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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0473200 |
| Transcript ID | LotjaGi3g1v0473200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-hydrolase superfamily protein; TAIR: AT2G32520.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q7DFU6|YGHX_ECOLI Putative uncharacterized protein YghX; TrEMBL-Plants: tr|V7AGX5|V7AGX5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0473200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89020349..89024480) extracted from Lotus japonicus Gifu genome v1.2.
TATAGCTTAAAGCTTTAAGCTACTAAAATAAGCTCCTTCACCAAACACTTTTAAAGAGCTTTTAAGCTAGTCAAATAAGC TTTAAGCTAGTCAAATAAGCTATAAGCTAGCTGAAATGACATGTCAAACATAGCCTAAATCCCGAATTGAATAGAGTGAG ATGTCAAACTCAATAGGTGGGGTGTCAAACCTAACTCCCAATGGTGAGGGTTCTCAAATCTTCCGCTCCCGGATTCTTGA CTAAAGCCCTTCTTCGTACCATTTCACCCTTTGCTCCTCGTTACATCGATGGTACTAAAGTTCCCTTTGAGAAAATCCAG ATTCCAACGAAATGGAAACAGAGAAAAAATGTGAGTCTTTCTCTTTGCCTTTCATTCTTTGCTAATTGATTCCCTTTCCA TTTATTTATTATCTTGGACCTTTTTCATTTATAATTCTACATTCTATGCTGCTTTTCTTTGTTACCGTCTGGAAACATTG AATTATATTTTTCAACGTGCAATCGATGGGGTAAATTTTATTGCGTGCTAATCTTTCTGTTATGTTGTTGTTTATAATGA TTAGAAATTTGATGGATATCTTGTTGGCAATGGTGAGGGAAACGCTCCTGGAATTGTTCTGCTTCAGGACTGGTTGGGTG TGGATTATCATGTCATAAATCATGCTTTGAGGATTTCTCGGCTTGGCCGTGGATTTAAAGTTCTTATTCCAGAGTAGGAT ACCTAATATTTCTTACACACCATGCAATGTCATATTTATATTGGGAATTTAGATCACTGATGGGTTTGCTTTTGTCCCCA GTGTGTACGGAGGAAACCAAGCCCAATTGTTTAATGGTTATGATTGGGAAGGTGCTATGTTTAAAGTTCATTCTTCAGTT CAATGGCTTAAGACCAATGGTTCAAAAAAGGTTTGTCTCTTTTCATGGTTCAGATTGGTTGATGTGAATGTGATTTTTCT CAATAAAACAAATTTGCTAAACTGTCTTGGAAAGCCAAATATGTAAGTTGGATGTACTTCCAACTGGAAAACAAACTGAC TCTTGGTGAGTTAGTGTGAATGCCAGTTTGGCCTACCTTAGTTTAGTACGCATTGCATATTCTAAAAGAATATGTTAGGA TGGTTAAAGAAAAATGTGAATTGATATTTCATTGTAACAGGTTGGTGTAGCTGGCTTTTGTAAGGCTCTCGCTGTTACGA GCTCTTCCTTTTTTCCACCTATTGATGCTGTTGTAGCTTTCTATGGCATTCCTGGTTCCTTGCTTGCCAATTCCCATTGT CCTGTTCAGGCTCACTTTGGAGAGCTAGATGATCTTGTTGGCTTTTCGGATGTCACGGTATGTGTGCAGGACACGTTTCT GGTCATTTGTCTCTTGCTTGAATTCCCTTTAGTTAGTTTATTTATATTTATATTAGGCTTAAATACTCTAGGGGTCCCTG AAATTGTACCCCGTATCAAAATAAGTCCCTGAAATTTTTTTTTCCGATTCCGGATCCCTGGAATTGTTTTTTTAATCAGA ATAAGTCCCTACACATGTTTTTAGCCTATCTGGCAGATTTTTTGCTGACTCAACATTTACACATGGCTTTTTCATTTATT TTAAATACACATGGAATAAAAATAAAAAAAATTAATTAAATTTAAATCTAATTAACCTATCTACCTAAATCTAATTAAAC CTAATTCCCAAAATCCCTAAATTAAAACCACTAACCGAAATTCCCAAACCAAACCAAAATCCCTAAAATCAATCTTTTCA CACAAAAATACTCTGGCCACCTGCACAGAGCAACAACCTCACCACGAAACTACCATAAAAGAGCATCTCTGCCAAGAGAA ACACAGAATGTGAGATCGAGAAAGAAGAATGAAACAGAGATTGCGTGAGACACACAGTATGAGATCGAGAGAGAGTGAAC AAAGACAAGCAGCGGCGGTGCGATTGGTCGCGTGGCTAAGGCTGTAACAGCAAGGAGCGACGACACTCATAGATTCTCTC TCGCTCTCAATGGCTGAAAGTTGGTTGCCGCTCTCTCTTGCTCTCCCCCGTTCTCTCTCAGTCTCCCAATTCAAAGCCAA ATCTCAACCATCCAAACAAATCTCTGTTTTGCCTCAACAGATCTGATAGGAATTGATTCGATTTCAGATTTCGTTCATGT TGAAGATTTAGGGTTTCAGAAATTGGGGAAGTGGGAAAGAAGAAGATGAAGGAGGAGGAAGAAGTTGTGTTGTGTTTGTA GTGGGAGGTGCGGTGGAAGATGAAAACTAGAAAAGAGAGGGGTTTGAGAAGAGAGTGGTGGGGGTGATGGGCATCTGGAG ATGGAGATGGAGATGAAGAGTGGAGAGAGAATCAGAGAACCCAACGCTAGTTTGTTTGTCTTCTGGTTTTTCATTCTCAA TTCAACTATACTTGTGCTTGCATATGTTTGGTCCTAGGATTGTGTGTGAAAAGATTGACTTTGTTTGAGAATTAATGATT TCTGGGATTTTTTCAGAATTCATGAAGAAGATGAAGTTCATAAGAGGAGGTGATGAACATGATTAATTTCTGGGGATTCT GGGAATTAGGTTAATTAGATTTAGGTAGATAGCTTAATTAGATTTAAATTTAATTTTTTTTTTATTCCATGTGTATTTAA AATAAATGAAAAAGCCACGTGTAAATGTTGAGTCAGCAAAAAATCTGCCAGATAGGCTAAAAACATGTGTAGGGACTTAT TCTGATTAAAAAAACAATTCCAGGGATCCGGAATCGGAATTTTTTTTTTCAGGGACTTATTTTGATACGGGGTACAATTT CAGGGACCCCTAGAGTATTTAAGCCTTTATATTAATATAGCTGCTATATTCTCCAATTCAATATCACTTCATTTTCTTGT TGGTGAGGGGGAGGAGCTTCCCTACCTTCCAAATCCTACTAGTTTCTGTCTAATTGGTATGCATTCTCTTTCCTCCAACA GATCTGTTTGTGCTTGTTAAAAAAACCTAATGATCAAGGCTTGGGAATGAGAAGTGAAAATCATTGTGTTTTTTGGTATG AAAAATGTATGAAGGACTTCTAAAGCCTAGTGATTGTTGGACTAAGACTGTAGTAATCATTGTGTTTTTTTTTCTTACAC TTTTGTCCATCCTTTTGCATTCATCTTCTAAAATTCTATATTGCTTCTATTTAGACCACTACCACCATTTGTATCACAAA AAAAATATAATTTTCAACCATGCATATTTATTTTCTCACAACTACAACCTTCAACAACTGAAATTATAACCTTATCCTTG TTATTTTCATTCTTCTCTCTATTTTTTATCTTCTTATTTTACCTTCAATACCCAGCAAAGAATGCCCTAAGTAAAGTGTA AGAAGTCTTGAAGCTTTTATAACACAGTCCCGCGGCCGCACGAGATATCTTTGAAAGGGAAAACTGTGAGAAGGGCCACC ACCTAGTGAGCCTAGAATTTTACTTCTCAAGGAAACAATACCTCCATAGGCATTTAACCTTTCTATGGTTCTACCATTCC TAATTTGTCAATGCATATATGATGTGAAATACTTTAAATTTTCAATTCAAGTACTTTTGGTGATAACTAACCTCTTTATT TGTTCAGTTTTCTATTCTCGGGCTAGAAAATATTTGTTTGATTGGGGTAGGGAAAGAGTGAGGAAACACGTTGATGGTCT GAGCCTAAAGTTCTTAGATTCAAGAAACATCATCTTATGACATTGTTGGATGTCTCAGGCTGCGAAGAAATTGGAGGGGA AATTGAAGGAATCTCGAGTTCCACATGAGGTGCACATATATCTTGGCTACAGACACGCATTTATGAACGGATCTTCAAAA ACAATCAAGAGGTGGAATGGCGCGGGATTGCCTGATGAATATGAAATTGCAGTTCAACTAGCCCGGTCTCGGCCAAATGA AGATGAAATTGCAGTTCAACTAGCCTGGTCTCGCTTCGAGACATGGATGACAAGGTTCTTGTGTAGTTAGATAATCTCGA AGGGGCCACAAACCTTTATTATTTGTTGTTGTGGTTGATGTTTCCTTTAAATTACATTGGAACCAATGCTGGATCCATTT GGTATTTGAGTAATTGGTCATAGAAGCGACCTTGTACTTAAAATCTTGTGGC
CDS sequence (LotjaGi3g1v0473200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAGGGTTCTCAAATCTTCCGCTCCCGGATTCTTGACTAAAGCCCTTCTTCGTACCATTTCACCCTTTGCTCCTCG TTACATCGATGGTACTAAAGTTCCCTTTGAGAAAATCCAGATTCCAACGAAATGGAAACAGAGAAAAAATAAATTTGATG GATATCTTGTTGGCAATGGTGAGGGAAACGCTCCTGGAATTGTTCTGCTTCAGGACTGGTTGGGTGTGGATTATCATGTC ATAAATCATGCTTTGAGGATTTCTCGGCTTGGCCGTGGATTTAAAGTTCTTATTCCAGATGTGTACGGAGGAAACCAAGC CCAATTGTTTAATGGTTATGATTGGGAAGGTGCTATGTTTAAAGTTCATTCTTCAGTTCAATGGCTTAAGACCAATGGTT CAAAAAAGGTTGGTGTAGCTGGCTTTTGTAAGGCTCTCGCTGTTACGAGCTCTTCCTTTTTTCCACCTATTGATGCTGTT GTAGCTTTCTATGGCATTCCTGGTTCCTTGCTTGCCAATTCCCATTGTCCTGTTCAGGCTCACTTTGGAGAGCTAGATGA TCTTGTTGGCTTTTCGGATGTCACGGCTGCGAAGAAATTGGAGGGGAAATTGAAGGAATCTCGAGTTCCACATGAGGTGC ACATATATCTTGGCTACAGACACGCATTTATGAACGGATCTTCAAAAACAATCAAGAGGTGGAATGGCGCGGGATTGCCT GATGAATATGAAATTGCAGTTCAACTAGCCCGGTCTCGGCCAAATGAAGATGAAATTGCAGTTCAACTAGCCTGGTCTCG CTTCGAGACATGGATGACAAGGTTCTTGTGTAGTTAG
Protein sequence (LotjaGi3g1v0473200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVRVLKSSAPGFLTKALLRTISPFAPRYIDGTKVPFEKIQIPTKWKQRKNKFDGYLVGNGEGNAPGIVLLQDWLGVDYHV INHALRISRLGRGFKVLIPDVYGGNQAQLFNGYDWEGAMFKVHSSVQWLKTNGSKKVGVAGFCKALAVTSSSFFPPIDAV VAFYGIPGSLLANSHCPVQAHFGELDDLVGFSDVTAAKKLEGKLKESRVPHEVHIYLGYRHAFMNGSSKTIKRWNGAGLP DEYEIAVQLARSRPNEDEIAVQLAWSRFETWMTRFLCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 253 | 251 | 1.1E-92 | – | |
| PANTHER | 3 | 253 | 251 | 1.1E-92 | – | |
| Gene3D | 37 | 274 | 238 | 5.5E-30 | ||
| SUPERFAMILY | 51 | 275 | 225 | 4.29E-22 | ||
| Pfam | 52 | 275 | 224 | 2.7E-29 | ||
| PANTHER | 254 | 278 | 25 | 1.1E-92 | – | |
| PANTHER | 254 | 278 | 25 | 1.1E-92 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0473200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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