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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0463300 |
| Transcript ID | LotjaGi3g1v0463300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxisome biogenesis protein 22; TAIR: AT3G21865.1 peroxin 22; Swiss-Prot: sp|Q9LSX7|PEX22_ARATH Peroxisome biogenesis protein 22; TrEMBL-Plants: tr|I3SAV3|I3SAV3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0463300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87863714..87870711) extracted from Lotus japonicus Gifu genome v1.2.
CTAGCATTAGACAGAACTTATTAAAGTTCAATCTAAGTTTAGGCTTTCATTTCTCTGTTCTGTTTGATTTTGTCAAAATT AGTAGAGCCATAACTCTCTACTTCTTCTTAGTCTTCTATTACTAAATTGACCTTTTTGGCATGATTGGAAAGGACAAATG GGAGTGAAATTAAAACACTGGTGATTACGTGACGCAGCTGCACCATTCTAGCTTGTCCTTGTCCACAGGAATATGTCCAA ATTTTCTATATGTGATTCAAGCTGAAGAGTTCCTATAAAAGCTTCTTATACATGCACTAGCTACCAAGCTACACCATCCA TACGAATCGAAATAACAAAGGCCGAATCTCGGTGAATCGTGTTAGCAAGGTGACCTATACCACTTATTTACTCAAGAAAT TGCTTTATAGAGGTTCTGAAAATGTGTAAAGGTGTAGAAGAAAAAAGGGGTGCTAGAATCTGCAGGAGGGTTCTGTCTGA AGGGGTTTCTTTTTCTTCTTCATTTAGGGCAACAAGAGGTTCAACATCTTGTGAGCTTTGTGGGTTGCAAGCTTCATTGT ATTGCAAAGCTGATGATGCCTAATTATGTGGAAAATGTGACAAATTGGTTCATGAAGCCAATTTCTTAGCTCTTAGACAC ATAAGGTGCTTTTTGTGTAACTCATGTCAGAACCTTACAAGGAGGTATGTTATTGGAGTCTCATTAGAGTTCTTTCTTCC AGCCACGGTAAGCGTAGAGGACCTTCTTAACAACGGCAACAGCAGAAGAAATTGTTCAAGAAAGCAAAATAGTACTCCCT TCTCGTTTCTCTAGTTTCCATCTTAACTTTTTTTTTGTTTTATGAATTTGTTATATCTATAGAGCTTATTGATTCATCAT CTTTGGTTAGAAATGGGGAAGTGCTGAGACTTTTTTAAACAGCAAGGTACTCAGAAAAATAATGTGGCTGCCACAAAGTG ATTCAATGGAAATTAACCAGTGCAATGTTTTAGATTTCATTAAACTAGTGGTTCATGTGTTTATACATACAAATATATAA TCTAAAATGTTATTAACTTATTATACTGTAGTTGTAGTAGCAGATATATAACAAATTTTGATATGTTTAATTCCTCTAGC CACTTCAACCCAGGTCGGTGAAAGTTAAATGTCTCCCTTAGTGCGACTCTTATAATTCGAACTATCAACTTAAAGGTTTA AACAAACATTTTTTATCATTGCGACTGACGCCCATTAAATGGTAAATTATCATCAATTTATAAGTTCGCGCATGACATAT ATTACTATTTTTTAAAAATATATGCTTGCCAAGAATAGCTACTAATGCTCTGTTTATTTAAAATCTTAGTAAAATACTAA AAAATTATGGAAAGTAAAATATTAAACTTGATATTGCAAACTGTTACAAAATTTATTAAATTTTCAATGGAAACTATGAA TTAATAACATAGAGCATCTTTGTGGCGGTTTTGTATTATCAGTATATTTTTTGTTTCACTTATTTTTTTGTCGGACCAAG TAAAACTTACAGAAAACTTATTCAAAGCTATATTTGATAGATAAGTTTCAATTAGTGTTCTTTAGCTCGTATCCAAAGAG ATTATATAATGTCTCATAAACATGATGGCCTATAATGCAGTTAGATAAATAGCTTATTTAAGTGTTTATTACATAAACGT TCATTCATTTATAAACAAATTTGAAAAACTCATTTAAATAAGCTTAAAATTAGTTATGTATAAACATAATTTATTCATAT AAGCTAATCTGAACAACTTATGAAAATAAGATTAAATCTATGGCCTACCCAACATCTTGTTAACTGTATCAATGCAACTC AACCGGTAGTCTTGTAAAAAATAATTCATTAGCTTTGGGAAAAAGATCAATTTATAGATTTATAGTTGAAGAGAGGAATG TAATCTTATTTTAAGGTAACACTATTCAAATTATAGATTTTTTGTTTTTCTTAATAACTATGATTGCCTTTAGAATCTTT TTATAAAAAAAAAGCCTTAAAGCGTGTTTGATGCTTTTTTTTTAATTTTTTAATTAGTGTTTTAAACTTTTAATCTTTTA ATCCACTTACCAAAAATCTCAATTACCATTAACTAATTACAACCTAACAAGCATTTATTTAGAATTTTTATTTTAACCTG TGTATAGGTCATCTCATAGGGTGGAATCGTTGAAACTTGAAACCATTGTATTGGAATTTCCAAGCTTGATTGAAAATGGC GATCATGAACGAGCCTCTTTGAGCAGAACAACAAGATCTTGTGCCTCACCTGTGGATTATCCTCCTATGCTCATGGCGGA TTCCTCCAAAGAAGAGTTCTTGCAGCTCATCAAACGCCTCACTCTCAAGATTTCTAACATCATCGTATTCTCTCAATTCC CCTTTATTTCTCTTGATTTGATTCATGCCCCCCTTTCAATTTTCGGTTTTTTTTCTCATTTCTGCTCTCAAAGTTTGTAT CTTTGCCCCTTGTTTCCATGCTAGTACTTGAATTTCTACATTTTGTTTGTTATTTGATTTGAGGTAGAGTAATTCAAAAT AAAAATTAGTTTTTTATTTATTTGTATGCAAAACCCAAGTGAAATTTTGTAGGAATTATGATTAGGGAGACAAAAACAAG TGTGGCATAGGGAAAACAACGGAAAGATGGTACTTTGGTACAGTTAAGTCTTGTCAAATTTGCATTGTGTTTATTGTTAG GCTTGTCCTTTGGGAATGACTGTTAGCTAAACTGGTCTCTCTATTCACGTCTGTGATTTTACTGCACCATCTTTGTATCT TGTATCATGGGATGTTGGAACTTGGAAGCTGTTAGAGAAGTAAAATAAGACCATTCATGTGGCCCTTACCCAACAACTTA AGCTTTTGGCATAATTGGTTGTTTGATATGGTATCAGAGCCTATACTAGATCCATTTGTTGTGGAGACCTCCTATATTTG CCTCCAATAACTAGTGTAGGACTTTTAGATATGTTTCGTTGCCTCTATGAGTTGTATAATTTTTTCATTGGCGGATATAT GATCCATGAATGCTGCATTTTTTAAAAAACTTTAAGCTAATTAAACACACACAAACACATTTGGTTTAGTGGTTGTCTCA TCTTTGTTTGGATGAGTGTGATTTGAAGCTTACTGTCTTTGGATTGATGACTTTTGGGATGCTCATTATGCTCAACTTGG TGTTAGGATTCACACTCTATTGGGGCTGTTGCGGGTCTTGCCATTGCGATTTTTTTCACCTGGAGGCTGTTGAGATCACC TGGTGAACCTCAACCGAGGCAAAGAAAACGGCAAACGACTACTTCTAGTAATCCTGGAGTCAGTACACATTCAAATGCCT CTGTAGTTCCTTCCGGAGTTCGTTCCCCCTCGGGCGATTCAAGGGCACAGAATGTAGTTGATGAGCTGTTTCAGCCAGTC AAGGTGAATGCTCTTGTCTTGTGTTAAGTTTGATTTCTTTGTGTATGTTTGGCAATTATCATCTTTCTTCTTCCTAATTT TCAGCCAACCTTGGGCCAAATTGTTAGGCAGAAGTTAAATGAAGGAAGAAAGGTAACTAAACTTATTCTCTTACTTTAAA TATTATATTTTGCATATATTGGCTCTCAATTTTATTTTTCTCTTGTCATTGCTAGAGATGATTTTTATCCACATTTTTAC TTGTTCCCTGCTTTTTCTCTCTAGTAATATTTCTTATCTTACCCAAAAAAACGGACCTACTATGGTATTCTGTTTTCATT ATTTTCTAAAAGACATTTCTTTATATGAACTAATTTAAAATCACATGATTATTAATCTGCTATTATACACTTGAAGATTT TCTTTACAAGATTCTATAACAAATGAGTATTTAGACGAAACATGTAAATTAAATTTATTGTTGTTTTGTTGATTGACTTT AGGCCCATCTCTGGCCAATTATTATAATTGTCACTGAATAGCAAATACTTGAACTTGCCTTTTTGTGATGTCCAATCTAT GAGATATCATTTTCTTGAACATTTTATAAAACAAGTAAGAGTGAAATAAGAAATCCAAATAATGTTATGAGTGTTAACCA TAGCAATATGTCCGAAGGTATGTTCTTGTATTAATAATCACTTGATTTTCAGAGACCGAGTACAGGAAGAAGAAAAAAAA GAGAGAGAACTTTTTTTCATTTCCAACTTGTGTTATACCTCAATATGATACTATCATTCTATCTTGCATCGCAAGTATAA GACAAATTACCTACCTGATTTACCATAGGACATAGGTACTTGATGAACTATAATTGTACAAGTTTGAGTTGTTAGACATT GGTATTATTGACAATTTTTATGCTATGTTCTGTATTACTTGTATGTAGGTAACTTGTCGTCTTCTTGGAGTGATCCTTGA GGAAACTAGTCCAGAGGAGCTTCAGGTTGTGAGACTGGCCCTTTTTGTAATTTTTGTTTTAAGACATGAATGTGGGCAAA GTTATCAATGTGGTTCATTCTGTTTTTGGCAGAAACAAGTGACTGTGAAATCCACTGTGCTTGAAGTATTATTGGAAATA ACAAAATTTTGCGATTTATATCTCATGGAACGAGTTCTGGATGATGAAAGCGAGGTGTGTCATTTTATCTTCGAAGTTCC AATGTCATTTTCCCATCATATCTTAACTCTTAGCCATCAAATTGGAATTGGTGAACAACATTTCACATTATATGCAGCTT ATTTTTACCATCTTCCAACTTAGTTGATAAAAAACCTTTTTTATGACCAAAATTTCTGTAAAAATGAACTAAGATATTGT AAAGCTGCTTGAGGTGAAAACCGGTATGTTCACCATTTTTAATATCACAGGGGGAATATGAAATATCAATAGGACTTTCG TATATGTTTTAGTCTTATCTTTGATTTTGACCAGCTTATCCACAAGCCATGCAACATATATACAAGCTTAATATATATTG GAATTAATAATTTCATTTGGAACTTGTTGAATGTTGAGAATGTACATTTCTTGCAGTTTTTAATAATTATTAAAATTGCT TGCAAGCCTCCCTGTCGATGCTCTATTGTTATACATACATATTAGTTATTTTTTGTTTCATGTATCCTTATTGCTGCAGA AAAGAGTTCTTGTAGCATTAGAAGATGCTGGGGTATTTACTTCTGGTGGTTTGGTCAAGGACAAGGTATGTGAATGTGCT CTAGAAATTCACTCTTTCATTCTTTGTAAAACTTGGCTATCTTCATGCTGTCGCATGGATGGGCACTTTGTCTACAACAG GGACATTGCTCTGTGCAGGAGTAGGATACATATTGTTGAGCAGCATAATAATATGTACTTGATCATATTAAAAAAATGTA TGAATTTTAGTTCCGAGTTCTGACAGTGAACACCATTTATTGAAACCATTTTTTGCATTCAGACTCAGTAAGTACGTGTA GTCTAGAGATAGAACTTTGCGTATTATTCTTGCCCAAAAGCATTATCGTACATAACGGGATGACCCAACATAAATATAAT GTTGAATACCGGTCTAGAAAACAAATGGTCACAATGACCTCTCTTTTTTTCTGTTGGAAAAACTTTTAGTGGCCATTTGC TGTGTCTTTTTTAGAGAAGTCCTTGAAACCTGAAATTCTGTAGTAATTGGTCCCATCGGTTATTACTTTATCCTTGTCAC GTGTAAACTTGTAACTATTTATCTGTGGTTCAACAAACAAGAAAAAGGATTGGAGAAAGGTTGCAAAATCACAGGTCACA ATGTGTACTCACTAGATTCTGGTTTGTTGCACTTATTTCTGCCTTCTGTGTAGTATGAATTTTGCAAAATTGCCAATATG AAATATCAGTTTATGAAGGGGTAGCTGATTACTTTTTCTTCTACATTTTTATCTGGTATATATGCAGGTCCTCTTCTGTA GCACAGAGATTGGGCGATCTTCATTTGTTCGGCAATTGGAACCAGACTGGCATATCGACTCAAATCCTGAAATTATCTCT CAGTTAGCTGTATGTTACTACATTATATCAACTTTACCCAGCATTTGTCAACCTTGCTCAACATTATACAATCTAATGAT TAACACTTATTGTGTTGCAGAGATTTATCAAATACCAACTTCATGTCTCTCCTTTTAGAACGGAACGAACTGCTGCTAAC GTATTCAGTGCTCCGTCCCTGGAACAGTTCTTTGGATCCACATGAAATTTAGACAATTGAAAAAGGGATGTTATTCATAA ATTTATACTAGTTTGTTTCTGTTTGCATTTTGGATTCCACCATTACCATACTTTTTCCCCAATTTGTCTAGATTTTTAAG AACTAGGTTAGATTTTCTAGTTTAATGGGCAGGTGAAAGACCTGCTGTGTATCTGTGTAATGAAAATTTCTCTTATTTTT TCTTTTGGCTTGGGGTTTGAAATTTGTGCATTGGAGGGTATCACATCCTTAGTTTTAGACTGTCAAGATGTCATTTTCTT TAGATGTTTGTATTTTTTCATAGTTACTTGATTTGCCGTCATGGACAATCTTTGGACCTTGTAATTGATCTTTCAGGTTG TAGACTTGTGGCCCTTTTCCTATTGGCACCGAAAATTAATTTTCAGTATTTTTTTAACATCTGGAAGGTTATTCTAATCT GGATGGGGTTAATACAAAAATGGGTGGTGCTAAAAGTAATCTCCACACTTAAGTGAAAGGCATGTCTATCCCTCCCTATA CCTCTAAGAATCATCTACCTTAAGTTAAATCTTTTGTATATATATATTTTTTTAATTTAAGGCGTATATTATTTAGGCTT ATTTTCTGATGTAACAAAAAAAATATTATTTAGGCTTAAAAGTATTTCATGCCCCTGATGTATCAAGCTTGTGCAAATGT CGTTCCTACTCTATTTTTGTCTATGTTTGTACCCTCCATGTTTCTAAAAAGTGCAACGAATGCCCCTCCGTGACGTTAAA AAATGGGTGATGTGGCCACGTCAGCATCCTACTTGGCG
CDS sequence (LotjaGi3g1v0463300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCATGGCGGATTCCTCCAAAGAAGAGTTCTTGCAGCTCATCAAACGCCTCACTCTCAAGATTTCTAACATCATCGA TTCACACTCTATTGGGGCTGTTGCGGGTCTTGCCATTGCGATTTTTTTCACCTGGAGGCTGTTGAGATCACCTGGTGAAC CTCAACCGAGGCAAAGAAAACGGCAAACGACTACTTCTAGTAATCCTGGAGTCAGTACACATTCAAATGCCTCTGTAGTT CCTTCCGGAGTTCGTTCCCCCTCGGGCGATTCAAGGGCACAGAATGTAGTTGATGAGCTGTTTCAGCCAGTCAAGCCAAC CTTGGGCCAAATTGTTAGGCAGAAGTTAAATGAAGGAAGAAAGGTAACTTGTCGTCTTCTTGGAGTGATCCTTGAGGAAA CTAGTCCAGAGGAGCTTCAGAAACAAGTGACTGTGAAATCCACTGTGCTTGAAGTATTATTGGAAATAACAAAATTTTGC GATTTATATCTCATGGAACGAGTTCTGGATGATGAAAGCGAGAAAAGAGTTCTTGTAGCATTAGAAGATGCTGGGGTATT TACTTCTGGTGGTTTGGTCAAGGACAAGGTCCTCTTCTGTAGCACAGAGATTGGGCGATCTTCATTTGTTCGGCAATTGG AACCAGACTGGCATATCGACTCAAATCCTGAAATTATCTCTCAGTTAGCTAGATTTATCAAATACCAACTTCATGTCTCT CCTTTTAGAACGGAACGAACTGCTGCTAACGTATTCAGTGCTCCGTCCCTGGAACAGTTCTTTGGATCCACATGA
Protein sequence (LotjaGi3g1v0463300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLMADSSKEEFLQLIKRLTLKISNIIDSHSIGAVAGLAIAIFFTWRLLRSPGEPQPRQRKRQTTTSSNPGVSTHSNASVV PSGVRSPSGDSRAQNVVDELFQPVKPTLGQIVRQKLNEGRKVTCRLLGVILEETSPEELQKQVTVKSTVLEVLLEITKFC DLYLMERVLDDESEKRVLVALEDAGVFTSGGLVKDKVLFCSTEIGRSSFVRQLEPDWHIDSNPEIISQLARFIKYQLHVS PFRTERTAANVFSAPSLEQFFGST
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | - | – | |
| PANTHER | 4 | 263 | 260 | 2.2E-134 | – | |
| PANTHER | 4 | 263 | 260 | 2.2E-134 | ||
| Phobius | 30 | 48 | 19 | - | – | |
| Phobius | 49 | 264 | 216 | - | – | |
| MobiDBLite | 52 | 91 | 40 | - | – | |
| MobiDBLite | 57 | 91 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Peroxisome organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules. |
Expression pattern of LotjaGi3g1v0463300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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