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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0450900 |
| Transcript ID | LotjaGi3g1v0450900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heavy metal transport/detoxification superfamily protein; TAIR: AT1G06330.1 Heavy metal transport/detoxification superfamily protein; Swiss-Prot: sp|F4IC29|HIP28_ARATH Heavy metal-associated isoprenylated plant protein 28; TrEMBL-Plants: tr|I3SJR5|I3SJR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0450900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86433529..86435284) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAATTAAACCCATCACTCAGCCATTGAAGCTCTCCTATATATATATGACATATATTTAGCTAGCTAGCTAGAGGCAA ACTCATATTATTGCTGTATTCAGAGAGATACAAATCAACATCATAAAAGTGATTCAAAGTTTCAAACTATACACTACAGG CAAAATGACAGTAAGAAACTCCACTTTCTTTGTCTATTTTTTCGTTTGATATATGTATATCATGCATATTCATATTATCA TATATATATATATATATATATATAAATCAATGTTTCCTTCTTTAATTTCTTTCAGATCACAGAGATGAGAGTACACATGG ATTGTCCTGGATGTGAAAACAAAGTAAAAAGTGCACTTCAAAAACTAAAAGGTATACATACATTATATTGCCTTCATTTT TGGATGCAAAATACCATGTAGATCGCATATTTTTGAAAACCGGTCTGGACGATAAAGGGTTAATTTGGTTGGTTGAACCG AAAACTGTTTATAATCGGTCTATTTGAAAAGAAAAAACTTATAGATTTCATAATAAGGAGAAAAGTTAGATACAATATGT GTTAATATTGTTGCTCAATGAGAAATTCAGCTACTCATTTTCTTATCGATTTATTAATATTTTAATGTGATAAAGAAAAT GGATAACTGGGATTTTAATTATGTCGTAGTATAAATAGCACCTAGAAAACTGTATCTAAGTTCTCTTTATCTCATGATCA ATTAAGAATCGGTCAAAATCAATGCTATATATTGAGCCGGTCGGAACCGATATATTTGAACCGGTCATATTTTATTTCTA GTTCAATTGCTTAATTTTTCATGTATCTGATTCTACATTCTTATTTTCTTTCTCTTCCTTTTTCTTGTGTGCTCTTTACA TGTGTATGGTTTTATTAAGGTGTGGATAACGTTGAAATAGACATGAGCATGCAAAAGGTGACTGTGAATGGGTATGCTGA CCAGAAGAAGGTTTTGAAAACAGTTAGAAAAACTGGTAGAAGAGCTGAACTGTGGCAACTTCCTTACACCACAGATTCCC AGAACCAATATGTTCAACAACACCATTGCAATGGTCCTGTCAACTTCTATGGTTCCCAACCTTCTTCATCTTATAACTAC TACAAGCATGGTTATGATAGCAGTGATCCTCGCTATTATCACTACCCTGCAGGCCAATCTTCCAGCATCTTTGGCCATCA AGCCGGTGCTGCTTTCAGTGATGACAATCCTCACGGTTGCTCAATTATGTGATCTTTCCATTCTAGGACGAAGATTGATC TTCTCTCCCGGTTTGTTGTCCCTATCACGTCCCACCGGCCAATCAAATATTTTTACATGGTTGAATTTTAAATGACATGA TATAGTTTGATTGGTGAGATAAAAAATAAGTCTTTCAAGTAAAATCATATATGTGCTTTTTCATAAAAAGTGTATGAAGC TTTAATTAAAGTTCTGTCCATTTAGACTGTAAATTTTCTCTTGAGTTACTCAAGTATGTGTGCCTTTATAGTCATGTTTG TACCTTTACTTCTTCTACAATTTAAGGTCGAGGTGTTTCCATTATAGGTTCATGAATCATGATGGTGTAGTGATTCTTTA TAACATAATTAAAAATCAACCTGCAGTTTGAATATAATTATTAATTCTAGTCTAAAGGTAATGATGACTTTTTATAAAAG GAGGACTAAATATTTTGTTATTGATGGACTCATAAGATGTATAGTTCCTTGGTTGCTTCTATATTAACTTTGTTGA
CDS sequence (LotjaGi3g1v0450900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCATGCAAAAGGTGACTGTGAATGGGTATGCTGACCAGAAGAAGGTTTTGAAAACAGTTAGAAAAACTGGTAGAAG AGCTGAACTGTGGCAACTTCCTTACACCACAGATTCCCAGAACCAATATGTTCAACAACACCATTGCAATGGTCCTGTCA ACTTCTATGGTTCCCAACCTTCTTCATCTTATAACTACTACAAGCATGGTTATGATAGCAGTGATCCTCGCTATTATCAC TACCCTGCAGGCCAATCTTCCAGCATCTTTGGCCATCAAGCCGGTGCTGCTTTCAGTGATGACAATCCTCACGGTTGCTC AATTATGTGA
Protein sequence (LotjaGi3g1v0450900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMQKVTVNGYADQKKVLKTVRKTGRRAELWQLPYTTDSQNQYVQQHHCNGPVNFYGSQPSSSYNYYKHGYDSSDPRYYH YPAGQSSSIFGHQAGAAFSDDNPHGCSIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 109 | 109 | 9.7E-48 | – | |
| PANTHER | 1 | 109 | 109 | 9.7E-48 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0450900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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