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LotjaGi3g1v0451900.1

Overview

Field Value
Gene ID LotjaGi3g1v0451900
Transcript ID LotjaGi3g1v0451900.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT4G28400.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q93YW5|P2C58_ARATH Probable protein phosphatase 2C 58; TrEMBL-Plants: tr|V7AHR5|V7AHR5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0451900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:86547139..86552123) extracted from Lotus japonicus Gifu genome v1.2.

GCCAAATTAAAGAAAGCTCGTCGGCAAGAACGCGTTTTTGTCAAAGAATGTGGTCTATAAAATAATGCAGCTGGTCACGT GCTCAGAAGTCAAACTTTTACATATTTATACACCCTGCCTTCTCTTTCTTCTTCTGTAAACTCTTGAAATCTGAATCAAC TTCTTCTAGCACTATAGCAATCATGACTGGCAAAGAAATCCTCCAAAAGATGAAGGTACGTAGAGAAAAATATATGCTCT TATGCAAATAATAACATGCCATATATATATATATATATATATATATATTCATTAATATGTGTTACTTGTTTATGGATGTA TGTTGCAAATGCAACTTCTTATCTATAATATTCTGGAGTTCTCTTGAGGTTATGGTATTGTTTGCAAGTAAGTAATGCAA CTTGTTTGTTTTTTTAGCTAGTTTTCTGAACTGTAATTGATGTTTTGGGGTTTAAGCTTTCTTTGTTTAGGCATGGATTT GTACTGAATAGACAAAAATGTTATTGTCTTTTCCATTTCTCTGTTTGCTTAGAAAGTATACTTAAGAAGAGTTTACGATA AATCAGAAAGTTTTCAGTGCATTGCGTTAAATACTTGGTAGGGAAGGAAAACGTTACTACGCATATGATAGGGGTCTTAC CCGACTCGACTCGAATAGTATTGACTTAGTGCAGGATATATGAAGATTCATTAGGAATGTGCTAATAGCATCTAAAACTG CTTATTGCAGAATTAGTGGTCAATGTGCTCATAGTCCTTTCTTTGGATGCTTGTTTGGATTAATTTATTTCAGATAACCC TGTTTTTTCTTCTTCCAAGAGATATTTTATGAAAAAAGAATATTTTTCCAAAAATATAAAATACTGAACCAAAAGTTGAC CATCTAATTGGGAAACTTACCATAAACATACAACATGGCAGTTCAATTGTTTTGTTTTTTACATTTTAACTAAAATTAGA ACTCTATACATATTTTTTATTTTAAGGGCCAAGCTTCCAAATGAGACTGAGATTTACTTTAATCATGTGTCTAGGTGAAA GTTGGGCTTGGAACATCAGTACCAGAAACAGGGAAAGGAAAAGGCAAAACATCAAAACATATTACACATGGCTTTCACTT GATGAAAGGAAAATCAGCCCATCCTATGGAAGATTATTTAGTTTCAGAATTTAAAAAAGACAAGGACAAAGAATTGGGTT TGTTTGCTATATTTGATGGCCACTTAGGCCATGATGTTGCAAGCTATTTGCAGAACCACCTTTTCCAAAACATCTTGAAA CAGGTAACTTTCATATCACTTCAGCTTGGCTACACTTTCATGATCATAGTTATATAGATATTTATTTCAGTTCCAAAATC AATTATGTGGAGAAGCTAGAGAGAGTGTATGACCTCAGAATCAGTTCTTACTCTTGAAATCACTTCTAGATGACAGTGAA GATGTTTGAGAATCATCAGTCATCTTATAGAATTGATTGTAATCCCAAAATAAATTCTGTCATAAGCTAGGGAGAGAAGC TTCTACGTTGATAATAATCAACTGAGTTTTTATAGCTGAATTTCCCGACATTACCTGCAAAAATCACCTTTTTTACAAAT GTATAGAAACATAAATCATTGACACTTTCAAGTTTCAACTAACTTCAACTCTCTTTTACCGTAATCAATCTTATGAAAAT TAAATTCAACTAAAATCAACTTTGACAACGTTGATCCAAACACGGACAAAGTAGCTGCTGTGAACATAATCAACTGTGTG AGTCATAACTGGATTTTCCAACATTACCCTATAGAAATCACTTTTCCGATAATTATTTCTAAACATAAATCATTTCACTT TCAATTCACTTTTACTCGCTTTACCATAATCAATTACGATATGCTTGATCCAAAAATGCACTAAACCAACTTAAAGTGGT TCTTGTATTATTCTATAACATACATTTCTGTTTGGTGCAAGCAGAATGACTTCTGGACTGAAACAGAAATCGCAGTGAAG AGAGCTTATCTTGAAACAGATGAGAAAATACTAGAACAATCACTTGTCTTGGGAAGAGGAGGATCAACAGCAGTAACTGC AATACTGATTGATGGCCAGAAGCTTGTAATAGCAAATGTTGGTGACTCTCGAGCTGTTGTTTGTGAGAATGGAAAGGCAA GGCAACTATCTATTGATCATGAGCCAAGCAAGGAGAAAAAATATATTGAAAGACGTGGTGGTTTTGTCTCAAATCTCCCA GGTTTTTTCAGACTTCAGTAAAATTGAGTTTTGTTAATTGCAGAATGTTCAACATTAAGTGCATGTTTGGAAACCCGTCT GAAAACTATGATGAAGCCAAAATTATAGTGAACAGAAACAACTTTTCTTAGTTTTTGCTTCAGTCCACCATAATTTTAGT TTCACTGTGATTTTCAAATGAGTTTCCAAACTTGGACTAACTTTTATAAGATGATATTTTGAGCAAATATATGATTGAAA TTTTCTGTCCATATGGACTTAAAATTGCATAGGAGAGATGTATTATAATCTTTGCATTCATTTTGGTTCACTTTTCAGAT AGATTTCCATTGGTAATTATGTTAGAAATATATGATACAATCATTCATGTGTATTTCAAATGTTTAACCTCTTGTGATAA TTGTTCAGAGCCTTTATAATCAATTTTTCTTGAGTTCGATTCTTGTTGCCTCAATATTACTCCCTCCGTCCCTAATTATA AGCTAAAGTTGTAAAAATCACACTTATTAAGAAAGCCTTAATTGATGCATTGGTTTTCAAAAAAAATGTACAACTTTCTA TGTTTACCCCTATTTATGATAACACTTTTTCATCATTGTACTACTAATGGTGGTGCTCCACTACCAATAAATGCAAGGGT GAATATGGAAAGAAATATTAACTTTTGCAAGGTTAGCTTATATTTAGTGACACAAAAAAAGTCTCAATGTTAGCTTATAA TTAGGGACGGAGGGAGTATAATAGAATAACTCAATTTTAGAACCTAAGCATATTGCATTGTCTAGGCTCCAAATCTTATG GACTCTTGCATGGTACTAGAAATATAATAAAACCATTCACTTGTCTTCTTTCAATAGTTCAAACTCTGGTTTATGACAAA TTATAAACAAAACTTGGTAATATAGAACTTATGAGTAGTTCTGAATTTCTGCTTCTTGCAGGAGATGTGCCTCGTGTAGA TGGACAGCTGGCAGTAGCAAGGGCTTTTGGTGACAAGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGGTTGTAC AGGATGTAGATCAGCATATAGAGTTTCTCATTCTGGCTAGTGATGGAATATGGAAGGTTAGCTTTTTAAAGACTTTCCTT CTCTTTCAGTTCAGTACATGAATTTTAGTAGACTTCTGAGGCACCAATCAATGAAAATGTGGTAGGGAGGGGAGGGGATT TGGGGAAGTAACAATTAATCACGGCTGTATTTGGATAAACAACTTAATTAAGCACTTATCACATAAGCACTGATGCATAT TGGTTATAGTGAGAAGCTTATTGAAGTAAGCTCGAAATAGTTATAAATAGGTATAAGTTCTTATTCATAAGCGAATTTGA ACAACTTTTGAAAACAAGCTCAAATACGTATGCCTTAAGCACTTTATATAAGTTCCATCAAACACTTGCATAAAAGTTGT AAAGTTCAAATAAGCTCTTTCAAATCTAAGAGACCAAAAAACTTATAGCAGGTTTGGATTAGCTTCTCTTTCATTAGAAT TAACTCTAAATCCTAGAAACTACGCACACAAGCTTATCTCTAGAATTGATCATTGCTTCAATATCAATTGTAAAAGTGTT TCCAAACATGCACACTTACAATATGCTTAGACCAACTTCTCTTTCCTCAAAATCAATTATGACACAGAAAAATAGTCAAC GTAGTTTCTTCCCTGAATTGCTTTTAGCTTCAGAATCACTTCTAGACGAATTTCCAAACATACGCTCACTTAATTTTCTT ACATAGTTCAGCAGTTCCCTTAACTGATCACTTTCTTCCCCATTTATGTTTGCAGGTTATGTCAAACCAAGAAGCAGTGG ATTCTATTAGACAAATAAAGGATGCTCAGGCTGCAGCTGAACGCTTGATTGAAGAGGCTGTTTCCAAGAAGAGTAAGGAT GACATATCCTGCATAGTTGTGAAGTTCCAATGACATTGTACAATGTGTGTATCTCAGATGAACATCTTGTTCTTTTCTAA GCTGAATGCTTTCACAAGTTCATCAGAATTGATCACATGTATAGATGATCCAATCAAACATTTACTTTTTTTTATGAAAT TCTATTAAGCGCGTGTGTCTAAATGAATAGTTATTGCCGCCACTCTTAAAATATGAGTTACGACGAGCTCTGATCTATCT TAAAAACTAATTTATATGTGAGTATTGCTCTATCTTGTATAAGGACTTATTAGCCTTATAACTAGTCGCAGGTTCTGCTG AATCTGTGTGGAATTTTTTAGCCATCTGTATTGGATAATAAATATTAATGAAGGCTACTTTAGATATTGAGTTTTAACTT GTATACATGAATTACAAGAGAAGAAAAAAAATTGTGACTGCCTTGCAAACAAATTAATACTCCTAAGCTGACAAGCCAAA TGATGAAAAATATTTATTAAATATGAAAACACCCACATCATATGTAAAATTCATTGTTTACTGTACTTAATACATTAGGA AGGGATAAAACTCTAATCTTTTATAGCTACAGAGTCTATCTAATTTCATAATAACAACAAACAAGCCACCAAATCAAAGG AGATATACTAAAAGATCATAAGTTGAAGTGTCTCATATCAGGTCTTATATTCTGCTTTATGAGAATCTGGATGGACAAAT TGTTAAAGTTCATGGATTACGAAAATAAAAAGTCAAAAGGATGACGGTGCACATGTGAAAAATGTGTTTATTCGTATAGG CTCATAACAAAATATTTAGATATGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0451900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACTGGCAAAGAAATCCTCCAAAAGATGAAGGTGAAAGTTGGGCTTGGAACATCAGTACCAGAAACAGGGAAAGGAAA AGGCAAAACATCAAAACATATTACACATGGCTTTCACTTGATGAAAGGAAAATCAGCCCATCCTATGGAAGATTATTTAG TTTCAGAATTTAAAAAAGACAAGGACAAAGAATTGGGTTTGTTTGCTATATTTGATGGCCACTTAGGCCATGATGTTGCA AGCTATTTGCAGAACCACCTTTTCCAAAACATCTTGAAACAGAATGACTTCTGGACTGAAACAGAAATCGCAGTGAAGAG AGCTTATCTTGAAACAGATGAGAAAATACTAGAACAATCACTTGTCTTGGGAAGAGGAGGATCAACAGCAGTAACTGCAA TACTGATTGATGGCCAGAAGCTTGTAATAGCAAATGTTGGTGACTCTCGAGCTGTTGTTTGTGAGAATGGAAAGGCAAGG CAACTATCTATTGATCATGAGCCAAGCAAGGAGAAAAAATATATTGAAAGACGTGGTGGTTTTGTCTCAAATCTCCCAGG AGATGTGCCTCGTGTAGATGGACAGCTGGCAGTAGCAAGGGCTTTTGGTGACAAGAGCTTGAAGATGCATCTTAGTTCAG AACCTGATGTGGTTGTACAGGATGTAGATCAGCATATAGAGTTTCTCATTCTGGCTAGTGATGGAATATGGAAGGTTATG TCAAACCAAGAAGCAGTGGATTCTATTAGACAAATAAAGGATGCTCAGGCTGCAGCTGAACGCTTGATTGAAGAGGCTGT TTCCAAGAAGAGTAAGGATGACATATCCTGCATAGTTGTGAAGTTCCAATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0451900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTGKEILQKMKVKVGLGTSVPETGKGKGKTSKHITHGFHLMKGKSAHPMEDYLVSEFKKDKDKELGLFAIFDGHLGHDVA SYLQNHLFQNILKQNDFWTETEIAVKRAYLETDEKILEQSLVLGRGGSTAVTAILIDGQKLVIANVGDSRAVVCENGKAR QLSIDHEPSKEKKYIERRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVVVQDVDQHIEFLILASDGIWKVM SNQEAVDSIRQIKDAQAAAERLIEEAVSKKSKDDISCIVVKFQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF668
2 283 282 1.2E-137 –
PANTHER
PTHR13832
2 283 282 1.2E-137
IPR015655
SMART
SM00332
24 280 257 2.3E-79
IPR001932
Gene3D
G3DSA:3.60.40.10
30 283 254 2.1E-77
IPR036457
SUPERFAMILY
SSF81606
32 282 251 1.24E-69
IPR036457
ProSiteProfiles
PS51746
35 282 248 46.957
IPR001932
CDD
cd00143
36 282 247 2.15119E-85
IPR001932
SMART
SM00331
40 282 243 0.0022
IPR001932
Pfam
PF00481
46 275 230 1.3E-57
IPR001932
Coils
Coil
245 272 28 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0451900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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