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LotjaGi3g1v0451900.2

Overview

Field Value
Gene ID LotjaGi3g1v0451900
Transcript ID LotjaGi3g1v0451900.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT4G28400.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q93YW5|P2C58_ARATH Probable protein phosphatase 2C 58; TrEMBL-Plants: tr|I1LS61|I1LS61_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0451900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:86547931..86551117) extracted from Lotus japonicus Gifu genome v1.2.

CTGAGATTTACTTTAATCATGTGTCTAGGTGAAAGTTGGGCTTGGAACATCAGTACCAGAAACAGGGAAAGGAAAAGGCA AAACATCAAAACATATTACACATGGCTTTCACTTGATGAAAGGAAAATCAGCCCATCCTATGGAAGATTATTTAGTTTCA GAATTTAAAAAAGACAAGGACAAAGAATTGGGTTTGTTTGCTATATTTGATGGCCACTTAGGCCATGATGTTGCAAGCTA TTTGCAGAACCACCTTTTCCAAAACATCTTGAAACAGGTAACTTTCATATCACTTCAGCTTGGCTACACTTTCATGATCA TAGTTATATAGATATTTATTTCAGTTCCAAAATCAATTATGTGGAGAAGCTAGAGAGAGTGTATGACCTCAGAATCAGTT CTTACTCTTGAAATCACTTCTAGATGACAGTGAAGATGTTTGAGAATCATCAGTCATCTTATAGAATTGATTGTAATCCC AAAATAAATTCTGTCATAAGCTAGGGAGAGAAGCTTCTACGTTGATAATAATCAACTGAGTTTTTATAGCTGAATTTCCC GACATTACCTGCAAAAATCACCTTTTTTACAAATGTATAGAAACATAAATCATTGACACTTTCAAGTTTCAACTAACTTC AACTCTCTTTTACCGTAATCAATCTTATGAAAATTAAATTCAACTAAAATCAACTTTGACAACGTTGATCCAAACACGGA CAAAGTAGCTGCTGTGAACATAATCAACTGTGTGAGTCATAACTGGATTTTCCAACATTACCCTATAGAAATCACTTTTC CGATAATTATTTCTAAACATAAATCATTTCACTTTCAATTCACTTTTACTCGCTTTACCATAATCAATTACGATATGCTT GATCCAAAAATGCACTAAACCAACTTAAAGTGGTTCTTGTATTATTCTATAACATACATTTCTGTTTGGTGCAAGCAGAA TGACTTCTGGACTGAAACAGAAATCGCAGTGAAGAGAGCTTATCTTGAAACAGATGAGAAAATACTAGAACAATCACTTG TCTTGGGAAGAGGAGGATCAACAGCAGTAACTGCAATACTGATTGATGGCCAGAAGCTTGTAATAGCAAATGTTGGTGAC TCTCGAGCTGTTGTTTGTGAGAATGGAAAGGCAAGGCAACTATCTATTGATCATGAGCCAAGCAAGGAGAAAAAATATAT TGAAAGACGTGGTGGTTTTGTCTCAAATCTCCCAGGTTTTTTCAGACTTCAGTAAAATTGAGTTTTGTTAATTGCAGAAT GTTCAACATTAAGTGCATGTTTGGAAACCCGTCTGAAAACTATGATGAAGCCAAAATTATAGTGAACAGAAACAACTTTT CTTAGTTTTTGCTTCAGTCCACCATAATTTTAGTTTCACTGTGATTTTCAAATGAGTTTCCAAACTTGGACTAACTTTTA TAAGATGATATTTTGAGCAAATATATGATTGAAATTTTCTGTCCATATGGACTTAAAATTGCATAGGAGAGATGTATTAT AATCTTTGCATTCATTTTGGTTCACTTTTCAGATAGATTTCCATTGGTAATTATGTTAGAAATATATGATACAATCATTC ATGTGTATTTCAAATGTTTAACCTCTTGTGATAATTGTTCAGAGCCTTTATAATCAATTTTTCTTGAGTTCGATTCTTGT TGCCTCAATATTACTCCCTCCGTCCCTAATTATAAGCTAAAGTTGTAAAAATCACACTTATTAAGAAAGCCTTAATTGAT GCATTGGTTTTCAAAAAAAATGTACAACTTTCTATGTTTACCCCTATTTATGATAACACTTTTTCATCATTGTACTACTA ATGGTGGTGCTCCACTACCAATAAATGCAAGGGTGAATATGGAAAGAAATATTAACTTTTGCAAGGTTAGCTTATATTTA GTGACACAAAAAAAGTCTCAATGTTAGCTTATAATTAGGGACGGAGGGAGTATAATAGAATAACTCAATTTTAGAACCTA AGCATATTGCATTGTCTAGGCTCCAAATCTTATGGACTCTTGCATGGTACTAGAAATATAATAAAACCATTCACTTGTCT TCTTTCAATAGTTCAAACTCTGGTTTATGACAAATTATAAACAAAACTTGGTAATATAGAACTTATGAGTAGTTCTGAAT TTCTGCTTCTTGCAGGAGATGTGCCTCGTGTAGATGGACAGCTGGCAGTAGCAAGGGCTTTTGGTGACAAGAGCTTGAAG ATGCATCTTAGTTCAGAACCTGATGTGGTTGTACAGGATGTAGATCAGCATATAGAGTTTCTCATTCTGGCTAGTGATGG AATATGGAAGGTTAGCTTTTTAAAGACTTTCCTTCTCTTTCAGTTCAGTACATGAATTTTAGTAGACTTCTGAGGCACCA ATCAATGAAAATGTGGTAGGGAGGGGAGGGGATTTGGGGAAGTAACAATTAATCACGGCTGTATTTGGATAAACAACTTA ATTAAGCACTTATCACATAAGCACTGATGCATATTGGTTATAGTGAGAAGCTTATTGAAGTAAGCTCGAAATAGTTATAA ATAGGTATAAGTTCTTATTCATAAGCGAATTTGAACAACTTTTGAAAACAAGCTCAAATACGTATGCCTTAAGCACTTTA TATAAGTTCCATCAAACACTTGCATAAAAGTTGTAAAGTTCAAATAAGCTCTTTCAAATCTAAGAGACCAAAAAACTTAT AGCAGGTTTGGATTAGCTTCTCTTTCATTAGAATTAACTCTAAATCCTAGAAACTACGCACACAAGCTTATCTCTAGAAT TGATCATTGCTTCAATATCAATTGTAAAAGTGTTTCCAAACATGCACACTTACAATATGCTTAGACCAACTTCTCTTTCC TCAAAATCAATTATGACACAGAAAAATAGTCAACGTAGTTTCTTCCCTGAATTGCTTTTAGCTTCAGAATCACTTCTAGA CGAATTTCCAAACATACGCTCACTTAATTTTCTTACATAGTTCAGCAGTTCCCTTAACTGATCACTTTCTTCCCCATTTA TGTTTGCAGGTTATGTCAAACCAAGAAGCAGTGGATTCTATTAGACAAATAAAGGATGCTCAGGCTGCAGCTGAACGCTT GATTGAAGAGGCTGTTTCCAAGAAGAGTAAGGATGACATATCCTGCATAGTTGTGAAGTTCCAATGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0451900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAAGGAAAATCAGCCCATCCTATGGAAGATTATTTAGTTTCAGAATTTAAAAAAGACAAGGACAAAGAATTGGGTTT GTTTGCTATATTTGATGGCCACTTAGGCCATGATGTTGCAAGCTATTTGCAGAACCACCTTTTCCAAAACATCTTGAAAC AGAATGACTTCTGGACTGAAACAGAAATCGCAGTGAAGAGAGCTTATCTTGAAACAGATGAGAAAATACTAGAACAATCA CTTGTCTTGGGAAGAGGAGGATCAACAGCAGTAACTGCAATACTGATTGATGGCCAGAAGCTTGTAATAGCAAATGTTGG TGACTCTCGAGCTGTTGTTTGTGAGAATGGAAAGGCAAGGCAACTATCTATTGATCATGAGCCAAGCAAGGAGAAAAAAT ATATTGAAAGACGTGGTGGTTTTGTCTCAAATCTCCCAGGAGATGTGCCTCGTGTAGATGGACAGCTGGCAGTAGCAAGG GCTTTTGGTGACAAGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGGTTGTACAGGATGTAGATCAGCATATAGA GTTTCTCATTCTGGCTAGTGATGGAATATGGAAGGTTATGTCAAACCAAGAAGCAGTGGATTCTATTAGACAAATAAAGG ATGCTCAGGCTGCAGCTGAACGCTTGATTGAAGAGGCTGTTTCCAAGAAGAGTAAGGATGACATATCCTGCATAGTTGTG AAGTTCCAATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0451900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKGKSAHPMEDYLVSEFKKDKDKELGLFAIFDGHLGHDVASYLQNHLFQNILKQNDFWTETEIAVKRAYLETDEKILEQS LVLGRGGSTAVTAILIDGQKLVIANVGDSRAVVCENGKARQLSIDHEPSKEKKYIERRGGFVSNLPGDVPRVDGQLAVAR AFGDKSLKMHLSSEPDVVVQDVDQHIEFLILASDGIWKVMSNQEAVDSIRQIKDAQAAAERLIEEAVSKKSKDDISCIVV KFQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.60.40.10
1 243 243 3.5E-77
IPR036457
PANTHER
PTHR13832
1 243 243 3.2E-118
IPR015655
ProSiteProfiles
PS51746
1 242 242 46.782
IPR001932
PANTHER
PTHR13832:SF668
1 243 243 3.2E-118 –
CDD
cd00143
2 242 241 9.1586E-84
IPR001932
SUPERFAMILY
SSF81606
2 242 241 4.32E-68
IPR036457
SMART
SM00332
3 240 238 9.7E-75
IPR001932
SMART
SM00331
6 242 237 0.0041
IPR001932
Pfam
PF00481
6 235 230 9.5E-58
IPR001932
Coils
Coil
205 232 28 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0451900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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