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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0468700 |
| Transcript ID | LotjaGi3g1v0468700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-hydrolase; TAIR: AT2G32520.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q7DFU6|YGHX_ECOLI Putative uncharacterized protein YghX; TrEMBL-Plants: tr|I3SMB6|I3SMB6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0468700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88436841..88440213) extracted from Lotus japonicus Gifu genome v1.2.
GCGTGTATACATCAACATAAACCCAAAAATAATTAAACGCTCAAGTGAGAGAGTGAGGAATGTTGAGAGTTGTGAGATCA TCCGTTCCCAGATTCTTCACCACAACCCCTCTTCCCACCTTTTCACCCTTTGCTTCTTCTCGTTTCTCAGTTCGTTCCAT CGCTGATTCTGCTGCTCCTTTCCAGAAAATCCAGATTCAAAGGGAAGACACTGTGAGTTTCCCTCTTTGCCACAACCCCT TTTCATACCTTTTCTGATTCCCCATTTCCAGAACTTGTTTTTTTAGCATCAATGTGTTAGTTAAACGTTATCTTGATCCT TTCTGTCTGGAAAAAGTGAATTAGATTATTGAACTTACAATGATCATGAGAGTCAGTGGGGTTTCATAGCTAATTTTTTT ATGTTTTCAATGATTAGACATTTGATGCATATGTTGTTGGCAAGCACGATGCTCCTGGAATTGTTGTGCTTCAGGAGTGG TGGGGTGTGGATTATTAAATCAAAAATCATGCTGTCATGATTTCTCAGCTTGGTCGTGGATTTAAGGCTCTTATTCCAGA GTAGGATTTTTAGTATTTGCTCTTTTTTGTATCATGTAGTGTTGTCATATTATTATGTATTTGGATCACTGATGGGTTTT TACCATTTTCACCAGTCTGTACAGAGGAAAGGTTGGTCTAGATGTTGCCGAAGCGCAGCATTTGTTTGATGGTCTTGATT GGCAAGGTGCGGTGAAGGATGTCCGCGCTTCAGTTGACTGGCTTAAAACAAATGGTTCGAGGAAGGTTTGTCTCTTTTCA TGTGTTGTCAAGATGAAAAATTGATTGTTTTTCAAAATTTCCTGTCACCTACTTCATCCTGGTTAATTTGTATACCTGTG TCTCAAGAGTCATTTTGTTTTTATCATCATTCCACGGCTGCAGAAGATTCTTCTGAGTGCCAGTTTGGTACACCTTATTA GGCATGGCGATATGTTAGGATAGTAATTAGTAAGTCGTTGGTTGAACAAAAATGTGAGTTGATCTTTCATTGTAACAGGC TGGTGTAACTGGCTTTTGTATGGGGGGTGCTCTCGCTATTGCCAGCTCTGTCTTGGTTCCAGATGTTGATGCTGCTGTAG CTTTCTATGGTTTTCCTTCGTCTGAGCTTGCAGACCCTGCCCAAGCCAAGGCTCCTGTTCAGGCTCACTTTGGAGAGCTG GATGATTTTGTTGGCTTTTCGGATGTTACGGTATGAGAATATGTTTGCAACACACATTGCGGGTCATTTTTGTCCCTTAC TTGAATTCCCTTTGGTCAGTTTATTTATATTAGCTTGTACATTATCCAATTCAATATTACTGTTGCAGAGTTTAGTTTAG TCTAGTTTATTTATATTAGCTTGTACATTATCCAATTCAATATAGCTGCCTGCTAGTTCAGTTCCCTTCCAGTTTATTTT AGTGAGGATTGGTACTGAAAATATCTCTTTTTCTAATTCAGAAGGTGTGTTGGGTAAAATAAATAAGCAACTAATGATCG AGGTTTGGGAATGAGAAGTGAAAATTATTAGTTTTCTTGGTAAGAGAATGTGCACAAAGGACTTCAGAGCCTAATGATTG TTTGGCGTCTTAGACTGTAGTAACATTGATTTTAAAGTGGTCAGTATGCGAGTGATCGTGTAAATTAAAATCAATTGAAC CTTAATTGAAGGGATATATTTGGGATTGGAAAGTTATTGGCCCCCTTGTTTAGATAAAGGGCAATGTACACTCAAAGTCA ATTTTTTTTACTACATAAGAAAGTTTTGCTTCTGTGGTTGAAGCATAGAAACACAATAAGTCATCCCAGCGTGATTCCAT AGCAATTTGCTAAACATGTTGGCGTAACCAAATGGCATGAGGTAAAGAACTTAATAGAAGAGGGGTGAAAATGAGAAGTT AATATTCTTGTATGCGTTTTTGGACCTTGATAAGAAATTGAAGAAAACTAATGAAAATGGAGTGACCACTAGACACTAGC TGCATTCTACTTTTTCTTTTTACACATTTGTCCGGCGTTTGCACGCATCTTTCAATATTCTATATTAGTTTCATTTAGAC CAACATTAGTATCACAAACAAAATAAATTTTCAACCATGCAGATCCATCTTCTCTACAACCTTCAGCAACTGAAATTATA CCCTTCTTATCCTTATTATTTCCATTCTTCTTTCTGTACTTTTCATCTTATTATTCACCTTCAATAGCAAGCAAGCATAC GCTAAGCAGAGTGCAGGAAGCTTGAAGCTTTTACAATAATAGTCCAATTTCCCTGAAGAGATATCTTTGAACAGGAAACC TGTGAGCAGGGCCAAGAGTTCCTTCACCCTGTGAACCAATAATTTTTCTTCTTAAGGAAACAAAACCTCAATACTTTTGT GCACAAATATTCATTTCTCCTATGTGTTTCATTAGTTTCGACAACAATGTAAGTTTTTTCTCTTTGCAAAGATGTTTTGC TAGCTTGTTGAAAATAGAATCTCCTTTATAAACACACACACACATAAGCGTACCTGTACATACCTTAATATTTTTTTAAA TGTCTTACTTGTATCCGTGCAATATATCCCAATAGGTTCTAACCTTTCTACCGCTCCTACTCTACTGATGCATATAGGAT GTGAAATACTATAAATTTTGATTCCAGTGCTTTTGATGATAATTAATCTCTTAATTATGTGCAGTTTTATAATATCTGAC TACAGAGAACGCATGTTGATGTTCTGAGCCTAAAATTCTTTGATTCAAGAAACATCATCTCATAACATTGTTTGATGTCT CAGGCTGCGAAGGCCTTGGAGGAGAAATTGAAGGCATCTGGAGTTCCACACGAGGTACACATATATCCCGGCAACAGACA TGCATTTATGAACAGATCTCCAGAAGGAATCAATAGGAGGAAGAGCATGGGAATGCCTGATGAAGATGAAGCTGCAGTTC AGCTCGCCTGGTCTCGCTTCCAGTCATGGATGACACATTACTTGTCTAGTTAGTTAATTTATCACTAGCTGAAGTATGAT ATAATGCTATACTCTATCTTAGGTAGAAAAGTAACATGACTGCTGTAATCTCTAACTAAATGTGTTGCTTCCGTACTTGT GATAAAATTGACTTGGAGGATAATTTAAAAACTCTTCTGGTTTTTCTGTATTAAGAAAATATGGTCTTTGACTGGTGGTG CTATTGTTCATCAATTCCGACCATGATGTTCTTCCTATAACAACAATCAAATTCGTCCATGGAAAGTGTAAGAGTGAGCC TCATCATTTTTTTTTTCATATTGTAAAAACTCCATTTTTGTTTATAAGAATCACATATATAAAATGTTTATCCACTTTAG GTGTTTTTCCCTC
CDS sequence (LotjaGi3g1v0468700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTCTCAGCTTGGTCGTGGATTTAAGGCTCTTATTCCAGATCTGTACAGAGGAAAGGTTGGTCTAGATGTTGCCGA AGCGCAGCATTTGTTTGATGGTCTTGATTGGCAAGGTGCGGTGAAGGATGTCCGCGCTTCAGTTGACTGGCTTAAAACAA ATGGTTCGAGGAAGGCTGGTGTAACTGGCTTTTGTATGGGGGGTGCTCTCGCTATTGCCAGCTCTGTCTTGGTTCCAGAT GTTGATGCTGCTGTAGCTTTCTATGGTTTTCCTTCGTCTGAGCTTGCAGACCCTGCCCAAGCCAAGGCTCCTGTTCAGGC TCACTTTGGAGAGCTGGATGATTTTGTTGGCTTTTCGGATGTTACGGCTGCGAAGGCCTTGGAGGAGAAATTGAAGGCAT CTGGAGTTCCACACGAGGTACACATATATCCCGGCAACAGACATGCATTTATGAACAGATCTCCAGAAGGAATCAATAGG AGGAAGAGCATGGGAATGCCTGATGAAGATGAAGCTGCAGTTCAGCTCGCCTGGTCTCGCTTCCAGTCATGGATGACACA TTACTTGTCTAGTTAG
Protein sequence (LotjaGi3g1v0468700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISQLGRGFKALIPDLYRGKVGLDVAEAQHLFDGLDWQGAVKDVRASVDWLKTNGSRKAGVTGFCMGGALAIASSVLVPD VDAAVAFYGFPSSELADPAQAKAPVQAHFGELDDFVGFSDVTAAKALEEKLKASGVPHEVHIYPGNRHAFMNRSPEGINR RKSMGMPDEDEAAVQLAWSRFQSWMTHYLSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 191 | 191 | 3.6E-128 | – | |
| PANTHER | 1 | 191 | 191 | 3.6E-128 | – | |
| Pfam | 4 | 188 | 185 | 3.0E-48 | ||
| Gene3D | 5 | 189 | 185 | 1.9E-40 | ||
| SUPERFAMILY | 6 | 189 | 184 | 1.03E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0468700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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