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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR22814
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 98 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.055s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0039469.1
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 12828621 12829956 +
1 domain prediction
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Lj0g3v0039469.2
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 12828996 12829956 +
1 domain prediction
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Lj0g3v0039729.1
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 12888238 12889399 +
1 domain prediction
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Lj0g3v0065739.2
n.a. copper-binding family protein [Arabidopsis lyrata subsp]. lyrata] gi|297822593|ref|XP_002879179.1| chr0 22916132 22918071 +
1 domain prediction
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Lj0g3v0066409.2
n.a. PREDICTED: FK506-binding protein 4-like [Cicer arietinum] gi|502105398|ref|XP_004492796.1| chr0 23383445 23384200 +
1 domain prediction
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Lj0g3v0103719.1
n.a. n.a. chr0 44234775 44235343 +
1 domain prediction
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Lj0g3v0104309.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502174981|ref|XP_004515645.1| chr0 44616941 44618868 -
1 domain prediction
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Lj0g3v0105219.1
n.a. Uncharacterized protein TCM_014746 [Theobroma cacao] gi|508775371|gb|EOY22627.1| chr0 45097900 45100216 +
1 domain prediction
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Lj0g3v0112379.1
n.a. ATFP4-like protein [Medicago truncatula] gi|357462419|ref|XP_003601491.1| chr0 48908209 48909312 -
1 domain prediction
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Lj0g3v0149899.1
n.a. H0112G12.8 [Oryza sativa Indica Group] gi|116310040|emb|CAH67063.1| chr0 69554991 69555783 +
1 domain prediction
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Lj0g3v0200299.1
n.a. copper-binding family protein [Arabidopsis lyrata subsp]. lyrata] gi|297822593|ref|XP_002879179.1| chr0 98796334 98797838 +
1 domain prediction
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Lj0g3v0201629.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502166304|ref|XP_004513852.1| chr0 99730580 99731941 +
1 domain prediction
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Lj0g3v0220539.1
n.a. PREDICTED: leucine-rich repeat extensin-like protein 1-like [Cicer arietinum] gi|502099047|ref|XP_004491376.1| chr0 112945235 112946083 +
1 domain prediction
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Lj0g3v0240899.1
n.a. metal ion binding protein [Cucumis melo subsp]. melo] gi|307135910|gb|ADN33773.1| chr0 125036753 125037053 -
1 domain prediction
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Lj0g3v0244589.1
n.a. n.a. chr0 126891902 126896102 -
1 domain prediction
 –
Lj0g3v0247439.1
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 128242419 128243628 +
1 domain prediction
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Lj0g3v0251469.1
n.a. PREDICTED: microtubule-associated protein 1B-like [Cicer arietinum] gi|502111232|ref|XP_004493993.1| chr0 130428608 130432472 +
1 domain prediction
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Lj0g3v0261479.1
n.a. PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Cicer arietinum] gi|502163578|ref|XP_004512882.1| chr0 135506934 135508359 -
1 domain prediction
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Lj0g3v0270019.1
n.a. PREDICTED: DNA ligase 1-like [Cicer arietinum] gi|502155808|ref|XP_004510199.1| chr0 139908000 139912244 +
1 domain prediction
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Lj0g3v0290599.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502123961|ref|XP_004498327.1| chr0 150885728 150887930 +
1 domain prediction
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Lj0g3v0323589.1
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 168987935 168989330 -
1 domain prediction
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Lj0g3v0324079.1
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 169355886 169357222 +
1 domain prediction
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Lj0g3v0324079.2
n.a. Heavy metal transport/detoxification superfamily protein isoform 1 [Theobroma cacao] gi|508777591|gb|EOY24847.1| chr0 169356261 169357222 +
1 domain prediction
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Lj0g3v0338379.1
n.a. PREDICTED: myb-like protein X-like [Cicer arietinum] gi|502095842|ref|XP_004490551.1| chr0 177180211 177182923 +
1 domain prediction
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Lj0g3v0362109.1
n.a. PREDICTED: leucine-rich repeat extensin-like protein 1-like [Cicer arietinum] gi|502099047|ref|XP_004491376.1| chr0 190861420 190863203 +
1 domain prediction
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Lj1g3v1091080.2
n.a. PREDICTED: myb-like protein X-like [Cicer arietinum] gi|502095842|ref|XP_004490551.1| chr1 13635672 13642961 -
1 domain prediction
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Lj1g3v2765520.1
n.a. PREDICTED: FK506-binding protein 4-like [Cicer arietinum] gi|502105398|ref|XP_004492796.1| chr1 31663945 31666796 +
1 domain prediction
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Lj1g3v3244490.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502106573|ref|XP_004492985.1| chr1 36671922 36674213 -
1 domain prediction
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Lj1g3v3384600.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502130658|ref|XP_004500726.1| chr1 38912137 38913080 -
1 domain prediction
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Lj1g3v4578420.1
n.a. Metal ion binding protein [Medicago truncatula] gi|357510533|ref|XP_003625555.1| chr1 54131269 54133760 -
1 domain prediction
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Lj1g3v4591190.1
n.a. PREDICTED: microtubule-associated protein 1B-like [Cicer arietinum] gi|502111232|ref|XP_004493993.1| chr1 54967575 54969207 -
1 domain prediction
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Lj1g3v4901110.1
n.a. PREDICTED: cyclin-dependent kinase 12-like [Cicer arietinum] gi|502112524|ref|XP_004494359.1| chr1 59430801 59432870 -
1 domain prediction
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Lj1g3v4901120.1
n.a. PREDICTED: cyclin-dependent kinase 12-like [Cicer arietinum] gi|502112524|ref|XP_004494359.1| chr1 59430979 59432870 -
1 domain prediction
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Lj1g3v4919900.3
n.a. Copper chaperone (CCH)-related protein-like protein [Medicago truncatula] gi|357511925|ref|XP_003626251.1| chr1 59761084 59762809 -
1 domain prediction
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Lj1g3v4941820.1
n.a. Heavy metal-associated domain containing protein expressed [Medicago truncatula] gi|357441611|ref|XP_003591083.1| chr1 60088627 60090893 -
1 domain prediction
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Lj2g3v0693500.1
n.a. PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Cicer arietinum] gi|502163578|ref|XP_004512882.1| chr2 11040479 11041729 -
1 domain prediction
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Lj2g3v0693500.2
n.a. PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Cicer arietinum] gi|502163578|ref|XP_004512882.1| chr2 11040479 11041964 -
1 domain prediction
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Lj2g3v0766530.1
n.a. Heavy metal transport/detoxification superfamily protein [Theobroma cacao] gi|508783607|gb|EOY30863.1| chr2 11960508 11965090 -
1 domain prediction
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Lj2g3v0917330.1
n.a. Heavy metal transport/detoxification superfamily protein [Theobroma cacao] gi|508712126|gb|EOY04023.1| chr2 14552202 14553006 +
1 domain prediction
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Lj2g3v1155600.1
n.a. Copper transport protein family [Theobroma cacao] gi|508773750|gb|EOY21006.1| chr2 18319001 18320041 +
1 domain prediction
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Lj2g3v2207710.1
n.a. Heavy metal transport/detoxification superfamily protein [Theobroma cacao] gi|508776473|gb|EOY23729.1| chr2 32877723 32879762 +
1 domain prediction
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Lj3g3v0139580.1
n.a. PREDICTED: stress response protein nst1-like isoform X1 [Cicer arietinum] gi|502147650|ref|XP_004506863.1| chr3 1108251 1113151 -
1 domain prediction
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Lj3g3v1113000.1
n.a. PREDICTED: transcription initiation factor TFIID subunit 3-like isoform X2 [Cicer arietinum] gi|502082120|ref|XP_004487069.1| chr3 14856115 14857261 -
1 domain prediction
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Lj3g3v2248290.2
n.a. PREDICTED: stress response protein nst1-like isoform X1 [Cicer arietinum] gi|502147650|ref|XP_004506863.1| chr3 27852879 27855045 -
1 domain prediction
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Lj3g3v2849060.1
n.a. PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cicer arietinum] gi|502082413|ref|XP_004487159.1| chr3 35187865 35191203 -
1 domain prediction
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Lj3g3v3440310.1
n.a. Farnesylated protein (ATFP6) [Medicago truncatula] gi|357473779|ref|XP_003607174.1| chr3 42167601 42168880 +
1 domain prediction
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Lj4g3v0109490.1
n.a. PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1-like [Cicer arietinum] gi|502079710|ref|XP_004486344.1| chr4 974562 975998 +
1 domain prediction
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Lj4g3v0336930.1
n.a. Chloroplast-targeted copper chaperone protein [Theobroma cacao] gi|508706955|gb|EOX98851.1| chr4 4239507 4240313 +
1 domain prediction
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Lj4g3v0338210.1
n.a. Chloroplast-targeted copper chaperone protein [Theobroma cacao] gi|508706955|gb|EOX98851.1| chr4 4302248 4303973 +
1 domain prediction
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Lj4g3v1286210.1
n.a. Os01g0927300 [Oryza sativa Japonica Group] gi|297598229|ref|NP_001045267.2| chr4 18882448 18883834 -
1 domain prediction
 –