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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0458300 |
| Transcript ID | LotjaGi3g1v0458300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Indole-3-acetic acid-amido synthetase GH3.3; TAIR: AT4G03400.1 Auxin-responsive GH3 family protein; Swiss-Prot: sp|Q6I581|GH35_ORYSJ Jasmonic acid-amido synthetase JAR1; TrEMBL-Plants: tr|I1LRZ0|I1LRZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0458300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87259778..87265088) extracted from Lotus japonicus Gifu genome v1.2.
TGTATGGTAGCATTCATCTATGAAAGCTTCTCCAAATATCAGTGGTTTGTATTGTATATAAGCACCAAACCAACGGAAGG ATATTTCTATTTGTGGGGGCTCCTTTGCTTCTTTTCTAGCTGTTTTCTTCTTCTTACTCTCTAATTTTACTTCTAGCTCA ACATTTCCTCATGCCACAGCACCAAGTGACTTTAATGGAACCAGTTCTGAGCTACAACAACAGCAGCAATGGCAATGGAA ACAACATTGAGTATGATATCATTAGCTGGTTTGAATATGTGTCTCAGAACGCAGGTTCTATTCAGAGTCAAATACTGAGC CTTATTCTGAAGCAGAACAATGGTGTGGAATATCTGAAGAAATGGTTGGGGAACTACAACATCCAAGAGATGGAAGCATG TGCATTGGAATCTCTTTTCACTTCTGTGGTTCCTCTTGCCTCACATGCTGATTTTGAGCCATTTATCCAAAGGATTGCAG ATGGCGACACTGCTCCTTTACTCACTCAACAACCCATAACCACTCTTTCCTTAAGGTACCATTTACTTCTTTAGAATCTT CACTTCTCTTCCTTTCTCTTCACCTTTTTGTTTGGGGAAATTAAGATTCATCTAGTACTGAAATTTCTTTACATTGATGG TCATGTTCACTTTGGTAAGAATCACAAAACAGAACATTAGATACAGGCCACAGCTCACATGTGGCTCTCTGCCATATCTT TTTTATTCTCTCAGATTTTATTAGTCACATGTGTATTGTATGCTTAATTCATGGTGCTAGTAGGTTGCTATAAAATGAAC CAGTGAATTCTTTTCTTGAATTTTGATTTATATTATGTAAAAGGGTGTACTCTTTTTCTTTTTAATATGTTTTTTTTTTC TTGGAGGAAAATGTATATTTTTTTCCCATTTTCTTGGATCTCCTGCTATTGTGGGATAAAAAATATTGATATTTTTCTTG TGGTGGTTTTGCAGTTCTGGAACAACTGAGGGAAGGCAGAAATTTGTACCCTTTACCCGCCACAGTGCTCAAACCACTCT TCAAATATTCACTTTAGCATCAGCCTATAGATCAAGGTAATTCAATACTTCATGAGTGAACAATCAATATACTATTTTGA AGTGCTGAACTGTATACATATTTAAAAATCCTTTTACAATTCATTCTGAAACCGGAATCAATTCTGGTTCCGAAAGAAGC TTCTATAGCAGCTCCTGGGTTCCATAATTGATAATGAGGAAAAAGAAGCTAATCCGAACATGCTATTTACAGGGTTTACC CCGTAAGGGAAGGAGGGAAGGTTCTTGAATTCATATACAGCAGCAACACATTCAAAACAAAAGGAGGTTTAACAGTAGGG ACCGCCACAACACACTGCTATGCTAGTGAAGAATTCAGAAATAACAAACAACATAAAAAGCTATATGGTTGCAGCCCTGA AGAAGTAATTTTTGGTGGAGACTACAAGCAATCTACATATTGCCACCTCCTTCTAGGCCTCTTCTTCTCTGACCAAGTTC AGTTCATGACCTCAGCTTTTGTCTACAGCATGGTGCAAGCATTCACCACCTTGGAAGAACTCTGGAAAGAAATATGCAAT GACATCAGAGATGGCACTTTGAGTCCAAGAATCAAATTACCCAAAATGAGAGGGGCTGTTTTGGAAATTATTTCTCCCAA TCCATGTTTGGCTTCAAAATTGGAAGCCATTTGTCATGAGCTAGAAAATGTGGATTGGTTTGGTTTGATTCCTAAATTGT GGCCAAATGTTAAGTACTTGTATTCCATTATGACAGGGTCTATGCAACCATATTTGACAAAGCTTAGGCATTATGCAAAT GGGTTGCCTTTGATTAGTGCTGAATATGGGTCTACTGAGAGCTGGATTGGGGTTAATGTGGATCCTGGTTTGCCTCCTGA GGAGGTGACATTTGCTGTTGTGCCCACATTTTCTTACTTTGAGTTCATACCACTTCAAAGACATAAAGAAGATAGTGGTT CGGTTGGAGAAGATTTCATTGAAGGCAAACCAATTCCACTGTCTCAGATTGAAGTTGGACAACAGTACGAAATAGTCCTC ACAACTTTCACAGGTATTTATCTCTCTCTTTTTGTTTTTCTTGTTAAGAACATTTTAACTATAAAGACATCCAATAGCAT CACATTTTATCTGTATTTCTTTATATTTTCTTTCTTTTTCAATGTGTTCTCTCTATCTTTCTCTATTTTCATCAAAATAT TTGCTTGAATTAGATCCGTACAGGAGCATCTTTTGACTTTTTGTTTGATAACAAATACTAATCCCTAGTACCAATTAGTT GCATTAATTCTTTAAAAAAATAATTGAAAGATTTTTCTTTAAGGAAATAGAAAGTTAATTTTCTGATGTAGCAAAAAAAA AAAAGTTAAGTCATATATAAGTGTTTGTATTTAAATACATTTATCTCCTCAAATATATACTCAATTATGTGGTGCTTTCA CTCACCTAATATTGTGGGGTATAAATAGGCTTGGGACCAAAAAATTGCATTTTGAATTAAAAATGTTTAATTAATAAAAA ATTATATTTGAATGACTAAATTATTGAATAATGCATCTATTGGGAACTAAATGAAGTTTTAGTCTTTATAAAAGCATAAT ATTTTAGACTAATATTATAAATTGGGAACTGTTATTCAGTGCGTTGGAAATCTTAACGAAATGTAAGAATTAGTGTTTAT CTCAAAAACAATATGAAATGGTTAGTTAAAAATTGAAATAAGAGGAAATCTAAAAAATCAAATGGTAATCAACTCACTTC GTATGTTTTGTGAGAATTGAACATCTTTTCATAATATCAATCATTACTTTTATTGTAAAATATATCACAATTGATTATGA TTAGCATACAAATTAGAATTTGTACCTTTGTGTTGAAATTAACTTTATCATTAGAATCAACTATTAAAAATATCTAATTA CTTAAAAATTAATTTTGATAATAAAAACTTAATTTTAAAAGTTTACAAATACATCCAAATGAAATACATTATCATTCTTC TCTTCTTTTCTTTCCTTTCCATTTCCATCATTTCATTTCCACTTAAAAAAGGTGTTGAAATTCCTTTTTCCTTATAACTC ATAATAAGTGGGCAAGCCCGATTGGACCCATTTGTTGTAGACCAAGTAATGCTAAATTTGGCCCAAGAAACTAGCAATAA TGAGCTATCTGTCATATGCAAATTAAATGCAAGCTATAACCCTCTCTCTGTTTTTCGACAATGGGGGGACCTGTCTCTTG CTACCAACTTGTGTTGTGTCAGGCCAAAACACTTGGCTGAACTTATCACACATACATTTAGCAAGTTGGTTGAGAGGATA TAAAGCTCACATGCAGATATGATTCAAATGCATACTATTAATGGCCATCTTAATAATTGATAAGTTAGATCAGATTTTTT CTTAACCCACCACAAACATAGCTGTTTAGGATATCAAATCAGTCTCAAAATTTTCATTTACAAAAAATGATCATGAGAAG TTGATTAATTAAGGAGAATCAAATGTTTTACAATCATTTAGTTGAAATTATTTTGATAGACATTACGTTATTCTTCTAAT TCATTTGAAAACAAGTTTAAAAACCAGTAAAAATAATCAAGTTTATGTTGAAGCATGACACGTGTAAAGTGACCCATAGA CAACCCACGTTTAATGTGTTATGATGAGTCCACTTCACTATTTTCACTTTCAATATTGATGTTATATGGTTTAGTATCAA TATTGCAGACTTTTCTGTCATGATTTGGGCGGCATGTTCCATAATTGTCATTTCAAAATTTCAAACCATGTAACGTGGAC TATATATAATCACACATAAAACACACATTTTAGTCATTTTTTTGTTATACTGAGAATAACCTGAAAATAATTATTCAATC TTGTCTTTTACACACTTATTGGCATTTTATATATACCTTATTTTTTCCAAACTCTCTTTTTACATATCAAGTTTATTATT TCTCCATTTTTTTTCAAGTGAATGTAAACGAAACATTTGCATATATGTTATATAAGTGCAATTAAATGTTAGTATTATTT TGAGATAAAAAGTGAATAGATAGTCTTTTTGAGTTCGAATACTAATCTATCGATAAATCTAAACACAAACCGAGATTTTA TATGATTGGATCGGCACAAAACATTATCACTCAAATAAAAGGAAGCGATCGTTTTAGAAATAAATTATGATAAAAGATCA TTAACACGATAATCAACTACTATTCAAAAAAATTATTTAGTGTCTTTGAAGAATAGCTAAAATAGTAAGAGTTGGAAGAC ATATGAATTAAGGATATAATAGCTCAATGAATCAGTGGTGGATGTAATTTTTTGGTGAACCTGGTAAAAATGAGTACACT TATGAAACTAAATATTTCTTAGTGCACAACTTACAAAGAAAATTTTATTTTGTGAACTTATTTTTTTTTTCTTAGTGCAT AATACAAAAAGTCAATATTCTTTTTTGGTAGATGACAAAGTCAATATTCAATCATACATTAGCTAATCTTTCAAAAATAA TTCAGGACTATACAGGTGCAGATTGGGAGATGTGGTGGAAGTATCCGGGTTCCACCAGGGGACCCCAAAATTGAACTTCA TATGCAGGAGGAAGCTAATTCTGACCGTGAACATAGACAAGAACACAGAGAAGGACCTCCAACTAGTGGTGGAGAAAGGG TGTCAGCTCCTGATGAATAAAGCAAATAAAGCTGAGCTTGTTGATTTCACAAGCTATGCAGACATCACAACCAGACCAGG GCACTATGTAATTTACTGGGAGGTCAAAGGAGAGGTTGAGGACAATGTCCTTGACGCGTGTTGCAAGGAAATGGACATGT CATTTGCTGATCATGGCTACGTGGTGTCCAGAAAGACCAATTCAATTGGCCCCCTTGAGCTTTGCATTGTGGAGAGAGGG ACTTTCAAGAAGATATTGGACAATTTTATAGCGAATGGAGCTGCATTGAACCAGTTCAAAACTCCTAGGTGCACTAACAA TAATGTCCTACTCAAAATTCTTGATGCTTGCACCATCAAGAGGATTTTCAGTAGAGCTTACACCAGTTCAGATTAGCAAT AACATAGAGAACAACGAGTTTTAATTTCCATTATTAAAGAAATTAAGTACACTTAACAAAAAAATATGTGTTGTAATGAA TGTACTTTTTGGGGAACGATATTCGCAAGAGTTTTTTTGAGTTTATTTTATAGCATAAGTACTTGTGCAAGAATTTAGAA AAACTTACATAAACAACTTACAATTAATGAC
CDS sequence (LotjaGi3g1v0458300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCACAGCACCAAGTGACTTTAATGGAACCAGTTCTGAGCTACAACAACAGCAGCAATGGCAATGGAAACAACATTGA GTATGATATCATTAGCTGGTTTGAATATGTGTCTCAGAACGCAGGTTCTATTCAGAGTCAAATACTGAGCCTTATTCTGA AGCAGAACAATGGTGTGGAATATCTGAAGAAATGGTTGGGGAACTACAACATCCAAGAGATGGAAGCATGTGCATTGGAA TCTCTTTTCACTTCTGTGGTTCCTCTTGCCTCACATGCTGATTTTGAGCCATTTATCCAAAGGATTGCAGATGGCGACAC TGCTCCTTTACTCACTCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACAACTGAGGGAAGGCAGAAATTTGTAC CCTTTACCCGCCACAGTGCTCAAACCACTCTTCAAATATTCACTTTAGCATCAGCCTATAGATCAAGGGTTTACCCCGTA AGGGAAGGAGGGAAGGTTCTTGAATTCATATACAGCAGCAACACATTCAAAACAAAAGGAGGTTTAACAGTAGGGACCGC CACAACACACTGCTATGCTAGTGAAGAATTCAGAAATAACAAACAACATAAAAAGCTATATGGTTGCAGCCCTGAAGAAG TAATTTTTGGTGGAGACTACAAGCAATCTACATATTGCCACCTCCTTCTAGGCCTCTTCTTCTCTGACCAAGTTCAGTTC ATGACCTCAGCTTTTGTCTACAGCATGGTGCAAGCATTCACCACCTTGGAAGAACTCTGGAAAGAAATATGCAATGACAT CAGAGATGGCACTTTGAGTCCAAGAATCAAATTACCCAAAATGAGAGGGGCTGTTTTGGAAATTATTTCTCCCAATCCAT GTTTGGCTTCAAAATTGGAAGCCATTTGTCATGAGCTAGAAAATGTGGATTGGTTTGGTTTGATTCCTAAATTGTGGCCA AATGTTAAGTACTTGTATTCCATTATGACAGGGTCTATGCAACCATATTTGACAAAGCTTAGGCATTATGCAAATGGGTT GCCTTTGATTAGTGCTGAATATGGGTCTACTGAGAGCTGGATTGGGGTTAATGTGGATCCTGGTTTGCCTCCTGAGGAGG TGACATTTGCTGTTGTGCCCACATTTTCTTACTTTGAGTTCATACCACTTCAAAGACATAAAGAAGATAGTGGTTCGGTT GGAGAAGATTTCATTGAAGGCAAACCAATTCCACTGTCTCAGATTGAAGTTGGACAACAGTACGAAATAGTCCTCACAAC TTTCACAGGACTATACAGGTGCAGATTGGGAGATGTGGTGGAAGTATCCGGGTTCCACCAGGGGACCCCAAAATTGAACT TCATATGCAGGAGGAAGCTAATTCTGACCGTGAACATAGACAAGAACACAGAGAAGGACCTCCAACTAGTGGTGGAGAAA GGGTGTCAGCTCCTGATGAATAAAGCAAATAAAGCTGAGCTTGTTGATTTCACAAGCTATGCAGACATCACAACCAGACC AGGGCACTATGTAATTTACTGGGAGGTCAAAGGAGAGGTTGAGGACAATGTCCTTGACGCGTGTTGCAAGGAAATGGACA TGTCATTTGCTGATCATGGCTACGTGGTGTCCAGAAAGACCAATTCAATTGGCCCCCTTGAGCTTTGCATTGTGGAGAGA GGGACTTTCAAGAAGATATTGGACAATTTTATAGCGAATGGAGCTGCATTGAACCAGTTCAAAACTCCTAGGTGCACTAA CAATAATGTCCTACTCAAAATTCTTGATGCTTGCACCATCAAGAGGATTTTCAGTAGAGCTTACACCAGTTCAGATTAG
Protein sequence (LotjaGi3g1v0458300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPQHQVTLMEPVLSYNNSSNGNGNNIEYDIISWFEYVSQNAGSIQSQILSLILKQNNGVEYLKKWLGNYNIQEMEACALE SLFTSVVPLASHADFEPFIQRIADGDTAPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLASAYRSRVYPV REGGKVLEFIYSSNTFKTKGGLTVGTATTHCYASEEFRNNKQHKKLYGCSPEEVIFGGDYKQSTYCHLLLGLFFSDQVQF MTSAFVYSMVQAFTTLEELWKEICNDIRDGTLSPRIKLPKMRGAVLEIISPNPCLASKLEAICHELENVDWFGLIPKLWP NVKYLYSIMTGSMQPYLTKLRHYANGLPLISAEYGSTESWIGVNVDPGLPPEEVTFAVVPTFSYFEFIPLQRHKEDSGSV GEDFIEGKPIPLSQIEVGQQYEIVLTTFTGLYRCRLGDVVEVSGFHQGTPKLNFICRRKLILTVNIDKNTEKDLQLVVEK GCQLLMNKANKAELVDFTSYADITTRPGHYVIYWEVKGEVEDNVLDACCKEMDMSFADHGYVVSRKTNSIGPLELCIVER GTFKKILDNFIANGAALNQFKTPRCTNNNVLLKILDACTIKRIFSRAYTSSD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 21 | 608 | 588 | 0.0 | – | |
| PANTHER | 21 | 608 | 588 | 0.0 | ||
| Pfam | 33 | 588 | 556 | 6.3E-179 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0458300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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