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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0455100 |
| Transcript ID | LotjaGi3g1v0455100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GH3 family protein; TAIR: AT2G47750.1 putative indole-3-acetic acid-amido synthetase GH3.9; Swiss-Prot: sp|O82243|GH39_ARATH Putative indole-3-acetic acid-amido synthetase GH3.9; TrEMBL-Plants: tr|V7BDE0|V7BDE0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0455100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86843088..86848257) extracted from Lotus japonicus Gifu genome v1.2.
AAGTCATTACGTGGTTTACGAGTACATATATACTTAACACCTCTGTAGTTCTCTTTCTTCTAGTGAGGATGGACGGAAAG AAATTGGAGTACAAAGGTGAGGCGGCACTGAAGGAGATAGAGAGGATGACAAAGAATGGTGTTGAAATTCAGGAAAGCCT TTTGAAACAGATATTAACTCAGAACAGAGAAACAGAGTATTTGAATAAGTACATTAAGAAGGGAGATCTTGTAACAACTG ACGTCATAGCAGAGTTCAAGCTTCATGTTCCAGTTATTAGTTATGAAGAGATCTTGCCATATATCCAGAGAATTGCAAAT GGGGAAGCCTCTTCTCTCATCACTGCTCAACCAATAACAGAGATGTTATGCAGGTAAATGATCCATATGAGACAAATATA TTGATTCTTCAAAAAATATATAAATAAATTATGAGGTGAGTATTGGAGTGTATTATTTATGTTAATAATAATGTTGAGTT CTCTATCCATTTCCTGATTTGTCTTGTTTAAATGTGAAGAAGAAATGAAATAAACAAGTGATATGATATGATATGTGATG TGAAAGGAAATGCAATATAGATTAAAAGAAAAATGAATGAAAATGAGATGAAAGAGAAAATGAAATGTGAGCGATTATAT CATTACTCTTTATGTTAGTGATTTGAAATAATTTGTGCAGTTCAGGAACATCAGGAGGAAAGCCTAAACTGGTGCCAATA GTTGCTGAAGATCTTGACCGTCGAACCTTTTTGTACAATCTCATCATGCCAATCATGAATAAGTTAATATTAACATCTTT CTTATATCTTGACGTTTTTATGTTCATTCTAGGCCTGTCCAACTTTTTTGGGCCCGACCGAAACCGACCGGCCCGCTACC AAAAAAGGCCTTTTTCGGTTCGGTCGGGTCGGGTGGCGGGTTGAGTAATGAAAAAAACCGGCTCCATTTGGGTTGGTTCG GTCGGTTACGGTTTGGAGCCTGGTCCGACCGAACCGACCGAACCCAATATAAAAAAAAATATTCACCCGGCCCAATAAGG CCCAAACCCAACCCACCCAAACTAAACCTAATAATATCCGGCTCCTCTCTCTTTCTCTTCAGTCTTCACCTCTTCCTCTT CTTCTTCTTCTCTCAATTCTCAAACCCTCAAACCCGCCGCCGCCACCACCCTTCTCCTCTTCTTCTTCTTCTTCTCTCAA ACCCTACCTCTCAAACCCGCCGCCGCCACCACCCTTCTCCTCTTCTTCTTCTTCTCTCAAACCCTACCTCTCAAACCCGC TGCCGCCACCACCCTTCTCCTCTTCTTCTTCTTCTCTCAAACCCTACCTCTCAAACCCGCCACCACCACCCTTCTCCCCT TCTTCTTCTTCTCTCCAAACCCTACCTCTCAAACCCGCCACCACCACCCTTCTCCCCTTCTTCTTCTTCTCTCCAAACCC TAGCAGCCACCACCCTTCTCCTTATCCTCTGCGCCGCCATCCTCTGCGCCCTCACACATCTCAAACCCTAGCGGCCTAGC CACTCCACCACCACACTCCACAGTTCTCCTCATCCTCCCGCCACCACCCTTCTCCTCCTCCTTTCCGCTGCCACTTCAAC ATCTCCATCACCCATCTCAGAATATCCTCAGTCCTCACACATCTCAAAAGTCAAACCCTAGCCACTCCACCACCACAGTC ACAGTGCATGGCTTTTTCCTTCACACGTCTCAAACCTCCATGCTTCTCTGATCCGAAATAGTTTGTTCATCTTCATTGCC ATCGATTCTGATATGAAATCGCAAGGATGAAGTGAACAATCTATTTCGCATGAGGAAAGCAATGGAAAACTTGGTAGTTG GTATCTCCGGATCTGATCTGACACTTGTTCTTGGTTTTTTCTTATTCTTGGTTTTTTTTTTTGATAAGCTGATTTTGTTC TTAGTTTAATGAAATTAGGGTTCTATGTTGAACCCGACCGACCCGCCTCATAACCCGACCAACCCGAAACCGACCCAAAC CGAAACATCTCACGGTCGGTTACGGGCCCAGTTTTGTGTCATGCGGGTTCGGTCGGTGGAGCTTTTTGGGCCCGAAACCG ACCGAACCCGACCGGTGGACACCCCTAGTTCATTCATTTTGGCTAAATGGCCAAAAGAAAAAGGATAAGATAATAAGATA CGACATCCATTATAAAATACCACACATGCACTAAAATCTCGTTTTTACACAACTCAATTACTATAAATTATTTTTAAAAA AATGACTTTAAATATTTATTTTCAATAGAGATTTTATTAACATCTTTATTTCAATTAATTATTTGAAAACTTTACTTACC GATAGAGATTTTATTGCATGATAACTATTATCATGGGTTATTTAGACAACCCCTTCTTGATTTTTCATTGTAACATTTAT TATTTTTCTTATGATAAGTTGAGTGTTTCATCAATTTAACCCATTTCCTCAATTATATATACTTGATATTTAATTTTGGA TGTAATTAACATTAGGTATATTCCTGGTCTTGACGAAGGCAAGGCAATGTTTCTCAACTTTGTGAAGTCAGAAATGTCCA CTACTCCTTGTGGCTTACCTATGAGATCTGTGTTGACAAGCTTCTACAAGAGCAAGCAGTTCAAGTGCCGCCCACGTGAG CCTTGGAATGATTTCACAAGCCCTTACCAAACCCTCATCTGTACTGACATAAACCAAAGCATGCATTGTCAACTTGTAGC AGGTTTGGTCCATCGACACCAGGTCCTAAGGCTTGGTGCTTCCTTTGCTTCTGCATTTCTCAGAGCCATTTCCTTCCTTG AACGTAACTGGATGAGCCTCTGTGAGGACATACGTAGTGGTCAGCTAAGTTCCTTCATAACAGACCTAGGTTGCCGCTCT AGCATGTCCGCAATGCTTTCATCCCCTAACCCACGTCTTGCAGATGAGATAACTAAAATTTGCAGCCAAAAGTGTTGGAA GGGAATTCTGTGTCAGCTTTGGCCTAAGGCCAAGTACATAGAGGCAGTGATCACTGGTTCCATGGCTCAATATGTTCCTG CTCTGCAGTATTATAGTGATGGGAAATTGCCTTTGGTTTGTACTAGGTATGCTTCGTCTGAGTGTTACTTTGGGGTCAAC ATAAAACCTTTGAGTGACCCTGCAGATGTTGCTTTTACATTAGTGCCTAACATGGGTTACTTTGAGTTCCTTCCTCTTGG AGATAACGGGACACTATTGATAGACTTTGAGGAGGTGCATGTCCCCAATGACAAGCTCGTGGATTTAGGGAATGTCAAGC TTGGTTGCTTTTATGAGATTGTCGTCACCACCTTTGCTGGTAAGTTTTAAATTAGTAGACTTCAGTTGCTATCATATCTA ATCAAGTTTTGCTAAATCTTTACAAAATTTTGATATTCTACATGCAACTACTATCTTGGATGCCTAACATTTTCCAAGAT TGTACATGTGTAAATGCATATATAAGAAGCTTATAATTACATTCATAATTTAATTTTGCTGAAATAATAGGACTTAAAGC TGTTTAAACTTTAAAGGACTTTTAGGCAAACTATTCATTGGCATATATGTGTATCAGAATTCTCTAGTAACATTTGCAAT CAAATTTTTGATATATCTTTGCAGCAATTCAATCATTGCATAGCCATCAGTCTATTTAATGTGGGTTGTATTGGGTTTTA AAGTTCCAATAGCATAGACCATTTAGAGCTTGTTTGGATACATAATTTATTGGAAGTTATCTACTAAAAATTGCACTGAT TTAAGTTTCAATAAGTACTATATACTTGGTTTGAAGGTTTGCATTCAAACAAGTTTTTTTTAGATAAGCCAAAATTTTAT TAAAAACACAAGAAGTGCCCAGGAAAAACAGAGTACAATTTCAAAGCACCAAGAAACAGGAACAAAGTATAGAAACAGAG CAAGGGGGGAAGGAAAATCAAAAGGGAAAAGCCCACCTAAATACACCAAACGAGTACTTATTATAACAATGATATCTGTA TATAAGTAATTCATTTTTTCTCTCTCCTTTACAATATTGTGATCTCGATGTTTAGGGCTATACAGATACCGTGTTGGTGA TGTACTTCAAGTGGTTGGATTTTACAACAAAGCTCCACAATTTCGATTCATCTGTAGGAAAAATGTTGTGATCAGCATTG ACAGTGACAAGACCAGTGAAGAGGATTTGCACAAGAGCGTTACTGTGGCTAAGAAGTTGTTAGAGCCTTATGATACTCTC CTAGTGGAATACACCAGTTACCCTGATGCTTCTTCAGTACCCGGACACTATGTACTGTACTGGGAAATTCTGCATTATGA TTCAAAGATGGAGTTAGGGGCTCCACTTGATACAAATGTTCTTGAGGAATGTTGCATTGTGGTTGAAGAGCAACTGGACT ACATATACAGGCTTTTGCGCACTGACGGGTCAATAGGACCACTTGAGATACGCGTGGTGGAGGCAGGTACATTTGATGCA TTGATGGACTTGTTCATTAGCCAAGGGGCTTCAATCAGTCAATACAAAACACCAAGGTGCATTAAAACTAATAAAGCACT CAACCTGCTCAACTCCAAAGTTGTTGCTTCCTTTTTCAGTCCTAGAGTCCCCGAATGGAAACCTAAGAAGGTGGATTAAT TTGTTTGCTCTTGGTGCCAAAATCATGAGTCTATAAAGTAAGCACTTTTTTATATAAAAAAAGGCTATCAATTTAAGAGG TAAGTGTGATAAGGGAGTCGTGTGTATATGGATTTGGTGTTTTTGTCAAGTTTTTGTTGATTAGCTTCTGCCGTGCGAAT ATCCTTTGATTGAAGGTGTGGGCTTTTCCGTTTTTCCTGTATAGCGGCCGGATTTCATTTGCTCGGGTTCAACATCTTCT CAATTCTCAAGCTTTCCAGTGCTGCTATGGTTATTTGTAGGGGTGGCTTGCTATTGGTTTGGGTTTTTATTTGGTGCTTC TTACTTTTTGGTTTTTGATGGGTTTTTTCTTCCTTGAAGGGTTGTTTCTCAAGCTTTCCTTAAAAGTGTGATAATTTAAT AAAAATTGTGTTGAAGTGTATGTTGGAAATAGTATTTTAATTGCATTTCTCTTATGCCATGTATACGTCCATGATCTAAA CTCTCACTCATATTATTGTAATAATATTTGAGTACCGTGTGTTTACATTA
CDS sequence (LotjaGi3g1v0455100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGGAAAGAAATTGGAGTACAAAGGTGAGGCGGCACTGAAGGAGATAGAGAGGATGACAAAGAATGGTGTTGAAAT TCAGGAAAGCCTTTTGAAACAGATATTAACTCAGAACAGAGAAACAGAGTATTTGAATAAGTACATTAAGAAGGGAGATC TTGTAACAACTGACGTCATAGCAGAGTTCAAGCTTCATGTTCCAGTTATTAGTTATGAAGAGATCTTGCCATATATCCAG AGAATTGCAAATGGGGAAGCCTCTTCTCTCATCACTGCTCAACCAATAACAGAGATGTTATGCAGGTATATTCCTGGTCT TGACGAAGGCAAGGCAATGTTTCTCAACTTTGTGAAGTCAGAAATGTCCACTACTCCTTGTGGCTTACCTATGAGATCTG TGTTGACAAGCTTCTACAAGAGCAAGCAGTTCAAGTGCCGCCCACGTGAGCCTTGGAATGATTTCACAAGCCCTTACCAA ACCCTCATCTGTACTGACATAAACCAAAGCATGCATTGTCAACTTGTAGCAGGTTTGGTCCATCGACACCAGGTCCTAAG GCTTGGTGCTTCCTTTGCTTCTGCATTTCTCAGAGCCATTTCCTTCCTTGAACGTAACTGGATGAGCCTCTGTGAGGACA TACGTAGTGGTCAGCTAAGTTCCTTCATAACAGACCTAGGTTGCCGCTCTAGCATGTCCGCAATGCTTTCATCCCCTAAC CCACGTCTTGCAGATGAGATAACTAAAATTTGCAGCCAAAAGTGTTGGAAGGGAATTCTGTGTCAGCTTTGGCCTAAGGC CAAGTACATAGAGGCAGTGATCACTGGTTCCATGGCTCAATATGTTCCTGCTCTGCAGTATTATAGTGATGGGAAATTGC CTTTGGTTTGTACTAGGTATGCTTCGTCTGAGTGTTACTTTGGGGTCAACATAAAACCTTTGAGTGACCCTGCAGATGTT GCTTTTACATTAGTGCCTAACATGGGTTACTTTGAGTTCCTTCCTCTTGGAGATAACGGGACACTATTGATAGACTTTGA GGAGGTGCATGTCCCCAATGACAAGCTCGTGGATTTAGGGAATGTCAAGCTTGGTTGCTTTTATGAGATTGTCGTCACCA CCTTTGCTGGGCTATACAGATACCGTGTTGGTGATGTACTTCAAGTGGTTGGATTTTACAACAAAGCTCCACAATTTCGA TTCATCTGTAGGAAAAATGTTGTGATCAGCATTGACAGTGACAAGACCAGTGAAGAGGATTTGCACAAGAGCGTTACTGT GGCTAAGAAGTTGTTAGAGCCTTATGATACTCTCCTAGTGGAATACACCAGTTACCCTGATGCTTCTTCAGTACCCGGAC ACTATGTACTGTACTGGGAAATTCTGCATTATGATTCAAAGATGGAGTTAGGGGCTCCACTTGATACAAATGTTCTTGAG GAATGTTGCATTGTGGTTGAAGAGCAACTGGACTACATATACAGGCTTTTGCGCACTGACGGGTCAATAGGACCACTTGA GATACGCGTGGTGGAGGCAGGTACATTTGATGCATTGATGGACTTGTTCATTAGCCAAGGGGCTTCAATCAGTCAATACA AAACACCAAGGTGCATTAAAACTAATAAAGCACTCAACCTGCTCAACTCCAAAGTTGTTGCTTCCTTTTTCAGTCCTAGA GTCCCCGAATGGAAACCTAAGAAGGTGGATTAA
Protein sequence (LotjaGi3g1v0455100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDGKKLEYKGEAALKEIERMTKNGVEIQESLLKQILTQNRETEYLNKYIKKGDLVTTDVIAEFKLHVPVISYEEILPYIQ RIANGEASSLITAQPITEMLCRYIPGLDEGKAMFLNFVKSEMSTTPCGLPMRSVLTSFYKSKQFKCRPREPWNDFTSPYQ TLICTDINQSMHCQLVAGLVHRHQVLRLGASFASAFLRAISFLERNWMSLCEDIRSGQLSSFITDLGCRSSMSAMLSSPN PRLADEITKICSQKCWKGILCQLWPKAKYIEAVITGSMAQYVPALQYYSDGKLPLVCTRYASSECYFGVNIKPLSDPADV AFTLVPNMGYFEFLPLGDNGTLLIDFEEVHVPNDKLVDLGNVKLGCFYEIVVTTFAGLYRYRVGDVLQVVGFYNKAPQFR FICRKNVVISIDSDKTSEEDLHKSVTVAKKLLEPYDTLLVEYTSYPDASSVPGHYVLYWEILHYDSKMELGAPLDTNVLE ECCIVVEEQLDYIYRLLRTDGSIGPLEIRVVEAGTFDALMDLFISQGASISQYKTPRCIKTNKALNLLNSKVVASFFSPR VPEWKPKKVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 101 | 99 | 1.2E-289 | – | |
| PANTHER | 3 | 101 | 99 | 1.2E-289 | ||
| Pfam | 16 | 100 | 85 | 6.9E-19 | ||
| PANTHER | 102 | 565 | 464 | 1.2E-289 | – | |
| PANTHER | 102 | 565 | 464 | 1.2E-289 | ||
| Pfam | 103 | 542 | 440 | 3.4E-146 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0455100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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