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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0473100 |
| Transcript ID | LotjaGi3g1v0473100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-hydrolase superfamily protein; TAIR: AT2G32520.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q7DFU6|YGHX_ECOLI Putative uncharacterized protein YghX; TrEMBL-Plants: tr|I3S5W0|I3S5W0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0473100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89015606..89020013) extracted from Lotus japonicus Gifu genome v1.2.
CAAGTATGTCCTTTTATGTCATTTTACAATTTCAGCTTGTTTAACAGTTAGTTCTACCAAACACTTTTGTTTCAATCACA TAGCTTTTCAACTAGCTTATCAGCTATCAGCTAGCTTTTCAGCTTTCAGCTAGTTTTTCAACTTTCAGCTAACTTATCAG CTAAACATGTCAAACATAGCCTTAAACTTCCGTATTCAATACGGATAATACGGAACTGGTCCCCCTATCGTACACAAGAA AAAACTTGTGTAAACGTGCACAAGGGTGGGGTGAGCAGGTCACCCGTAATTTTCTAATTTTTATTTAAAAAAAAGCATTT TTCAATTTTCTGAATAATTAAAAAACATTTATTTTTTAAAAAAAAAACTTCTCTCTCATGCACTCACGTACGCTTCCTCA CAGAGTCACAGTTCTGGAACAATTTTCTCAACAAATTTCAATGTTCTCCAAAACTTGGAAAGATCTCCAACAAAATTCTC TCACCTCTCTATGCAACCAGACCTGGAAAAACTTGGCACCAGAGACTAATAGATCCAACAGATCTGGTAAAATACTCACT TCTCCAAGTTGTTGGGCTCGTACGCGGAGATAGAACGTTGAATCCGGAAACCGTCGATTTCGTCAAATCGCAGCAACAAG GTGCATCCATAGCCACGTTTTTCCTGGGTTTGAAGGGAAAGAGAAGTGGGAGGTAGAAGGAGTAATGGGTTTGTTGGGTT GAAAAGCTTCAAGTTTAAATCTTTCTTATTCAATTTGGGTTGGAAAGCTTGAAGTTTTTGTTCTTGGGTTTGCAGGATTT GAAGGAAAAGAGAAGGGAGAAGGTTGGAGTAATGAGTTTGCTGGGTTTGATGAGTGTTGGATATTTGACACGGAGCAGTG ACTTTGAAGCAGCAACGGAGTCACGAGCTGAACCTGCAAGAAAATAAGCTGAGTCGCGAAAATCAATTCGCCGTCCTTGT GGTTTTATCCCGGAATATCCAGAACACCTCCCCAGGATTAAACAGCTTCCTCCGGGTAATCGGGTAACAGAATTGGTGAG AAATAATAATAATATTGTGATTGCTCAAGAACTGGACAAAGGTAGGGAAAGAAGAGCGGAGATGAGAGTGATCAACAATG TAAAATTTATCCTCTATATATAGCCAAAAAAACCGTTAATTTCAAGGTAAGTTGCACATTAATTTTGGGTGATAACAATT AAAGCTTTGTAGTTTCAAGGTTGAATGCACAATCAACAAGCTTTGGAAATTCCAAGGTTTGAAGGGAGTAAAAATTAAAG CTTTGTAGTTTCAAGGTTGAATGCACAGTCAACAAGATTTGGAAATTCCAAGGTTTGAAGGGAGTGGACGGTGCACAAGT GGAAATTGTGGGACTTGGAACTTTTGGAATATCATTAATTTTCCAACAATGAGTTGAGTTGAAAAGGGTTTGGTGGCTTT GAATGAAAAGAGAAGTGAGGAGGTAGAAAGAGTGATGGGTTTGATGTTTGTTCCTGGGTTTAATGGTGGTCTTGTGCTGA AGTTGAGGTTGAAGATGAAGAAGTTAGATGAATGTTCCTAAAAACTGATCTAATAAAATTTAATTTTTGAGAAAATAATA TTTCCATTTTTATTTTTCAAAAAAAAAATAAAAAACCGGGGAACTCACCATAGTTGGTGAGATTCCCCTTGTGTAACTTT ACACAGCCAAAAAGTTGTCCACCATAGATAAATCCATACGGAACTTAAAAAACCGTACTATATTTGATCATGTGTGGCAA ATTTTCAACCATTCATTGCATATTAAAACAAATACGAAATTTTAAATTTCATATTAATACGGAATTTTAAATTCCATATT GAATAAAGTGGGTGTCAAACTCAATAGGTGGGGTGTCAAACCCAATTCCCCTCAACATTATGAGCGAAGCGGTCTCTCTC TCACTTCACTGTAAGTAATTTAGGTATTTTAGGGTTTAGGTTTAGATTTTGAAGAGAGATATAAGGGGGGTTTGGTAGAA GGGAACTTTAAACATTCCTGGGTAAGTAAGGTTGGGAAGATAAGTACAAGTTTCAGAAAAATTATTCTTGGGTGTTATAG ATTCTCAGGCATGCCATTTACATGAGTATCTCACATTCCAATTCCCATGGAAGTTATTTCTCACTAACTTTTCTTTTTAC TTCAAATTTTATATTTTTAATGTCTATTCTTTTTATCTCTCTTCAAAATCCAAACCTAAATACATAAGTAGTTAAGTGAG AGAGATTGATCATTAGATTTGACACCCCACTCATTAGAAATGTCACCCCACTTACGGAAACTTAGTTTCCGAAATATTTC GGAAATATGGTTTCTGAAGCATTTTTTCACTCAAAAGTAGGGTGTTACATGTATTTTGCACTACAAATCACGAATTAATT TCGGAATCTAAGATTCTGAAATAATTCGGAACTTGAAAAACCGAAAATATGGGTGTGAAATCTAATGGTTGGGGTGGCAA ATCCAGTTCTCAGAGAGACTGCTTGGCTCAGAATGTTGAGGGTTGCTCCCAGATTCTTGACTAAATCCCCTCTTCGTACC ATTTCACCCTTTGCTCCTCCTCGTTTCTCCTCGGCTCGTTACATCGATGCTCCCTTCCAGAAAATCCAGATTCCAAGGAA AACAAGTGTGAGTCTCCCTCTTTGCTTTCATACTCTGCTGATTGATTCTCTTTCCATAATGCATTTTTGCTCATGGGTTT CATTTGTTTTGCTCTTTTCATACGAGATTGATTGATTTCATTGCGCGCTAATCTTCTGTTATGTTGTTGTTGTTTATAAT GATTAGACATTTGATGGATATCTTGTTGGTGAGCACGACGCTCATGGAATTGTTTTGCTTCAGGACTGGTTGGGTGTGGA TTATCATGTCAAAAATCATGCTTTGAGGATTTCTCAGCTTGGCCCTGGATTTAAAGTTCTTATTCCAGATATGTGCGGAG GAAACTACGCACAGCAACTGTTTTATGGAATTGATTGGGATGAAGCTCTGATGAAACTTGATTCTTCAACTACATGGCTT CAAACCAATGGTTCAAAAAAGGTTTGTCTCTTTTCATAAAAATTATTCTGCTTTATAATTTTCCTATCCACTACACTGTC CTGGTTAACATACATGTGTCTGAAGAGCCATTTTTGTTTCTATCACCATTCCAATGTTGCAAAAGGTTATAGTGTGTTTG TTCATCCACACTAGATTGGGTGATGAAAATGTGAGTTTGTTCATCCATTAGATTGGATGATGTGAATGTGATTTTTCTCA ATCCAACAACTTTGCTAAATTGTCTTGGAAAGCCAAATATGTAAGTCGATTGTGCTTTCAACCGGAAACAAATGTGAATT GATATTTCATTGTAACAGGTTGGTGTAACTGGCTTTGGTATGGGGGGTGCTCTCGCTATTGCCGGCTCTATCCGGTTTCC ACCATCTTTTGATGCTATTGTAGCTTTTCATGGCTCTCCTCCTCGGCAGGATGACCCTGGCTACGCCAGTGCTCCTGTTC AGGCTCACTTTGGGGAGTTGGACGATTTTGTTGGATTTTCGGATGTTAAGGTATGTTTGCAACGCACATTGCTGGCCATT TGTCTCTTACTTGAGTTCCCTTTCGTCAGTTTATTTATATTATATCCGGTACATTATCCAAATTAATATCACTTCATTTT CTAGTTGGTGTGGGAGGAGCTTCTGTACCTTCCAAATCCTACTAGTTTCTTTCTTAATTATGTGCAGTTTTCTGACTAGA GAGAACACATGCTTGATGTTCTGAGTCAAAATCCTTTGATTCAAGAAAACGTCATTTTATGATATTGTTTGATGTCTCAG ACTGCGAAGGAATTGGAGGAAAATTTTAAGGAATCTGAATATCCATATGAGGTACACATATATCCTGGCAAGGGACACGC ATTTATGGACAGCATGATATTGCCCGATGAAGATGATGCTGAAGTTCAGCTTGCCTGGTCTCGCTTCAAGGAATGGATGA CACGTTACTTGTATAGTTGAATCGCTTCAAGGAATGGATGACACGTTACTTGTATAGTTGAATTGTGAATCAAATTGTGA CCATGATTGCTGTTAAGCTCTAATTAAACATGGTGCTTCTTACTTTTGAGATATTTGACTTGGAATAATTTTGAAACTGT TGTGGTTCTTCTGTATTAAGAGAATATGCTCTTTGGCTTATGGTGCCATTGTTCCTAAGTTCTGATCATGATGTTTTGCC TATAAGAAAACAAATGAAGGTTTTCCATGAAAAGTTTTAAAAGTTTAAGACTGAGACGCATCATTCTTTGAGAATGTAAG GACGCAATTTTAGTTACTAAGTATAACAATAACAAATTAATGCTTCTTATGTTTGAGGATTAATATGATTGGTATTTGAG AACTTTAA
CDS sequence (LotjaGi3g1v0473100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGGGGTGGCAAATCCAGTTCTCAGAGAGACTGCTTGGCTCAGAATGTTGAGGGTTGCTCCCAGATTCTTGACTAA ATCCCCTCTTCGTACCATTTCACCCTTTGCTCCTCCTCGTTTCTCCTCGGCTCGTTACATCGATGCTCCCTTCCAGAAAA TCCAGATTCCAAGGAAAACAAGTGACTGGTTGGGTGTGGATTATCATGTCAAAAATCATGCTTTGAGGATTTCTCAGCTT GGCCCTGGATTTAAAGTTCTTATTCCAGATATGTGCGGAGGAAACTACGCACAGCAACTGTTTTATGGAATTGATTGGGA TGAAGCTCTGATGAAACTTGATTCTTCAACTACATGGCTTCAAACCAATGGTTCAAAAAAGGTTGGTGTAACTGGCTTTG GTATGGGGGGTGCTCTCGCTATTGCCGGCTCTATCCGGTTTCCACCATCTTTTGATGCTATTGTAGCTTTTCATGGCTCT CCTCCTCGGCAGGATGACCCTGGCTACGCCAGTGCTCCTGTTCAGGCTCACTTTGGGGAGTTGGACGATTTTGTTGGATT TTCGGATGTTAAGACTGCGAAGGAATTGGAGGAAAATTTTAAGGAATCTGAATATCCATATGAGGTACACATATATCCTG GCAAGGGACACGCATTTATGGACAGCATGATATTGCCCGATGAAGATGATGCTGAAGTTCAGCTTGCCTGGTCTCGCTTC AAGGAATGGATGACACGTTACTTGTATAGTTGA
Protein sequence (LotjaGi3g1v0473100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGVANPVLRETAWLRMLRVAPRFLTKSPLRTISPFAPPRFSSARYIDAPFQKIQIPRKTSDWLGVDYHVKNHALRISQL GPGFKVLIPDMCGGNYAQQLFYGIDWDEALMKLDSSTTWLQTNGSKKVGVTGFGMGGALAIAGSIRFPPSFDAIVAFHGS PPRQDDPGYASAPVQAHFGELDDFVGFSDVKTAKELEENFKESEYPYEVHIYPGKGHAFMDSMILPDEDDAEVQLAWSRF KEWMTRYLYS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 250 | 234 | 6.3E-79 | – | |
| PANTHER | 17 | 250 | 234 | 6.3E-79 | – | |
| Gene3D | 58 | 248 | 191 | 1.3E-30 | ||
| Pfam | 62 | 247 | 186 | 4.4E-31 | ||
| SUPERFAMILY | 62 | 248 | 187 | 6.01E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0473100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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