGAAAAAT ACAAGCCCTTGTGGGAAAAATTTGTTGACTACTCCCATCCTTTATTGCAACAATGCAACTTCCATTGA
Protein sequence (LotjaGi3g1v0440500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEGLNITDEMLSSNSVTRQLSDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAATRRAPLTTRESESAIHDMA LLLYQAQQLHYDSATMIMRFKAKIQTLEEQMNSVNEKSSKYGQIAAEEVPKSLYCLGVRLTTERFKNLNLQKKLKDRRHA EMKLKDNNLYHFCVFSDNILATSVVVNSTAINSKNPNMIVFHLVTDEINYAAMKAWFTINDFGGVTVEVQKFEDFSWLNA SYVPVLKQLQDSEIQSYYFSGNSDDGKTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSGLFSIDLN GNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVQWRKKNVTGIYHYWQEKNVDRTLWKLGTLPP GLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKFVDYSHPLLQQCNFH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 474 | 474 | 4.6E-299 | – | |
| PANTHER | 1 | 474 | 474 | 4.6E-299 | ||
| Coils | 97 | 117 | 21 | - | – | |
| CDD | 170 | 463 | 294 | 3.76761E-106 | – | |
| SUPERFAMILY | 170 | 473 | 304 | 2.08E-67 | ||
| Gene3D | 171 | 467 | 297 | 3.4E-27 | ||
| Pfam | 177 | 449 | 273 | 2.2E-78 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring glycosyl groups | Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor). | ||
| Molecular function | Polygalacturonate 4-alpha-galacturonosyltransferase activity | Catalysis of the reaction: UDP-D-galacturonate + 1,4-alpha-D-galacturonosyl(n) = 1,4-alpha-D-galacturonosyl(n+1) + UDP. |
Expression pattern of LotjaGi3g1v0440500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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