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LotjaGi3g1v0453100.1

Overview

Field Value
Gene ID LotjaGi3g1v0453100
Transcript ID LotjaGi3g1v0453100.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Dihydroorotase; TAIR: AT4G22930.1 pyrimidin 4; Swiss-Prot: sp|O04904|PYRC_ARATH Dihydroorotase, mitochondrial; TrEMBL-Plants: tr|A0A0R0JV11|A0A0R0JV11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0453100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:86644790..86650233) extracted from Lotus japonicus Gifu genome v1.2.

GTTTATGACCTTTGATCTGACTTAAGTCACTTTAATCTCAGAGTTTTTGGCCATCCATAAATTGTGCTTTCACAGCTTCA TATGAAGTATTAGGCGTTCATTCAAACTTTTAAGATTTTGAGTTGAGCTCTAGGTTTAAAGCCCTCTCATCAGTTGTTTC TCTACCTCTTAGGCGTGTATTGCCCCAGATCCATCTTGTGGTCCAGAAAATTCCAGTCTTAAAATTATAATAATTATATA CTGCCAAGTCAATCTCAACCGTGAGATTAATCTAATGGTTGGAATTAAAGAAGGTTTTTCCAAACAGAAACTCAATAAAC CTCTCCTCCTCTCGCCGCACTTGGTCTGGTCCGCATTGTTCCGCCGCGCACAGTAGCGTTAAGCCACCGCTCCGGCCACC TGTCACCGCCGTGATTCCTATCGTTTGCAGAGCATCCTCGCCGGAGGCTGTGTTCTCTTACTGTAAGTTGCAAATCCTTT TTCAAATTCTCTTCGTTGTTAACCCTTCAACGTGTCTGATTGATTTCAATGTCGTAGCATGTGTTAATTAAGCTAAAGTT AGATTCTTTTTTCCTCTTCCTTTGATTTGGAACTGGTGGGCATCTTGAATTATAATCATAATTCATAGCTAGAGTGTACT AGGAGACCCCAATTTGGTTCATTTCATTTCTCTGTCTATTTTCTGTGTTCATTTTGTGTTCTCTTTTACAAAGATTTGTC CAAGTTGAAGGCTTAGGATGAGTGGTTGTCCTTGTAGCCATCTCTTGGATGAGTTGTTGTTGTTGTAGTAGTAAGTGGTT GTTGAGTTGCTGGCTTGGTTCTCCAGCACCAATTTGAAAACAATAGACCAATTTATTTTCATTTTATAAGTGCATTGCAG ATACTATGAGGCCTCCTTTTACCTTTCTCTTTTTATTGGAACGGCTGATTACGCTCTTTGATTACAATTTTATTTGACTA ACTCATCATGGTGTGAATTGCATCACTTGGCCAACTTTCTTAGGAGTTTTGCACTAGGCAAGCTTTAGGAAGAAGGACAA CCGTTTTTTCAGTCTGCACTTATAAAAATAAGTTGAAATGTAACACATTTTCAAATTTCATCAGGAAAAAAAAGGAATAG CCTTTCCCCACAAGTAGGGGATGTACATGTGCATATGATATTGGTTAAACTTTAGAGGATATATTGACTTTATTCCCATT GATTACTGTAATAGTTGATGTTTTTGAATAAGTTGGGTGAGATGTATCAGGGACTTAGTTTAACATCGATGCTTCATAAT ATATGCTTTCTCTCCTAATCCTTTTCACTTTTGTTTTCCATTTTTCTTTTGTTTTAAATTTCCTTATGTTTCTCCTATCC TCCTTTTTGAAGTACAGAGAAACCTTGTTATCTTAGTTTAAATTGAAGAAACAAAATTCTTAAACAAGTTAATTCTTTAT TAAATTCTGAATTAATTATTTAAACAAAACCTTATAAATGAAGGGACTTAAATTTTTCAAATACATAATCCAAACACAGG ATAAAGGTTTTCCCTCGCAGAGTTAGTTTCCAATTCTTCATTTCAGTTCATTTTCCTTTATTGCGCCTTACATTTTGTTC TTCTTTAAATCTTAGTTGTCCTACCAAGTACCAACTATATCTACTTTAGTTCTTCTAATCAAGTTTTCCTCAATCAAAAT GACTACCCCCTCACTGTTCTTGCCTTTCACCAAGTTTGACATTTTCTTCATCCTTTGTTTTAAGAAAAAGATATTATCAG TAATTTTTTGCTATTGTATTTTATTTGACAATAGCTGTAGATAAGGAAAGACATTGATTTGAAAGGAGTTAATCAGACTG GAGAAAGGTTGGATAGAATAGGCACAACACTTTCCTCACCTGATAATTCTGCTAGGGCTTATTTGGTTGTTACCCTTCTG TTATAGGTATTAAGGCTCTAATATAGAAGATTGATAAGGACAACGATGGAGCTCACTATTGTTCAACCTGATGATTGGCA TCTTCACCTCCGTGATAGGGCCCTCCTTGAAGCTGTCATCCCTCACAGGTCATTTCGCTTGTTATAGGAAAAACACTCCA TGATATTCTGTTATTTCCTAATTTTTTGTGGGGTCAATGTAAGGAATACTTGCACACATCACATTTTTATAGTTTGGTGT TCATTTTTTTACTGCATTCTCAATGATATTTACAAGTATTCTGATTCATAACTATCACTCCCACAGTGCAAAGCATTTTG GAAGGGCTATAGTAATGCCGAATTTGAAACCACCCATCACCACCACAGCTGCTGCTATTGCTTATCGAGAGTCCATTTTG AAAGCAATACCTAAAAATAGCAACTTCACTCCTCTGATGACACTTTACCTAACAGATATGACAACTCCTGATGAGATTAA ACTTGCAAGTGAGTCTAATAAGTGGGTTAGGCAAATTTAAGAAATATTACCAATGAAATATGAAAAGGAGAAAACTTTAG CTGTGTCAGTAAATTTAATTTGTCTAATATACTTTTATATTTGTAAGTTTTGCTCTGAATCCAGTTAAATGAAAATTCTG TTATCTTCTTTTACCTTGTAGGCTGTAGCTTTTACTTCTTTTTGACCAGTCTGTATTTATTGTGTATGATGATGTCCGTT CAATCCACTTACAAATTTCTTTCCTGTTGGCAATGACAATCAATAATCATTTATCATTTTATTAGATCACACTCTCTTTG TCAATCCACCTTTGACCATTTTTATTGCGTAGTAATATAGTGCACTACTTAACGATGGTGCTTGCATTTACAGAAAAAAG TGGAGTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCAACAACAAACTCCCAAGATGGTGTTACAGATATTTTTGGAA AATGTTACTCTGTTCTTCATGAAATGGTTGAGCAAGATTTGCCATTATTGGTAATTTATTTATTTTTAATTGTAGCTCTG TTATGTTTCTTTCTTTATATTGTCTCTCCTTTCCCCAATTTTTCATTTGTTAGTGTGTGTGAGAGATTATATTTAATGTT CCTGACTAATGTATGAAAATCTATTTCATGCTTTATGTCGCCATGCTTGTCGTGATTAAAGATTCTTGATTCGGAATCAT TTATGACGAGTTAAATTGTTCATGAATCAATCGTTACACCTTTGTAGTAGAACGTATTATTTTGGACACAGATTTCAGAG CTGGTCCAAATGAAAATATATACAACTCTTCAATTCTTAACTATGAGCTGGGCGGTGCTCATGGCAAGCCAACCATGGCC CACTGACATGTTTCCTTCTTTATGTATGTTCTTATTTATATATATCTACTCAAAACTTGTATTGTGCATTTTTTATTTTT TATATGTGAATCAATATCCGTGACAGGTTCATGGAGAGGTTACAAATCCAGAAGTTGATGTTTTTGACCGGGAAAAGGTC TTCATTGAAACTATCTTAGAGCCTTTAGTTCAAAGGCTTCCACGGCTGAAGGTTGTGATGGAGCATATTACCACCATGGA TGCTGTTAAATTTGTAGAATCTTGCAAAGAAGGTATTGTAATAAAATACATGTGAGAGCCTGTGTCATAGTATTCTACTG GCCAGATGTAAAATCCTCATGATTTGCTATTTTTTTAGGTTATGTTGCAGCAACTGTGACACCACAGCATCTTTTTCTCA ATCGTAATGCTTTGTTCCAAGGTGGCTTACAACCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCACAGTATG TAATTTTGATTTCTTTCCCATACTGCCTAGAAAGTTTCAAGTTTCAACATATTGTAGGTTTTCTATTGAACTTTTTGGTT GAGATTTTGAAATAATGATTCAGTGACAAATTTTAAAAACTTGAAGTAATGATTTAAAAGTTATGAATTAGATTTCTCTT CTGGTGTTACGTTGTCTTAAGTAAATTAATCAGATCCCTGATTTATCTGACTTGTATGGGAAAAGAGAAATATGTTTTTA GCACATTGAATGGTCTTTGAAGTTTGAGCATCATTATTCTTCTGTAAATTTTAACTTGGCTGCAGAGAATACACAATCTG ATTGAATAGTTTTAGACTTGATTGACTAATTCTAAGTTAGTTTAAATAAATGTCACTGAGGAATGAGGACAAGGATCATC TTTTAGACAAGTCTGTTACCGAACTGTACATGTCTTGTCATCTTATCTTGAAGCTTACTTTCTTTAGTTCTTTTTTAGGA CAGGCCATTGTTTCAGCTGTCACTGGTGGAAGTACACGGTTTTTCCTCGGAACTGATAGTGCTCCACATGATAGGCGTAA CAAGGAATGTTCGTGTGGATGTGCTGGCATATACAACTCCCTGGTTGCTCTATCCATATATGCGAAGGTTTTTGAAGAGG TAACACTTATTGTAATGCTTGTAATATAATATGCCAAAGTTGGTATTAGTGTATTCTTTTCACAAGAGCGCATTTGGGTG GTTGAACTGGGATATATGCTTGAGTTTTCGAGATTAATCAGCATTTAGAATCTTATTTTGGATGTTTCCTTCTGAAAGTG TGAGGAGTTTAATCTGTATGTCTTATGAAATTGTTGTTTTATAGGCTGGTGCACTTGATAAGCTGGAGGCTTTTACAAGT TTTAATGGACCTGACTTCTACGGCCTCCCCAGAAACAAGCTAAAGATTAAACTGAGGAAAGCTCCTTGGAGAGTACCTGA GTATTTGTCATTTCCATTCGGAGATATTGTTCCCATGTGTGCTGGTCAAACACTTGAATGGGAGGCGTTGCTTAATTAAG TGGTGTGTCTATTTGAAAGTTTGGTATCTTCAGGCTTAAATTAGTGGTTGTTGAGATGAGAATTTATGTAGAGTTCTGAA CTGTGATCAGTTGATTCTGTTTTGAATTCTACAGATTTCTTGCAAAGAAATGTTGTTTGTAGACTTATATTTATCTGCTT TCTGTTCAACTTTTACATGGAAATTATTGATGCTATCCAGACATGTAATTTGAAATTCCAGGTCCATTGTTGTTGACATA ATGCTAGCTAACAGGGAATATGTGAGGAATAAGTGGAAAAGAGAATGCTACTTGGATCCCTATAGTTGCATAACGCAATT TCTCCTGTTTCTTGGCATTACTGTTTTGCTGAAAATTACAAGGAGGAAAGATTCTGGCAGTCCTTTCATTTGGCATCGAA GTCGTACCATCACTATTTTAAAAGGCCATGGCCAGAACTTTTGAACTCATACCTCACAGTGCTTTAGTATTAGTATATAT TGAGAATGTTCTTTTGTTCTCTGAAGCAAGTTGATTATGTTACTGTTGTAATTATTCATCGCCCATATTTCCAACAGGTG TCCACTAGGGTGGACCATTTATATTTTGGTCCACCCATGCACTATCCTTAAACACCATTGGATTAGCAAATCTTAGAATA TTCT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0453100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGCTCACTATTGTTCAACCTGATGATTGGCATCTTCACCTCCGTGATAGGGCCCTCCTTGAAGCTGTCATCCCTCA CAGTGCAAAGCATTTTGGAAGGGCTATAGTAATGCCGAATTTGAAACCACCCATCACCACCACAGCTGCTGCTATTGCTT ATCGAGAGTCCATTTTGAAAGCAATACCTAAAAATAGCAACTTCACTCCTCTGATGACACTTTACCTAACAGATATGACA ACTCCTGATGAGATTAAACTTGCAAAAAAAAGTGGAGTTGTTTATGGTGTGAAGTTGTATCCTGCTGGTGCAACAACAAA CTCCCAAGATGGTGTTACAGATATTTTTGGAAAATGTTACTCTGTTCTTCATGAAATGGTTGAGCAAGATTTGCCATTAT TGGTTCATGGAGAGGTTACAAATCCAGAAGTTGATGTTTTTGACCGGGAAAAGGTCTTCATTGAAACTATCTTAGAGCCT TTAGTTCAAAGGCTTCCACGGCTGAAGGTTGTGATGGAGCATATTACCACCATGGATGCTGTTAAATTTGTAGAATCTTG CAAAGAAGGTTATGTTGCAGCAACTGTGACACCACAGCATCTTTTTCTCAATCGTAATGCTTTGTTCCAAGGTGGCTTAC AACCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCACAGACAGGCCATTGTTTCAGCTGTCACTGGTGGAAGT ACACGGTTTTTCCTCGGAACTGATAGTGCTCCACATGATAGGCGTAACAAGGAATGTTCGTGTGGATGTGCTGGCATATA CAACTCCCTGGTTGCTCTATCCATATATGCGAAGGTTTTTGAAGAGGCTGGTGCACTTGATAAGCTGGAGGCTTTTACAA GTTTTAATGGACCTGACTTCTACGGCCTCCCCAGAAACAAGCTAAAGATTAAACTGAGGAAAGCTCCTTGGAGAGTACCT GAGTATTTGTCATTTCCATTCGGAGATATTGTTCCCATGTGTGCTGGTCAAACACTTGAATGGGAGGCGTTGCTTAATTA A
Download CDS Sequence

Protein sequence (LotjaGi3g1v0453100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MELTIVQPDDWHLHLRDRALLEAVIPHSAKHFGRAIVMPNLKPPITTTAAAIAYRESILKAIPKNSNFTPLMTLYLTDMT TPDEIKLAKKSGVVYGVKLYPAGATTNSQDGVTDIFGKCYSVLHEMVEQDLPLLVHGEVTNPEVDVFDREKVFIETILEP LVQRLPRLKVVMEHITTMDAVKFVESCKEGYVAATVTPQHLFLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTGGS TRFFLGTDSAPHDRRNKECSCGCAGIYNSLVALSIYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKLKIKLRKAPWRVP EYLSFPFGDIVPMCAGQTLEWEALLN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43137:SF2
1 343 343 8.2E-215 –
PANTHER
PTHR43137
1 343 343 8.2E-215
IPR004721
PIRSF
PIRSF001237
1 345 345 2.9E-145
IPR004721
Hamap
MF_00219
1 344 344 45.99
IPR004721
Gene3D
G3DSA:3.20.20.140
2 344 343 2.2E-108 –
SUPERFAMILY
SSF51556
2 342 341 6.81E-140
IPR032466
TIGRFAM
TIGR00856
2 342 341 4.3E-142
IPR004721
CDD
cd01294
3 341 339 0.0
IPR004721
Pfam
PF01979
10 307 298 3.9E-25
IPR006680
ProSitePatterns
PS00483
246 257 12 -
IPR002195

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004151
Molecular function Dihydroorotase activity Catalysis of the reaction: (S)-dihydroorotate + H(2)O = N-carbamoyl-L-aspartate + H(+).
Subterm of
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of
GO:0016812
Molecular function Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide.
Subterm of
GO:0019856
Biological process Pyrimidine nucleobase biosynthetic process The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0453100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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