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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0469500 |
| Transcript ID | LotjaGi3g1v0469500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acid phosphatase/vanadium-dependent haloperoxidase; TAIR: AT3G21610.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein; Swiss-Prot: sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD; TrEMBL-Plants: tr|I3SIV9|I3SIV9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0469500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88495415..88500212) extracted from Lotus japonicus Gifu genome v1.2.
TTCCACTCGAGTTTTCAGCAAATTGTAGATTTGGTGCATAAAATACCCAAAAGCAGCCAATAAATACATCAATTAGGCCC AATCACCTTATTGGTCAGACTCTGTGCCCATCATTCTCACTTCATTGCGATTGGTGAGAGAGAGAGAGAGAAGAGAGAGA GATTCACCGGAATGAGGAAGTGAAGCTGTTTTCAGTTGCAGTTGTTGTTGTTGTTGTTGTTGCAGTGATTGGTTGGCTTC CATGGACGAAGTTGTAACAATGGCTGATGTTACAGCAAGCACGCGCTCAGCGCCTTCATCTTCCTCTTCCACCCTTCCAT TCAACGCTCCTCTTCTCTCAGCTTTCCTCGCCTTCGCTATCGCTCAGATCCTCAAGATCTTCACCACCTGGTGCGTCGTC CCTCTTCTTCATCTTCCCCAATTTCCTTTTGGTTTTTTAATCGATTCCTCTCATACCCTTTTCTTGAATTGTAGCTCAAT GTATTTTTCTCTCATCAAAATTTGAAATTTCCTCATCAATTAGATCCAAGTGTTAGAAAGGAGTGTGCTTTTTCATCTGG GCTGTTATCAGTTTTACTTTTTAATTTGGTGAACTCAATTATACATATGATAATAGGTGTGGTGATTTAAGCTGTTGCTT GTTTGTAATGTGAAGTGAACTCTGATATTGTTATTAGGATTGAGAATTATACTCTTATTTTCTGACTTCATAGATTGAGC TTGATGAGTGCAATATGTCTTTTGGAATTTTTAAGAACCTAATATTGCATTTTAGACTCTTCTGAACTGATCAATCTTTG CAGTGCATGTCTATGTGTGATGTGTTTTGGGAAATGTTATTATGTGAGCTCATTGTTTCCAAAATCTTTCTCCTAGATAC TCAGGTATAAGGAAAAGAGATGGGATTCCAAGAGGATGCTTGATTCTGGCGGAATGCCTTCATCACATTCTGCAACGGTG TCAGCTCTTGCACTGGCTATAGGTCTCCAAGAAGGAGCAGGGTCGCCGGCTTTTGCTATTGCTGTCGTCTTGTCATGTAT TGTATGTACATCGTTTGTGATCAATTGTGCTTTCCTGATCCCTGGTTGCCTTGATTTGCAGCTTATTTCAGTTTCACGCA TGTTGTGTTCTTTATTAGTTTTGTTAGAGCTGTTATATTTTTACACCCCATTTTATCTTACACTACCCCTACACCCCTCT CAGTAAGAGAAAAAAGGGTGTAAAAGAAACATTAGGATGATTATATTGAATAATTTCCATTTTTTGTTTTGATATGGCTG GAATTATATCATTTATATTGATCTTCTGTTTTTGATCTTAGTAAGTCTCGTAAGTTACCAGTTAGTGGGGTTTGCTCTTA TAAGTTAAGAAGCCATCAATTATTCCATTAATGAGGATCAATATTGAGATTGGATTGGAGGAAAGTTTCATTTATCTGTG ATGTGATCTCTTTTGGCCTCGTGTATGAATGTTCATTTTCTTGTTGTGTAGTGAATTTCTGCTATTCCACTTGGCTTTTT AAAACTTTAAATGATCTAACCCAAATTAGCACATATTCTCCAAACTTGCTCTTTACTAGCTGATCCAGTGCTTCCATCAT TTTCTTCTTGGTGCTCCCATAGATTAAGTATCAGTGTATCACAGACTACAAAGAATCTAGGTTCAAATTAATCCCATATA CTTACTTTATACAGAAGTAGGCTGTAGTAGTGTGTCAAAGAAAGTTTAGGCTTTTTTTTTGTAGAACTACACTCTGGAAG CTGATATAGCATGCTGATTACTATTCTCCTTATTTACTTAAAATCAAATTGAAAAGGAAATCCTTGACTAATGAAACATG ATACCTTATCTTCGTATTATTGTCCGGGTTTAAATGTTGTTCACGTAGGCCTTGAAAGTGTCTTTGTCAGTCTTTTTCTT CTACTTGTGGGTTGACATTCTTGATCTTACTCCCTTTACGCAATGGATCACATGTTTATACTTTGTAGCCCCATTTAGTA GTTCAGCTCTTGACTTTTCAACGGGGTTGTTCTTACTATCATGCAGATATATTGGGCATCCTTGATACATTTTTGAGTCT TTACATGTTTTTGTAGGATCCACTTTTCCCCTTTTAGAGGATATCTTATCCTCTCACTTGTTGCATTGCCTTTTCCTCAT TTCTTTCATTTTTTTCCATTAAGTGAAAAAGTATCTGTGTTTTTACTACAAAGGTGTGGATGATTAATTTTTTGTCAAAC ATTCATAGGTTATGTATGATGCCTCAGGAGTAAGACTTCATGCAGGTCGGCAAGCAGAAGTAAGTTCTCTTGATGGTAGT GTTGTTTTCTTGGTTTACCATGTGCCCTTAATTTTTTATTCATCTTGTTTGGAGACAGCTGATTTAATAAAGGTTTCATA TTTTGCTTCCTGTCATGTGATTTCAATGTTAACTGCAGTTGCTGAATCAAATTGTGTGTGAGCTGCCTCCAGAACATCCT TTGTCTACTGTCAGACCTCTGCGCGATTCACTTGGTCACACTCCACTTCAGGTGCATTGGGCTACTTTCTGTGCTTACTA TTATTACAGTGCTTCCTTTCTATGATTTATAGGTTTAGTTTTTTGAGTATCTAGAGTCACATAACTCAGGATTACTGATC TGTTTGGATTTGCGAAGCATTTTAACATGGGAGTAATAAATTGTAAGAGTAACTGGCCGACCAGAACTGATTATTGTGGA TTTCTGCACATCAAAATAAGAAAAAGGGGTGATAAAGTTATCTTTTATTTTCTTTAATTAATTTTCAAGCAAACTTTGGC ATGGAAATTTATGCCACAAGTTCATCTTGGAATTAGTACTACCCAAATTATGTCCTGTTCGTGTCTATCCTCTTTATTTT ATCTTTTTGTAAACAATTAATCAAATTCAATGATTGTCCAAGGCTCCAAGGGTTCCCCTCTTATTCATCTCATCTGTTAT TATTACCGTGATGCCCTTTCTAATTCCTTAATGTGTATTGTTTTCCTTAAATCCTGGAGTTATATCCTCTTGAATACTGA AGCTTATCAAGTGTACTTCATATAGATTACTAAAAAAATATTCATGCTTTATTGCTCTACATTCTAGACCAAGTGGTGTT CAGCTATTTATTGTTTTTATTTCAACCAATTAGTTGGATATGCTCATGCTGGTTGGTTGGCTGGTATTAAATGATGGCAA AAAGTTAATGAAAGAACGGTAGCTGTTTGGTGCAGCATTCCATTCATTTCAAATTTTCAATGTTCATTTATATGAAATTT GCTCTTGTTGGCGTTACCTCCCAAGATCCAATTGCAAACATAATTCATGTCAAGTAGGTCCTTTGCATCATTGGTCCATT ACTACCCACAAGCATGTGGCACATCAGAGCATGCTCATTGGATCACAGAAACTGTTAACCTCTTTTTATGATGGAGACAT TTAGAGTTCTCTGTTTCTGTATCTTAAATATGTTGACCTTATTTGAAAGAGCTTATTTAAGCTTATCTTATAGCATAAGC ACATATACAAGTGTTTTAGAGAGCTTATTAAAATAACTTATGATCTACCTATAAATTGTTTTGAGTTTATTTTCGTAAGA GTCTCAGATTAGCTTATGAATAAGTGATCATGCTTATTTATAACTTATTTTGAGCTTATTCTGATATGTTTATCAAATTA GTTTATGAATAAGCGCGCTTATATGATAAACGCCTAATTAAGTTGTTTACCCAAAAACACCCATAATGACTATTTATTTT TTACAGGTTGTTGCCGGTGGCTTATTGGGATGCATTATAGCGTTTTTGATGAGGAGCTCCAATTAGAATACCATGTGATG TAGCTGATACAAATTCTTTTACCTTATCACAAACTTCACTGCAGGGCCCAATTGGGATCATCGTGGAAACAGCATAAAAA CTTGCTGTTTTCGCTATCTTGTAAAGTGGTTTGAGGGTTCAACTTAGCCCTGGAAGATCCTGCGTCCTGATTACTGGACA TTCTATCTTCTATTGTGCTCATTTATTCATGGGTCTGTTAAGTTTTAGCTTTAGCTAAATTGGTTGCTGAACACACTATG ATATAGCTAGTCTGTCCATTGTCCAATTGAGAGGCTTCTTGGAGATTGCCTGTCATGTTAAAGTATTTTTAATATCTAAA TTCTGAAAGCTGGTTAGCTAAGACAGTGAATGGAGATGAATGTCTCTCTTGGTTGGGAAAATCGAATTGTTTACACACAA AGCTATGATATATTTCTGTATGATTTTCCTTTATAATTATACTTTTCATTTGTGGACTTATACTATGGTAGCTATAGGAA TCTAAGTAGTGATTAGATTTGAAGTTCAAGGGGTGACATAATTTTAGATCTGCCAAAATAAGAGTTCGATATTGGGTTGG AGGATGTGCCTGTTGCAGTTTTGATTGTGTCTGTCTGGGTCTAAATTCGTGGCTTGCCAATGGACAAGTTAAATGCACTT TCCCAAGTTCATCGTAGCAAGCACTCTTTCTTCCTCGTTTTGCTTCTGCATTATATAGTGTTTGTTGGTTTTCAAAATTA AAGAATTGTTTTTTTCTTATAAAAAAAACCGACTTTAAATAGAAGATAAAGAAAATGGTTGGAAATAAAACATGCTCGGC AGACCTTGAGGATGAGTTGCGTTGTCTAAGGGGCTGTCCTCACTCAAGGGAATTGTGGCTTCGCATGAGAGCTATGCCGT GGCCTCACTTCCAGGTGTCAATGATAAAAGAATGGATTAGGAGACTAGCTCGTAGCAATAACAGCTCCAAATTCATTG
CDS sequence (LotjaGi3g1v0469500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGAAGTTGTAACAATGGCTGATGTTACAGCAAGCACGCGCTCAGCGCCTTCATCTTCCTCTTCCACCCTTCCATT CAACGCTCCTCTTCTCTCAGCTTTCCTCGCCTTCGCTATCGCTCAGATCCTCAAGATCTTCACCACCTGGTATAAGGAAA AGAGATGGGATTCCAAGAGGATGCTTGATTCTGGCGGAATGCCTTCATCACATTCTGCAACGGTGTCAGCTCTTGCACTG GCTATAGGTCTCCAAGAAGGAGCAGGGTCGCCGGCTTTTGCTATTGCTGTCGTCTTGTCATGTATTGTTATGTATGATGC CTCAGGAGTAAGACTTCATGCAGGTCGGCAAGCAGAATTGCTGAATCAAATTGTGTGTGAGCTGCCTCCAGAACATCCTT TGTCTACTGTCAGACCTCTGCGCGATTCACTTGGTCACACTCCACTTCAGGTTGTTGCCGGTGGCTTATTGGGATGCATT ATAGCGTTTTTGATGAGGAGCTCCAATTAG
Protein sequence (LotjaGi3g1v0469500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEVVTMADVTASTRSAPSSSSSTLPFNAPLLSAFLAFAIAQILKIFTTWYKEKRWDSKRMLDSGGMPSSHSATVSALAL AIGLQEGAGSPAFAIAVVLSCIVMYDASGVRLHAGRQAELLNQIVCELPPEHPLSTVRPLRDSLGHTPLQVVAGGLLGCI IAFLMRSSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 169 | 169 | 4.1E-92 | ||
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 1 | 169 | 169 | 4.1E-92 | – | |
| MobiDBLite | 9 | 24 | 16 | - | – | |
| Pfam | 28 | 161 | 134 | 8.9E-48 | ||
| TMHMM | 29 | 51 | 23 | - | – | |
| CDD | 31 | 164 | 134 | 0.00194206 | – | |
| Phobius | 31 | 51 | 21 | - | – | |
| Phobius | 52 | 71 | 20 | - | – | |
| Phobius | 72 | 105 | 34 | - | – | |
| Phobius | 106 | 146 | 41 | - | – | |
| TMHMM | 143 | 165 | 23 | - | – | |
| Phobius | 147 | 165 | 19 | - | – | |
| Phobius | 166 | 169 | 4 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0469500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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