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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0442000 |
| Transcript ID | LotjaGi3g1v0442000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Indole-3-acetic acid-amido synthetase GH3.3; TAIR: AT4G03400.1 Auxin-responsive GH3 family protein; Swiss-Prot: sp|Q6I581|GH35_ORYSJ Jasmonic acid-amido synthetase JAR1; TrEMBL-Plants: tr|I1LUE4|I1LUE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0442000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85468169..85471394) extracted from Lotus japonicus Gifu genome v1.2.
ACTAGAAGCCTCTTGCCAGGAGCTAGAACTGGTAAATTGGTTTGGTTTGGTTCCGAAGCTTTGGCCAAATGCTAAGTACA TATATTCCATAATGACAGGTTCTATGCAACCATACTTGAAGAAGCTTAGGCATTATGCAAATGGGTTGCCATTAGTAAGT GCTGATTATGGCTCAACTGAGAGCTGGATAGGAGTTAATGTGGATCCTGGTTTGGCTCCAGAGAGTGTTACATTTGCTGT TGTGCCCACTTTCTCTTACTTTGAGTTCATACCACTTTACAGACAGAAACAAGATCATTCAAGTGCTTCAGTTGGGGATG ATTTCATGGAAGACAGACCAATCCCACTATCCAAGGTTAAGGTTGGACAAGAGTATGAAATAGTGCTCACAACTTTCACT GGTAAACACTCATTCTTCTTCTCTTCAATAGATGCTCATTTACATCTAACACTTATTTCTCCTGTACTATGATTTTCGCT AATGTTTCATGATTTGCGAGGAAACCTCACACCTACAGTTTATGACATTTTTTACTCTAATAAACTCTACAATTTTTTGC GGTAAAAAACGACACAAACTATTGGTTTTTTTTTATAGGTAAATGTTAGTTGTTACAAATGTTAGTAAATTAGTCCCTCC TCCGGATTCAAATCCGGGACTCTTCACCCTCACCCCACCCAACCCTTATAACACAAACTATTGGTGTTAATGCCGTACAC GACTCACCTCTCTATAATTTTTATTTAGACACTTCTCACATTCAAATTCAACTTTAATACATTCGCATTCAATTTTTCTT CAATCCCAATTTCACCTCATTTGTTCGCAATTCGCATAGATGTCGTTTTCCCTTTTTAAAATTAGCATTCTTTGTTTTAT TAAAATTAATTTTTTTTTGTTGAGGTGTTTTTGTTCTTATTAGAAGCACGAAGAAAGAATTAACAAGGTAATATAATATA ATTTGAATCCTCTTTAATTATACATGGTAGCACATCACAGAGACAGTTGGTTTTATACTATACTGAGACATTAGATGCAT GAATGAAATACATTCTGCCAATGGGGGGGCCTTTATTTTCTTCGGATATTCTTATCAGTGTTGGCCACAATTTGGCATTG TGTGACCATAACCCACGGGTTGGTTCATACACATGTCGTATTGTAGCTGTCCTTTGTTATTTCAGAACTAATGTTATGTA CATTTCATGACAAGGATTCACCATGACTTTTGATAGTGTGGTCATTTTCAAAATTCCATTTTCCAAAATGTAATTCTTTG GGTTATATAGTGCATTTGTTAGATTATACATACTAATGTTTTCCATAACCACATTGATTTAAATCGGTTGAGGGCATCAG TTCAAAATTTAATAGTCGGATTGTAGGTAAACCAATAGTAGTTAAATAATATTTTTTAAATATACATATGAAATTATATA TAATAAAATATTACACACAATATATAGTTTTTTAACTTTCAATTGAGATGAAAATTAGAATTTTAACCTTCAATATATAG ATTTATATAACATTCAATTTAAGGAATATGGTGCATCATGGATTCATGGTAAAATGATCATTCATGCATGAAATTATACA TAGTCCAAAAAAAAGTGTAAAATGGCCACAACTGATTCAGACTAATTTTTTAATGGTTTTAATTTTTGACTGGTTTACCG GCTTCAGCAAGATCAGTTTTCGTGTGCTGGTTGAACATATAAAACACTTCATCTTTCATCTTCTTAATTTGTTATTGTTA ATATGTATATGAAAAATGATTTATAAACATTTGCAATTTGCATAATAAAAATCTAATAGGCACCCCATAGTGAGAAAGAA ACAAAAAGAAATTGATATGATATATAATAATGAAAAGAAATAGAGTAAAAAGATAGATGTTTGTTGCATGTAAACTCTAT CTGTATGTCTAAATATATATAAAGTTGTGCTGGTTGAAAATACAAAGTCGCAATATCTGAGATGGCACACATGGCAGTTT TATTTTATCAGAACTTGTGAAAAAGAGTAAAACATAATTGTGGCAGTTCTTTCGAACACACAAGTTGTGCCGGTTAAAAA CTGCTCCATGACCTCTATGTCCCCCCGGATGTCATTGTTCTCACAGAGAGTCAGAGAATCATTTTTCTAATACTCTATCC ATTCATTTTTAACAGTACATTTTGAAGAAATTTTTTTTTCTATTTAACTGTCCACTTAGCATTTTAAGAGAACATTAAAT GATGTTTTTATCACAAATGTCATTGTCAGTACAATAAATGAGAAAAGATAACACATACTTTAAAAGGTAAAATAGAAAAA TAATCCTCACTTTTTCTAAAAATCAACAAAATTAATCACATCCTTAATATGTGTGCCTCCACTCAAAGTGGACAGTTAAA TAGGAACGAAGAAAGTATATACAAAGTATCTAATAAAAATTTGTTTACTTTCAGGACTATACAGGTGCAGATTAGGAGAT GTGGTGGAAGTGGCTGGTTTCCACAACGGTACACCAAAATTGAACTTCATATGCAGAAGAAAACTGATTCTAACAATAAA CATAGACAAGAACACAGAGAAGGACCTTCAGATGGTGGTGGAGAAAGGGTCACATGTGCTGAACCAGGAATCCCAAGCAG AGGTAGTTGATTTCACAAGCTATGCCGACGTGTCGAACCCGCCGGGTTGCTATGTTATTTTCTGGGAGATGAAAGGAGAA ACAGAGGAGAAGGTGCTTGAAGCGTGTTGCAGGGAAATGGATGCAGCTTTTGTTGACCATGGCTATGTTGTGTCGAGAAA AACATGTTCAATAGGGCCATTGGAGCTTCGCATTGTTGAGAGTGGAACTTTCAAGAAGATATTGGATTGTTATGTGGCGA GTGGTGCAGGGTTGGGACAGTTCAAGACACCTAGGTGCACCAACAACCCTGTCCTCCTCAACATTCTTAATGCATGCACC ATTAAAACATTCCGGAGTACAGCTTATGGTTCAAACCGACCATGATATAATGCATCATTGCTTTTGTTCCCTTTTTTCTT CCAAATGTATCATGAGGACAGGTTTTGTTCTTGTGAACAAGAGTGAAGTGATTGCCGGAGGCAATGAGCTAGCTAGGACA CCTTTTAAATAAGCAATTCCTTCCTTCGGGCTGTTATATGGTTTTCTTAGTTTAGATTTTCTTTAAGGATGTTGGTGGAT TAGTTTTGAATTTTTGGAGAAAAAGG
CDS sequence (LotjaGi3g1v0442000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAACCATACTTGAAGAAGCTTAGGCATTATGCAAATGGGTTGCCATTAGTAAGTGCTGATTATGGCTCAACTGAGAG CTGGATAGGAGTTAATGTGGATCCTGGTTTGGCTCCAGAGAGTGTTACATTTGCTGTTGTGCCCACTTTCTCTTACTTTG AGTTCATACCACTTTACAGACAGAAACAAGATCATTCAAGTGCTTCAGTTGGGGATGATTTCATGGAAGACAGACCAATC CCACTATCCAAGGTTAAGGTTGGACAAGAGTATGAAATAGTGCTCACAACTTTCACTGGACTATACAGGTGCAGATTAGG AGATGTGGTGGAAGTGGCTGGTTTCCACAACGGTACACCAAAATTGAACTTCATATGCAGAAGAAAACTGATTCTAACAA TAAACATAGACAAGAACACAGAGAAGGACCTTCAGATGGTGGTGGAGAAAGGGTCACATGTGCTGAACCAGGAATCCCAA GCAGAGGTAGTTGATTTCACAAGCTATGCCGACGTGTCGAACCCGCCGGGTTGCTATGTTATTTTCTGGGAGATGAAAGG AGAAACAGAGGAGAAGGTGCTTGAAGCGTGTTGCAGGGAAATGGATGCAGCTTTTGTTGACCATGGCTATGTTGTGTCGA GAAAAACATGTTCAATAGGGCCATTGGAGCTTCGCATTGTTGAGAGTGGAACTTTCAAGAAGATATTGGATTGTTATGTG GCGAGTGGTGCAGGGTTGGGACAGTTCAAGACACCTAGGTGCACCAACAACCCTGTCCTCCTCAACATTCTTAATGCATG CACCATTAAAACATTCCGGAGTACAGCTTATGGTTCAAACCGACCATGA
Protein sequence (LotjaGi3g1v0442000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQPYLKKLRHYANGLPLVSADYGSTESWIGVNVDPGLAPESVTFAVVPTFSYFEFIPLYRQKQDHSSASVGDDFMEDRPI PLSKVKVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTINIDKNTEKDLQMVVEKGSHVLNQESQ AEVVDFTSYADVSNPPGCYVIFWEMKGETEEKVLEACCREMDAAFVDHGYVVSRKTCSIGPLELRIVESGTFKKILDCYV ASGAGLGQFKTPRCTNNPVLLNILNACTIKTFRSTAYGSNRP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 277 | 277 | 3.2E-160 | – | |
| Pfam | 1 | 257 | 257 | 8.8E-89 | ||
| PANTHER | 1 | 277 | 277 | 3.2E-160 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0442000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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