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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0442000 |
| Transcript ID | LotjaGi3g1v0442000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Indole-3-acetic acid-amido synthetase GH3.3; TAIR: AT4G03400.1 Auxin-responsive GH3 family protein; Swiss-Prot: sp|Q9SKE2|JAR1_ARATH Jasmonic acid-amido synthetase JAR1; TrEMBL-Plants: tr|I1LUE4|I1LUE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0442000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85466682..85471654) extracted from Lotus japonicus Gifu genome v1.2.
GTACTACAAAATCTTCCTTCTCCACAACCAAAATTATTTTATCGCAGCACTTCCAACATTCCCCCATCACTGCATTATCC ACTTCAATGGAACCAGATACAAGTTATCACAGCAATGTCAATTGCAGTGGTGACTGTGATATCATTACCTGGTTTGAAGA TGTGTCCATGAACGCCAGTTCCGTTCAGACTCAGATACTATGCAGTATTCTGAAGCAGAACTATGGGGTGGAATATCTGA AGAAATGGTTGGGGAACTACAATATCTCAGAGATGGATGCAAGTGCATTGGAATCCCTTTTCACTAGTGTGGTTCCCCTT GCCTCACTTGTGGATTTTGAGCCATATATCCAAAAAATTGCAGATGGAGAAACAGGTCCTATACTCACTCAACAACCCAT GACCACTCTTTCCTTAAGGTACTATACTTTACCTTATTTCATGATTTTATTACTTTTAGTTCTTCCTTCCTCCTCTTTTG TGCATAAAAGGCATTCCTTGCAGCTTCAATTTTTCTTTCATTTTATGGCTATGTTCCCATTGATATTAATCAGGAATCAG GATATAGAATATTATATTGAGTCCATATATAGCTTTCTCCTTTTTATTCCGATAGAAAAAATGTGTGGTGATGATGGTTG TGTGCAGTTCTGGAACCACAGAGGGAAGGCAAAAGTTTGTGCCCTTTACAAGCCATAGTGCACAAACTACCCTTCAAACT TTCACTTTAGCAGCAGCCTATAGATCAAGGTGTGCCTCTCAACTCTCATTCTATTATTGGTACTCCTTAATTTCTGTGAT GAATCTTAATGATAACTTAGCTTTTGGATATACATCATTTCTACCACAAAACACATAGATCAACTAACATGATGTTGTTC TAGTTTAAGCAGATGTTTTGGTTTCGAGTTCCTATGAATACAACTGAGTTAAATACACGATATTGTTCTATAGCTTAGGC ATATGTCTTGGGTATGAGTTCATGTGAATGCAGCTAGTTAAATATTTGATTTCTTTTTTGAAGTTGTTTCATTCTTCTTC TCACTGTTTAACTTACAGGGTTTATCCCACAAGGGAAGGAGGTAGGATTCTTGAATTCATATACAGCAGCAACCAGTTCA AAACAAAAGGAGGCTTATCAGTAGGAACAGCCACAACACACTACTATGCAAGTCAAGAATTCAAAATCAAACAAGAAAAA ACAAAGTCATTCACTTGCAGTCCTTATGAGATCATTTCAGCAGGGGACTATAAACAATCCACATACTGCCACCTCCTTCT TGGCCTCTTCTTCTCTGATCAAGTGGAGTTTATTTCTTCAGCTTTCGTCTACGGCATTGTGCAAGCCTTTCGCAGTTTCG AAGAGCATTGGAGGGAATTGTGCAGTGACATTAGACATGGTACTCTAAGTCCACGAATCAAACTACCACAAATGAGAGAT TCTGTTTTGGGAATCATCACTTTATCAAATCCCTCATTGGCTTCAAAACTAGAAGCCTCTTGCCAGGAGCTAGAACTGGT AAATTGGTTTGGTTTGGTTCCGAAGCTTTGGCCAAATGCTAAGTACATATATTCCATAATGACAGGTTCTATGCAACCAT ACTTGAAGAAGCTTAGGCATTATGCAAATGGGTTGCCATTAGTAAGTGCTGATTATGGCTCAACTGAGAGCTGGATAGGA GTTAATGTGGATCCTGGTTTGGCTCCAGAGAGTGTTACATTTGCTGTTGTGCCCACTTTCTCTTACTTTGAGTTCATACC ACTTTACAGACAGAAACAAGATCATTCAAGTGCTTCAGTTGGGGATGATTTCATGGAAGACAGACCAATCCCACTATCCA AGGTTAAGGTTGGACAAGAGTATGAAATAGTGCTCACAACTTTCACTGGTAAACACTCATTCTTCTTCTCTTCAATAGAT GCTCATTTACATCTAACACTTATTTCTCCTGTACTATGATTTTCGCTAATGTTTCATGATTTGCGAGGAAACCTCACACC TACAGTTTATGACATTTTTTACTCTAATAAACTCTACAATTTTTTGCGGTAAAAAACGACACAAACTATTGGTTTTTTTT TATAGGTAAATGTTAGTTGTTACAAATGTTAGTAAATTAGTCCCTCCTCCGGATTCAAATCCGGGACTCTTCACCCTCAC CCCACCCAACCCTTATAACACAAACTATTGGTGTTAATGCCGTACACGACTCACCTCTCTATAATTTTTATTTAGACACT TCTCACATTCAAATTCAACTTTAATACATTCGCATTCAATTTTTCTTCAATCCCAATTTCACCTCATTTGTTCGCAATTC GCATAGATGTCGTTTTCCCTTTTTAAAATTAGCATTCTTTGTTTTATTAAAATTAATTTTTTTTTGTTGAGGTGTTTTTG TTCTTATTAGAAGCACGAAGAAAGAATTAACAAGGTAATATAATATAATTTGAATCCTCTTTAATTATACATGGTAGCAC ATCACAGAGACAGTTGGTTTTATACTATACTGAGACATTAGATGCATGAATGAAATACATTCTGCCAATGGGGGGGCCTT TATTTTCTTCGGATATTCTTATCAGTGTTGGCCACAATTTGGCATTGTGTGACCATAACCCACGGGTTGGTTCATACACA TGTCGTATTGTAGCTGTCCTTTGTTATTTCAGAACTAATGTTATGTACATTTCATGACAAGGATTCACCATGACTTTTGA TAGTGTGGTCATTTTCAAAATTCCATTTTCCAAAATGTAATTCTTTGGGTTATATAGTGCATTTGTTAGATTATACATAC TAATGTTTTCCATAACCACATTGATTTAAATCGGTTGAGGGCATCAGTTCAAAATTTAATAGTCGGATTGTAGGTAAACC AATAGTAGTTAAATAATATTTTTTAAATATACATATGAAATTATATATAATAAAATATTACACACAATATATAGTTTTTT AACTTTCAATTGAGATGAAAATTAGAATTTTAACCTTCAATATATAGATTTATATAACATTCAATTTAAGGAATATGGTG CATCATGGATTCATGGTAAAATGATCATTCATGCATGAAATTATACATAGTCCAAAAAAAAGTGTAAAATGGCCACAACT GATTCAGACTAATTTTTTAATGGTTTTAATTTTTGACTGGTTTACCGGCTTCAGCAAGATCAGTTTTCGTGTGCTGGTTG AACATATAAAACACTTCATCTTTCATCTTCTTAATTTGTTATTGTTAATATGTATATGAAAAATGATTTATAAACATTTG CAATTTGCATAATAAAAATCTAATAGGCACCCCATAGTGAGAAAGAAACAAAAAGAAATTGATATGATATATAATAATGA AAAGAAATAGAGTAAAAAGATAGATGTTTGTTGCATGTAAACTCTATCTGTATGTCTAAATATATATAAAGTTGTGCTGG TTGAAAATACAAAGTCGCAATATCTGAGATGGCACACATGGCAGTTTTATTTTATCAGAACTTGTGAAAAAGAGTAAAAC ATAATTGTGGCAGTTCTTTCGAACACACAAGTTGTGCCGGTTAAAAACTGCTCCATGACCTCTATGTCCCCCCGGATGTC ATTGTTCTCACAGAGAGTCAGAGAATCATTTTTCTAATACTCTATCCATTCATTTTTAACAGTACATTTTGAAGAAATTT TTTTTTCTATTTAACTGTCCACTTAGCATTTTAAGAGAACATTAAATGATGTTTTTATCACAAATGTCATTGTCAGTACA ATAAATGAGAAAAGATAACACATACTTTAAAAGGTAAAATAGAAAAATAATCCTCACTTTTTCTAAAAATCAACAAAATT AATCACATCCTTAATATGTGTGCCTCCACTCAAAGTGGACAGTTAAATAGGAACGAAGAAAGTATATACAAAGTATCTAA TAAAAATTTGTTTACTTTCAGGACTATACAGGTGCAGATTAGGAGATGTGGTGGAAGTGGCTGGTTTCCACAACGGTACA CCAAAATTGAACTTCATATGCAGAAGAAAACTGATTCTAACAATAAACATAGACAAGAACACAGAGAAGGACCTTCAGAT GGTGGTGGAGAAAGGGTCACATGTGCTGAACCAGGAATCCCAAGCAGAGGTAGTTGATTTCACAAGCTATGCCGACGTGT CGAACCCGCCGGGTTGCTATGTTATTTTCTGGGAGATGAAAGGAGAAACAGAGGAGAAGGTGCTTGAAGCGTGTTGCAGG GAAATGGATGCAGCTTTTGTTGACCATGGCTATGTTGTGTCGAGAAAAACATGTTCAATAGGGCCATTGGAGCTTCGCAT TGTTGAGAGTGGAACTTTCAAGAAGATATTGGATTGTTATGTGGCGAGTGGTGCAGGGTTGGGACAGTTCAAGACACCTA GGTGCACCAACAACCCTGTCCTCCTCAACATTCTTAATGCATGCACCATTAAAACATTCCGGAGTACAGCTTATGGTTCA AACCGACCATGATATAATGCATCATTGCTTTTGTTCCCTTTTTTCTTCCAAATGTATCATGAGGACAGGTTTTGTTCTTG TGAACAAGAGTGAAGTGATTGCCGGAGGCAATGAGCTAGCTAGGACACCTTTTAAATAAGCAATTCCTTCCTTCGGGCTG TTATATGGTTTTCTTAGTTTAGATTTTCTTTAAGGATGTTGGTGGATTAGTTTTGAATTTTTGGAGAAAAAGGTAAACTG ATCTTAAGCTAAATTTAGCTTCAAATTCGTAGTAGGAAAATTAGGACTACTTCCGGGTGATTTTCAGTTTTGAAAAATAA AACTAGTTTTCAATATTAGCTTGGGTTTTCATATTTAAAAAGTTGTTGTCAAATTTGTAAATTCATAAAAGTTACTATCA TTATAAGACATTTACTACTAATATTACCTCAATGCGTGTAGTAATAGAGGTGACGACGGACATGGTAGAGCAAGTTAATA GTGGTGGTAGAGG
CDS sequence (LotjaGi3g1v0442000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACCAGATACAAGTTATCACAGCAATGTCAATTGCAGTGGTGACTGTGATATCATTACCTGGTTTGAAGATGTGTC CATGAACGCCAGTTCCGTTCAGACTCAGATACTATGCAGTATTCTGAAGCAGAACTATGGGGTGGAATATCTGAAGAAAT GGTTGGGGAACTACAATATCTCAGAGATGGATGCAAGTGCATTGGAATCCCTTTTCACTAGTGTGGTTCCCCTTGCCTCA CTTGTGGATTTTGAGCCATATATCCAAAAAATTGCAGATGGAGAAACAGGTCCTATACTCACTCAACAACCCATGACCAC TCTTTCCTTAAGTTCTGGAACCACAGAGGGAAGGCAAAAGTTTGTGCCCTTTACAAGCCATAGTGCACAAACTACCCTTC AAACTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCCACAAGGGAAGGAGGTAGGATTCTTGAATTCATATAC AGCAGCAACCAGTTCAAAACAAAAGGAGGCTTATCAGTAGGAACAGCCACAACACACTACTATGCAAGTCAAGAATTCAA AATCAAACAAGAAAAAACAAAGTCATTCACTTGCAGTCCTTATGAGATCATTTCAGCAGGGGACTATAAACAATCCACAT ACTGCCACCTCCTTCTTGGCCTCTTCTTCTCTGATCAAGTGGAGTTTATTTCTTCAGCTTTCGTCTACGGCATTGTGCAA GCCTTTCGCAGTTTCGAAGAGCATTGGAGGGAATTGTGCAGTGACATTAGACATGGTACTCTAAGTCCACGAATCAAACT ACCACAAATGAGAGATTCTGTTTTGGGAATCATCACTTTATCAAATCCCTCATTGGCTTCAAAACTAGAAGCCTCTTGCC AGGAGCTAGAACTGGTAAATTGGTTTGGTTTGGTTCCGAAGCTTTGGCCAAATGCTAAGTACATATATTCCATAATGACA GGTTCTATGCAACCATACTTGAAGAAGCTTAGGCATTATGCAAATGGGTTGCCATTAGTAAGTGCTGATTATGGCTCAAC TGAGAGCTGGATAGGAGTTAATGTGGATCCTGGTTTGGCTCCAGAGAGTGTTACATTTGCTGTTGTGCCCACTTTCTCTT ACTTTGAGTTCATACCACTTTACAGACAGAAACAAGATCATTCAAGTGCTTCAGTTGGGGATGATTTCATGGAAGACAGA CCAATCCCACTATCCAAGGTTAAGGTTGGACAAGAGTATGAAATAGTGCTCACAACTTTCACTGGACTATACAGGTGCAG ATTAGGAGATGTGGTGGAAGTGGCTGGTTTCCACAACGGTACACCAAAATTGAACTTCATATGCAGAAGAAAACTGATTC TAACAATAAACATAGACAAGAACACAGAGAAGGACCTTCAGATGGTGGTGGAGAAAGGGTCACATGTGCTGAACCAGGAA TCCCAAGCAGAGGTAGTTGATTTCACAAGCTATGCCGACGTGTCGAACCCGCCGGGTTGCTATGTTATTTTCTGGGAGAT GAAAGGAGAAACAGAGGAGAAGGTGCTTGAAGCGTGTTGCAGGGAAATGGATGCAGCTTTTGTTGACCATGGCTATGTTG TGTCGAGAAAAACATGTTCAATAGGGCCATTGGAGCTTCGCATTGTTGAGAGTGGAACTTTCAAGAAGATATTGGATTGT TATGTGGCGAGTGGTGCAGGGTTGGGACAGTTCAAGACACCTAGGTGCACCAACAACCCTGTCCTCCTCAACATTCTTAA TGCATGCACCATTAAAACATTCCGGAGTACAGCTTATGGTTCAAACCGACCATGA
Protein sequence (LotjaGi3g1v0442000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPDTSYHSNVNCSGDCDIITWFEDVSMNASSVQTQILCSILKQNYGVEYLKKWLGNYNISEMDASALESLFTSVVPLAS LVDFEPYIQKIADGETGPILTQQPMTTLSLSSGTTEGRQKFVPFTSHSAQTTLQTFTLAAAYRSRVYPTREGGRILEFIY SSNQFKTKGGLSVGTATTHYYASQEFKIKQEKTKSFTCSPYEIISAGDYKQSTYCHLLLGLFFSDQVEFISSAFVYGIVQ AFRSFEEHWRELCSDIRHGTLSPRIKLPQMRDSVLGIITLSNPSLASKLEASCQELELVNWFGLVPKLWPNAKYIYSIMT GSMQPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPGLAPESVTFAVVPTFSYFEFIPLYRQKQDHSSASVGDDFMEDR PIPLSKVKVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTINIDKNTEKDLQMVVEKGSHVLNQE SQAEVVDFTSYADVSNPPGCYVIFWEMKGETEEKVLEACCREMDAAFVDHGYVVSRKTCSIGPLELRIVESGTFKKILDC YVASGAGLGQFKTPRCTNNPVLLNILNACTIKTFRSTAYGSNRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 599 | 587 | 0.0 | – | |
| PANTHER | 13 | 599 | 587 | 0.0 | ||
| Pfam | 22 | 579 | 558 | 6.8E-178 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0442000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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