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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0467900 |
| Transcript ID | LotjaGi3g1v0467900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B-cell receptor-associated 31-like protein; TAIR: AT5G42570.1 B-cell receptor-associated 31-like protein; Swiss-Prot: sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31; TrEMBL-Plants: tr|A0A0B2QM05|A0A0B2QM05_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0467900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88354125..88358992) extracted from Lotus japonicus Gifu genome v1.2.
AAACATTCTACATTTGACCAGCACAGCACAACATAAACCCTGTCTCAACCGACACGCTTCTTCACCTTCTTCTTCTTCTT CTTCTTCTTCTCACTTGTCATTCTCTCCTTCGTTCTGCCATTGATAACAAACTCGATTGTAGTCATCATCATCATCATCA TCATTAGAAGAAGATGTTGCAGCTACTCTACACTGCGATTTTCAGCGAAATGCTTCTGATTCTGACCCTCGTTTTCAAAA CCCCACTCAGGAAGCTTGTCATCGTTTCCTTGGATCGTGTCAAGCGAGGTCGTGGCCCTATCGTCGTCACCACTGTGGGT GTCACGTTGATTATCGTGCTTGCTTCCAGTCTCTATAGCATGGCGAAGATCCAAGAACGTACCATCGAGGCCGGTGTACT CAACCCCACCGATCAAGTCCTCTTTTCCAAGCACTTGCTCGAAGCCTCTCTAATGGGTACCTTTCAATTTTCCTCCTTGA GCTCGTTTGATGGTTCAAAATGTTTACTTTTTGTTTGAAATTACCTGGGTTTGCTGTTGGTTTGGGTTGATTCAGTGATT TAATTACTTTTTTTTGAGTGATTTAATTACTTGAATTTTATGTAGTTATTTTATGGTAATTGTAAAAAAAGGGAAATTCT AGGATGGACTCATTAGTAGACAAAGTGTGATAATATAAGCTAGGTTTGAGTTGTGTGATCAAGTAATTTTGTGCTTTGTG TGGTCACAGAAGCAGATGAGTTGAGAAAGATGAGGTGTTTTTATGTATAACTAGTCAATAATTCAATTTAGATTTCCTTT TATATGTTGGAATTATACCATGTTTTCTTCGATGGTGTTAGCTTGTTAGGTGTTCACTTCCTTGGTATCTGATTTATCAA TTACATCTAATGATTCAATGATTGGTTTTTTGTTTCAAAATTTCCAATCATGGGTGGGGATGATTGAGTATGTATGTGAG ACTTGAGCTGCTGCTTCTGAAATGGTCATCAGTGGTAATCTTGCCCCGTATAATTGATTTCGTACAATTTAAGAACATAA CTGCTATATGGAATGAATGAGTCAGTTCACGCGTGAATCTTACGAATACTAACATGGCTTTTTGTTAAAAGTGTGTAAAA AATTCGTAAAATGGTTGATTGTGTGAATAATAAATTTGTAACCAATCAAAATAAGGTAATACAGGGGCCGTGTGAAGCAT TTTCCTTTTAAGAATGGTTGAGTTGAGGTAAGTAACATCTTTGTCTACCGCTTTTTGATTAATCCTTCATGATTCATGTG ATCACACGGTAGATGTATATGGTTATAGAGACCTTCCAATAACTGTTTGGTTGGAGGGGAGGGGATTGAAGGGATTTTCA TGAAAACATTGTGTTTGATTCAGAAGTTTGAAGGTGAAGGAGGGAAAAAGAGGGGGTAAAATCCCCTCACCTACAATTTT CGCCTCTCTTCCATAGTTGAGGGGATTTGTAAGGGTTAACGATGACTCATATTTTGCAGATTGTGCTGATTAAATTATCC TATGTTTTCTTTTCTAAATTTCAATTGGCTTTTCATGTGTCAACATGTAATCCCTATTCCCTAGCAGTCTCTACTGCCCA CCAATATGCAGGACTCAGTTCTAGCCATATCAGTTAATGTGGTTTTGTGGCCAAACACAATTCAGGCCATAGGATGGCGT CTTATACTTGGATACCACTCTTTCCATGGTAGGCTTGGTGCCCAAAAATAGAGCAGATGGGTGACACAAAGTTTACCTGT TTTAAACCCTAAACTCCGTTTTACATCCAAGCTACTCTGCACACTCTGCCGTCTTTCACTCGCACCTCTCTCTGCCATCT CTCTCTTGTACATCCCTCTTCCTCCTATTCTGTTCTGCATTTCTCTTTCTATTGCTTTGTCTATCTCTATTTCTTTCTCT CATTTTCTCTGTTTTGTTAATTTGGTATTTACTATGTCCCTGTCATGTGAACACTAAACAAAATTTTATCACTGTCCTGT TTTTTCCTCTTTGTTTTGAATTTCTATTTTATGACTCTCTCCTTTTTCTTTAGTTGTTCTCCTTTATTTTTTATTTTCCT TTATTATTTATTCTACAGTTTATACTTTTTAAGCATACTTTATATATGTTAGATTTTGTTATAGCTGCCATGCTTCCACT ATAGACCACAATGCCATATTTTCATGGGGATTTTGGCTTACACGTGAACCACTATGTACCATTAATACAATTGTTTTCCT CCCCTGCCCATCAGCCAAATAATAACGCTCCTCCCCTTCCCCGTTTGACCCTAATAGTTTGTAAATCTATTGAATTGTTG ATTATTTAAAGTTAAGTAGTGGAAACAGTGATGGGTTGTTGAGTATCACTTCTTCATTTCTAATATCGATATGATTTGAT TGATTGCTCACACCCTTTTAGATTATAATGTTTCAAATTTCATGAGTGTCTTGCTTGCCACATGGTTTAGTTGCCCATCT TATTTATTTCCCAATAATTATTGGAAACTATAAATCTGAATAATGAATTGTTGGTGACTGGGTAATCTGGAGCTTTGTGA TACAACTCATAAAGTACTTTTATTTGCTTCAATACTATGATATGAGTGACCACCATTATTTTTTGGTAGACGATATATGA GATTATTTCATCATGACAATGACTAAGTGCTTGATTGGCATTATGTTATGGCTTCTCTTTAGAGTTTTCCCTGGGCTTCA TCTACCACTAGTCATTGGGCTATCTTCCATATGGTTATTTCTTCTTATTGGGACTTCTATTGATCCTCTCATGACAATGG CATTCTACCGTCTTTCCCTCAATTGGTAGTACCCCTACTTTCTTTCTGATACATTCATTGCTGATCTCGTTTTTCTTATG TCAATTCATCAATCACAATATTTTCATCTCTGCTACACTAGTTTAGGTTCTTGCTAGCACTTCATCACTCAACATTGAAT ACCAGAAAGCATCAGCACATCAGCAGTCTCAGTTATGGTCTGGCAAAATTTTCCTCAGAGGCGCCTTTCAATCTCAAATA ATATATGAAGTATTTTATTCAATGCATCCGCATCACTTGTATCCTATGATTCACATCTTTCGATTTCTCCACCACCATGT AGTATAGATCTAAGCTTGGTGTAAATACTTGATTATTTTTATTTTCTTCCCAGTCCTTGAAACTATTTGTGATACCGTGC ACTGCAGTGTTTTATGCATCTGCTCTCTTCAGTAAGTTCAGTTTAGCAGATCGAATGTGCAGTTGCCTTGTGTGGAATTG AAAGTTTGTTTTTATAGTTGTTGTTTTACTGGGTTGTTTTTGGTAAACTCACATTGCTTGCTTTTGACAGCGTAGAATTC TGTCATGTGGGTTTTTTATTTCGATTTGTGTTTTCTTCTTTCACATTGCACATTTTTTTCCTGCTACTTTTATATTTCTT CCTGTTAAGGTTTCTGATTCCAAGATTGCCCTTAATGCAGGTGTTTTTCGTTTCTCTTCCCTCTTTTTTCGTTGGGGATA TTTTAGTTCTCATGAGTGTTGTTAGATGGATATTTCTACTGTAGTTTTTTATATTTCATTTTTACTCATTCTTATATATG TTTTAGTTCTTGAATTTGATTCTTATCATATAATGTGTGCAGGTTTTGTGCTGTTCCTCTCTCTGATGATTGATAGATTG CACCATTACATAAGAGAGCTTCGCTTGCTCAGGAAGACCATGGAAGCTGTTAAGAAACAAAGCAGGAGTTTTGATGATGA TAAAAATGGCAATGCAGAGGAGCATAAGGCATTGGCAGAAGAAATCATGGCATTGAAGTCTAAAGTTAAGAAACTGGAAT CTGAATGTGAGGTGAAAGGTAATAAGGCTAAGACTTTGGAAACTGAAGTAGAGGCTCTTAAGAAGCAGTCTGAGGGGTTC CTTATGGAATATGATCGCCTCTTGGAAGACAATCAGAATCTCCGGAATCAATTGAACACCATTGACCATAGCACTTTGAA TCTTGATAACAAAAAGAGCATGTGAAGGTTTATGTTTCTGGAAAAACAATTTTCTCTTTGTTTCAACTGCTGTTTGAGAT TTACATGTTTTCTTAATAGGTTGCAGTTGTAAATTTGAAGTATCTAAAAGCAGAGATGAGCTATGTGGATTTAGTGAACT TACTGTACTTTAAAGCACCTCAGATATTGTTGACAATGTTAAGTAATATAGGAATGGATAGTTATTCCCTCAGGTTGATT TCTTGGAATTTTATATTTGTAGTTTGCATGCCTCTATGCATCACTTGGTGAACTTAGAAAACTCGGAGGCTTGGAATTAT TAGAATTCCCTCATGTCGCATGACATTGACATGTGGAAGTTTGTGTTTATTTCTCTTTATAAATATAAACAGGTCTCAAA GATAAAGATAGACATAAAACTTCAACATGATCACATTATGTAAAACTTCAACTATGAGTGGATCCATGTGAATTAAGGTT GACATACAATATGGATATACAATCAATGCTCAAGTGAATACATGTAAGTGGGGTGTTGCCTTTATAGCCATTATGGACCA AATGGTATATGTGCTAAGATAGATAGAAAAATCTACCTTGCAACTATTTTAAGTTTGAGTAGTTTTCTTCTGCTTTCAAC CACAGATTTAGGCAATGCAGCAGTGCTTTTGATTCATTTACACCTAACTTTTTTTTACCATTTCCACTCATTTTCGCTTC CAAGGTTTCTATTCTTCTCATATCACATCTTTCATCATATTTCTTATTTTTCTCTCTTCTCTCTCTCTTTCTAGGTGTGG GTGGAAATGTGGTGTCAATAAAATCACTCATATATATCTATAATGTCTTGTTTCATTGTTATTTTAAT
CDS sequence (LotjaGi3g1v0467900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCAGCTACTCTACACTGCGATTTTCAGCGAAATGCTTCTGATTCTGACCCTCGTTTTCAAAACCCCACTCAGGAA GCTTGTCATCGTTTCCTTGGATCGTGTCAAGCGAGGTCGTGGCCCTATCGTCGTCACCACTGTGGGTGTCACGTTGATTA TCGTGCTTGCTTCCAGTCTCTATAGCATGGCGAAGATCCAAGAACGTACCATCGAGGCCGGTGTACTCAACCCCACCGAT CAAGTCCTCTTTTCCAAGCACTTGCTCGAAGCCTCTCTAATGGGTTTTGTGCTGTTCCTCTCTCTGATGATTGATAGATT GCACCATTACATAAGAGAGCTTCGCTTGCTCAGGAAGACCATGGAAGCTGTTAAGAAACAAAGCAGGAGTTTTGATGATG ATAAAAATGGCAATGCAGAGGAGCATAAGGCATTGGCAGAAGAAATCATGGCATTGAAGTCTAAAGTTAAGAAACTGGAA TCTGAATGTGAGGTGAAAGGTAATAAGGCTAAGACTTTGGAAACTGAAGTAGAGGCTCTTAAGAAGCAGTCTGAGGGGTT CCTTATGGAATATGATCGCCTCTTGGAAGACAATCAGAATCTCCGGAATCAATTGAACACCATTGACCATAGCACTTTGA ATCTTGATAACAAAAAGAGCATGTGA
Protein sequence (LotjaGi3g1v0467900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQLLYTAIFSEMLLILTLVFKTPLRKLVIVSLDRVKRGRGPIVVTTVGVTLIIVLASSLYSMAKIQERTIEAGVLNPTD QVLFSKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLRKTMEAVKKQSRSFDDDKNGNAEEHKALAEEIMALKSKVKKLE SECEVKGNKAKTLETEVEALKKQSEGFLMEYDRLLEDNQNLRNQLNTIDHSTLNLDNKKSM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 212 | 212 | 5.8E-110 | ||
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 1 | 212 | 212 | 5.8E-110 | – | |
| Pfam | 3 | 123 | 121 | 3.9E-5 | ||
| TMHMM | 4 | 21 | 18 | - | – | |
| Phobius | 6 | 22 | 17 | - | – | |
| Phobius | 23 | 42 | 20 | - | – | |
| TMHMM | 42 | 64 | 23 | - | – | |
| Phobius | 43 | 64 | 22 | - | – | |
| Phobius | 65 | 83 | 19 | - | – | |
| Phobius | 84 | 104 | 21 | - | – | |
| TMHMM | 88 | 110 | 23 | - | – | |
| Phobius | 105 | 221 | 117 | - | – | |
| Coils | 107 | 127 | 21 | - | – | |
| Gene3D | 138 | 201 | 64 | 2.6E-6 | – | |
| Coils | 142 | 211 | 70 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi3g1v0467900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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