Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0447900 |
| Transcript ID | LotjaGi3g1v0447900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAC domain-containing protein; TAIR: AT4G28500.1 NAC domain containing protein 73; Swiss-Prot: sp|O49459|NAC73_ARATH NAC domain-containing protein 73; TrEMBL-Plants: tr|A0A151SF00|A0A151SF00_CAJCA NAC domain-containing protein 8; Found in the gene: LotjaGi3g1v0447900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86116748..86123592) extracted from Lotus japonicus Gifu genome v1.2.
TTTTCAATGTCAGAGTTGATTCTGACAAAGAAAAAATTAGTTTTTTTTTATCCAAATATGCAATGAGATGGAGATTGTTT TTTGCGTTCTCAAGGTATCCGCACAGTCAGCTGCCATGAAACTTATTTCATCGAGATTTTAATATCATATTAAGTAAGTA TGTCTCTCCGAATAAATATTTCTCCATACGCACCACCCTGAGATTCAACCACAATATATGAGATGGAGATTGTTTTCCAA TGTTGTTTTCTATTTTCTCCACTTACTACACATATGTACACATCAAATTGACACAAAGTGGCGTTTGCTTGAGCCATGTG GCAATAGGTAGTATGCTGCAACTATCAATGAGAGACAGAGAAAGAGAGGTTTCTTGCTATGCATGAGAAGTCCATGTTAA GGAATGAAATCATGGTTGGCTGAAAACTATTTTCTTCAAATTTCTCACCTTAGTTTTCTGGTATTCCAATTTTAACTTTA TCCACACTCCAGGGTGACATTGGACCTAAGTTCTCCTTCTCTGGTGCTTGCACATTAGGTTTCCCCATTCCCACTCAACT CTTCTATGTTCTGTTCTATCCATATTTTAATAATTCCTTTCCAACTTAAAACTGGTTTATTTTAATTTTTAATTTTAATT AAAGATACCTTTAGTCAGACTAAAAAGGGAAATAAATCTACATTTATTCTTCTACAAGTTTCCACTTCCATACAAGTTAA TACACAAAGCAAAACAAAACTTGAGATCCAAGCAATGTTTTATTTTTTTTATTCTTGTCTCTCTGTGCAACTAACCAACC CTGTATCTAATTGTTAATTTCATTCTCTATATTTAGAATGTTTAGGTGTCACTCTCTCCCCTTTCTCGTTTAAGAGCACA TACAAGGTTGCAATTACTCATGCAAAATAAAGCTGAGGGAATTTAATTCCTTCCCACCCCTCAACAAAAACTGGCATGAG GGGAACAACCTTTAGAAGAGACAAGTTTTGCTTTAAATTCATCTCTTAAGTACTCAACCTATCTCTCAGAGTCCCTAGGT AGATCTTGTTTAGTTCCTGTTCCATTTTTCCATAGCAGCATAAAAGGAGAAGAAAGAAGATATCAAGAAATGGAATGAAG GAGAATTGAAAGAGGATAACAATAAGGAAATGACAGCTGAGTGCAGTTACCCTGAAGACAATGATAGCATCATTGTGGAG AGGCGCAAAGATAGCTTAATCAGAACTTGTCCTACATGTGGGCACCATGTCAAGTACCAAGATCAGGTTCAGTACTCAAC ATTTATCATTTTCTTTTTTTCTTTGGTGAAGTTAATGATCTTAGGGTGTCTATTTATAATTTCTTGTCGGGGCGGGTTCA CACATAAGATCGAAACCATCTGTCCTCCGTTTGATGTACTCTTTCCTGTTCCACCAATAAATTATGTCTTGTCATTTAGA AATCAACTATGTAAGATTGTAAGGTTATAACTGTCGTGTCTATACTTTTTTATTGGTGGGATCAGAAAGAAGACACGAAA CGGGGACAAAAGGTCTTAACTCTTAATCCGAATAAATATGAAGTGTTAATGTATGTGGTGTTAATTTATTAGGGTGGTGG AATTCATGACTTACCTGGACTGCCTGCTGGAGTGAAGTTTGATCCAACTGATCAGGAGATTCTTGAACATTTGGAAGCGA AGGTTCGCTCTGATATTCACATGCTTCACCCTTTAATTGATGAGTTCATTCCTACTCTTGAAGGAGAGAATGGAATCTGT TGTACCCATCCAGAGAAGTTGCCAGGTAAATTAAATAATACAAACCACAAAATACCTGCATGTTGTTGATTTTCCATGTC TTGAACTGAACTGAATTTCTGATAAGGAATTTCATACATCTTGGTTTTCATTATATATTGATTTCAAACGAAACTGAAGT GTGATTACGGAAAAATAACAGATCGGAGACACTTTGTTGAAGTAATGCTACTTCAACAAAAAAATGTCTTGGGATGTATT ACTTTTCCGTTTTCATATTTTCTAATAGTAGATTAAACTCAGTCAAGATGTTTGGTTTCATGTTTAAACCTTTTAAAATT ACTACTTCCCAAAAGTTATCTCTAATAGCTTCTTCAAGAATTACTTCTTCCTCAACATGGATTCAAACACACATTTAATT AATCCAATGGTGATATTATAAATGCATGCCCTCAAAAGTTCCTTCAACCAAACCTTCCATTACAGGAATTCGGATTTCTT GCGGTTAGTAAATTTCAAATTCACTGAAGTCAGGGAACCTCAACCATTTGATCCATCACGGACACTAACTTCAGTGAATT CGAGTTTTCTTAACAGTAAGGACTCTGAGTCCTCCATTAAACATGCTACATTTCACATTTCTTAACATCTGCCATAATAA AACTCTTCATTCATAACATATTCTTAGAATCCTTTCACGTGAAATCAGGTCCATGTTTCCTCATGTTATCTCGTTCTTTA GGTGATACCGTTTTATCATGTGACATGAGAGAATGTAATACAGGAGGATCCTAATCCTAATTCTAATTGGTTTTATTGTA TTCTTTGATATGAATATCTAACATCCAAACGATGGCTTTCAATAAATTTTACTGCAGGAGTTGGCAAAGATGGCCAGATT CGCCATTTCTTTCACCGGCCATCGAAAGCCTACACAACAGGAACAAGGAAAAGGAGAAAGGTGCACACAGATTCCGATGG GAGCGAGACCCGGTGGCATAAGACAGGGAAGACTAGGCCAGTCTATATCAGTGGCAAGCTGAAAGGTTACAAGAAAATTC TGGTGCTTTACACTAACTACAGAAAGCAGAGAAAGCCTGAGAAAACAAACTGGGTCATGCACCAGTACCACCTTGGCAAC AATGAAGAAGAGAAGGAAGGGGAGTTGGTGGTCTCCAAAGTATTCTACCAAACACAGCCTAGACAATGTGGTGGTTCTGG TTCACTTATAAAAGACTCATTTCCTGCAAAAGTACTAAATGGTCACGATCAGGTAGCTAATCATAATCATAATAACAGTG GCTATGTTGAGTACTACAGTAATGCTTCTTCTTTCATATCCTTTGATCAAGGGGAACAGCAACATAGGTCTAACAATGCT CAAGTAATTTCGCATTTTGATGGTGCTCCTTTCATTAATCCTTGAAAGAAGTGGTGGATGGAGGTTACAAAATTACAATT GTACTCTGCAATGGAAAAAATAAATTAATAACAGACAGTAGTTAAGGAGGGGAAAAGGCTGCAAAGAATAAGGAGAAATT GCTTCATCTAAACATTATACATACAAAGCAAAGAAAAAGAAGATTTGGTGGCTGTAACTTTTTTCTCTGTTTCTTTTTGT TTTAAAATTTTGTAGCTGTTATCATGCTTTGTACAATGACACCAAACATACATACATGTCAAAGGCTTCATGTCCCTACT CAGGTGAATACTAACCATGAATCTGTACAAACATGACTTTTACCTTAAGCAGATTATGTCTGTTTTACACTGAGTTTCAA TTAGTATATATGTGATTATCATTAATTATATATGGAATTCCAATACTCGAAGAATGTCACCAAAGAAAACAAGTAAAACT TTTGCTTTTCTTGTTCATATGGAGATCACATGACTCTAAGATAAAACTTCTGCTTTTATTGGTCTTTCAATCCTGTTCAT GAATCTTCTGAAATTTCCCCTTCAATTCCTGGGGAAAGCATTTTAGCCTTCAAGAGTTCCATAATTTTCAGAAACAGAAG AAATATAGAGTATTTTTTGTTCTGTGGTTTTGCCATTGATAACTGTATTCCACTTCTTAATAATATATAATGTTTACAGT TGAATTAAATTTAATACAGTAAACCCACTAGAATGATTCAAATGGTTTAAATGGTTGCCCACTAGCATGATTCAAAATTT CAAATGGTTCCGGGCAATCCCTTTACGCAATAGTTGAAACGAATTAAGTGATATCCTTTAGAACTATTCAAACCTGTTCA AACATTTCATTTATAATATCATCCTATCACGTCTTACCTAGCTCCTAAATATCAAGATTGAAGAAAAGTTCCTAGACCTG TTCAAACTTACTTGAACCAACTTCTCGTTCAGCTAATCGATATGTCAAATCCTTCAACACTGGGAGAATTTCAGAGATTC ACACCAAGGATCAAAATCACACATGTTATATAGATAGAAAATTATTACACTCAACCGGGAAATATGGAGTCCTACAACTT CAAGAACCAAGTAACAAAGTGAAGAAGACGCCTATCTTGGACTCAAGTTAAAACAGAACAATTAAGTCGCTTCACTACTA TTACATTTACATCGATGGACTGAATGAAAATTTATGTTTCTATGCAAAATAGCAAACAAACATAAATAGTCACCTTCTCC AAGTCAAAATCTTCTTCTCGGTCATCTTTTTTAACGTTGGCGACAGACCATTCTCCATCACACGTCCTCAGCTGTTTTTG TTAGGTAGGTTTGTTCTGAAATAACGGAATATGGCAACAAAACTGACAAAGTAATTTAAGTGTAGTGGAATCAAGTCACT CAACTTTGAGCCACTGTAAGTACTCTGCAAAGCCTTCAAACTTTGGAAATTGCATTTGCCTTTCGATTCGCATCTTTATG TAGTTAGGATAAAGCGTCTTGCACATCATGTGAGCAAACTTCTAGTCACGCATCACATACTGCACAATCAGAAAATTGAT GTGTAAAAGACAAGGTAGCACTAACAATAATCAAATCACAAAAATTATGTGTGATATACGTAACATTGCTCTCATGATTA ATCATCTTCATTATATTCTTTTCTACTATTATTTGGACATGAAATTTTGTAAGGAAGAACTACTTTTTCCCTAATCATAG CATGAGAACCTAAAGCTCAAAACTACAACAATAGCAATCATAGATGCTCAAGTTTTCAAGGATACCATGTCCATCTTGAC AATCATCCGATTCCGGAGGGTCAAATATACACACTGGCTCGAACAACATTCTGGCACAACCTGTTAACAAGAATATGTCT TTCCACAAAACGTTTCCAATACCATCTCAGACAATATGCAAACTAGAAAGAGTAAAAAGAAGATTTGCATGAAAACATGC TCTGAGGTCGACTGGTAGACTTTCATATACAAGTTGTTTATAGACATTCAATGGATAAACGGAAATTTCATTTTCAACTA ACAATAAGGTGAAAATAAGAAAATTCATAGAAACCATATAGTTTGTACTCATGAAGCTTCAGATAATACCTATAGACTAG ACCACAGGGCTATTGCATCCTTCATAACATCTATACCTAACCATCTACCAAAACATTCTTCATTCTTCAACTCTACTCAC TAGAATGAAAGCAAGAATGAACAGGACCTAAGCTTGCTTGAAGGGTCCACCCTTCAATCAAATGATCTATCAAACTGCAC AATCAAGCTGGAAGCAACCCCAAAAACATACGATTTGGTCCATCAAAGATGTTGCTTGTAGTGGTTCAATCCCCAAAAAT TACCACCCTGTCCTGTCCTGTCCTTAAAATTCTGAACTTGCTAACAAGCTCATTTTAACAAAGTTATCAACAAACAGATC AATGAATGGACCAACGCAATCCAAATAACATATTTCAATGAACCAATGACCAAATTATATATTTTCTTCAGCACTAAATA AACACTTCCCATTATTCTGAAACTCAATTTAACTAAGGAAGCTAAATAAGATGATCAATCAAATTACTAAACAACCAACA CTGTCCAAATTCCAAATGTATTCTAAGAATTTCTCTCTCTCCATAAAATTTAGTTCACAAGTTGTTCTGCACACCAAACT TTGCATACAAACATGCATACTAGAAATATTCTATATATTAGTTCAAAGATATAGACTGAACCACTGAACACGAAATTCAA AACGTTACCATATCACTGTTTCTTCTTCTTCCTCAAAAGATAAACATCAGTCTCCTCATAAGCATACTCAGGATGAAGAT GATCATGAGGGACTTTTTCAACATCAAACACTCGGTGACAGTCTTCCCAGAATCTCGTATGGGCTTCCGGGTCCCTGAGC TGGTAACCAAGCAAAACGACACCGTTTTCAGCAAGGAGGTTCTCCATGGCAGAGATCAACTGAGGAACAGAATCCTCAAT GTAAACAACGTCGGCGGCGATTACAAGATCGAAGGGAGGGTTGAGCGCGTTGATCTGACTAGCGTTGTTCCAGTAGAGAA TGGAGTACTTGAGATTCTTGCGAAGGAGGGGCTTGTTCACCTTGAGATTGCGCTTCAGTGCGGGCATGACGGGGGCGATG TCGGTGAGGACTAGGTCAGTGAGGCCGAGGAGGTAGAGGCCCATGCCGGCGACGCCGCAGCCGCAGCCGAGCTCCACGGC GCGCTTGCCGGCGAAGTTGAGGAGGTGGGTGTAAGGGTTGGGGGTTTCGGGTGGGGTTTGGGCCCAGCGTTCGGCGAATT TGACGAGGATGAGGGAGCATGGCCAGACGGAGGTTCCGACGTGCATGGAGCCGTTGTCTTGGTGTAGAGAGAGGACGCCG TCGCCGACGGGAAGCTCGATCACCGGCGAGTCTGTGAACTTCATTCTCTCTCTCTCTCTCTCTCCGACGAGAAATGTTTT TTTTTTGTCTTTAGGTTATGGGCATAGTCGCATGGTGTGGATTTATGTATGGGCCTATAGTTTTTTTGTGGAAATGGGCC TGGGATATGAAAGGTTGAGACTATGCAAAAAACAATATGAGATTTGTGAAAAGTCCAGAGTCTGGGTAGCAATGCGGGTG AACACGCCCCTGCCCTGCCGCGCAACGCATTCTACTCGTCTAAAG
CDS sequence (LotjaGi3g1v0447900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGCTGAGTGCAGTTACCCTGAAGACAATGATAGCATCATTGTGGAGAGGCGCAAAGATAGCTTAATCAGAACTTG TCCTACATGTGGGCACCATGTCAAGTACCAAGATCAGGGTGGTGGAATTCATGACTTACCTGGACTGCCTGCTGGAGTGA AGTTTGATCCAACTGATCAGGAGATTCTTGAACATTTGGAAGCGAAGGTTCGCTCTGATATTCACATGCTTCACCCTTTA ATTGATGAGTTCATTCCTACTCTTGAAGGAGAGAATGGAATCTGTTGTACCCATCCAGAGAAGTTGCCAGGAGTTGGCAA AGATGGCCAGATTCGCCATTTCTTTCACCGGCCATCGAAAGCCTACACAACAGGAACAAGGAAAAGGAGAAAGGTGCACA CAGATTCCGATGGGAGCGAGACCCGGTGGCATAAGACAGGGAAGACTAGGCCAGTCTATATCAGTGGCAAGCTGAAAGGT TACAAGAAAATTCTGGTGCTTTACACTAACTACAGAAAGCAGAGAAAGCCTGAGAAAACAAACTGGGTCATGCACCAGTA CCACCTTGGCAACAATGAAGAAGAGAAGGAAGGGGAGTTGGTGGTCTCCAAAGTATTCTACCAAACACAGCCTAGACAAT GTGGTGGTTCTGGTTCACTTATAAAAGACTCATTTCCTGCAAAAGTACTAAATGGTCACGATCAGGTAGCTAATCATAAT CATAATAACAGTGGCTATGTTGAGTACTACAGTAATGCTTCTTCTTTCATATCCTTTGATCAAGGGGAACAGCAACATAG GTCTAACAATGCTCAAGTAATTTCGCATTTTGATGGTGCTCCTTTCATTAATCCTTGA
Protein sequence (LotjaGi3g1v0447900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTAECSYPEDNDSIIVERRKDSLIRTCPTCGHHVKYQDQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHMLHPL IDEFIPTLEGENGICCTHPEKLPGVGKDGQIRHFFHRPSKAYTTGTRKRRKVHTDSDGSETRWHKTGKTRPVYISGKLKG YKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGGSGSLIKDSFPAKVLNGHDQVANHN HNNSGYVEYYSNASSFISFDQGEQQHRSNNAQVISHFDGAPFINP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 283 | 281 | 1.6E-168 | – | |
| PANTHER | 3 | 283 | 281 | 1.6E-168 | – | |
| SUPERFAMILY | 44 | 208 | 165 | 4.84E-37 | ||
| ProSiteProfiles | 49 | 208 | 160 | 32.704 | ||
| Pfam | 50 | 189 | 140 | 6.0E-23 | ||
| Gene3D | 58 | 213 | 156 | 2.6E-24 | ||
| MobiDBLite | 122 | 144 | 23 | - | – | |
| MobiDBLite | 128 | 144 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi3g1v0447900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…