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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0474700 |
| Transcript ID | LotjaGi3g1v0474700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant/F24K9-26 protein; TAIR: AT3G11590.1 golgin family A protein; Swiss-Prot: sp|Q66GQ2|Y5162_ARATH Uncharacterized protein At5g41620; TrEMBL-Plants: tr|V7AHW0|V7AHW0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0474700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89124722..89128569) extracted from Lotus japonicus Gifu genome v1.2.
TGCCCACTCCCTAATTCCAAGCCATTAAAGGGCTGCTGAAGTTGAACGTGAAACATGAAAGGGCTGCTGAAGTTGAACGT GAAAAGGTGAAAGAATCAAAGAAAACATCACTTTTTAGGGCAATTTACTAATTTTTAATGAAATTAAATGCCCACTCCCT AATTTCTAGGAGAGTAAGATGAAACGACATTTGAAAAACTGTTTTTGTATCGTATCGGGATACGTATCGTGCAATACTCA TGCGATATGTGCGATACAGGTCACGATACGAACACAAAAAGATACGGTCATGAGATACGTATCGTTTGGTTGATTTTCGT ATCGTATCGGGATACATATCGACTACCATGGTCTGCCCCCTTTCCCTCTCACAAGATTTCTCACACTTTGCACCTAAAAG AAGTCTTCTCACCCTTTTTCTCTCTTTCTTTCCCTCTCAACATTTCCTTTTCTTTCCTCCTCAAACGTTTCTCCCCCAAT TATTTTGTCATTTTCCCACTTTTTCTGGTCCTCACAAACCCCTTTCAACATTCAAACACCAGTCACAGTAGCAGTAGAAG AAGAAGAAGATCTTTCATGACCCACTTTGCTAAATTCAAGGCTTAAATAGTGATCATGATGATGATGATGGTGAAACAAC TGGCATGAACCTAGCACACAATTCTCATCACCACCATGTCCTCAATTCATCTTCATCACACCAACAACAACAACAACCTC AACAACGAAGGTATTGTCAACAAAATCAGGAAACGAGGTTGTTCCTCTTCCTCTTCCTCATCTCTGGTTCGAAAATACCG ATTCAAGAGAGCAATTCTGGTGGGGAAGAAAGCAGGGTCGACCACCCCTGTTCCCTTGTGGAAAACTAGCACAACACCTC CTTCTATGGCTACTCCACCACTTCACCATTCTCAGTTGCCACCAAAAGACAAAGAGCTTTCTGTTTCAGCCAGAAAACTC GCTGCTACTCTCTGGGAAATCAATGATTTACCTTCTGCTGACCCAGTTCGAGGTAGAGACAAAGCTGCGAACTTTTCTAG TTCTAGATCGGGATTGTTGAGGCCACATATGTCAGATCCATCTCAGAGCCCTCTTTTAGAGGTAAATTCATGTCAAGTTT CACTTTTTTTTTTTCTGGTTCATTGGGTTTGGTATGAAGCTGTGTGTTTCTCTATTTGGGCAGAGAATGAAAGGGTTTGA AGGTGATGGCCATAAAAGAAGAGTGTCAGGGTTATCTCATCAGCTTCAATCTGGTGATTACTTGTTGGAGGGTTTAGATT CCTGTAGCAGTGCCCGTTTGATTGAGGTAATGTAATATGCATAGCATTCATCATTTTCATAATTATCATCCAGTTTGTTT TAATATTTTTTTATCTGGGCTTAATTAGTTATTTAATATATGTAAAGGAAGATGGATTACAATAATGCATATGCACTTGA CACAAGTTGTGTGGCCATGATAATTTTTTTATAAGTTGTTTACTGTTTACTAGGACTCTATCAAAATACTAAAATTGGTT TGAATTTCGATGTAGCAACTATGACCTCTTAGCTCCTAAGAAATCACTAGTATTGTTTTAAAGCATGTTTCGATCAACTT CTCTTTTCTCATAATCAGTTATGGTGCCTAGAAGCTACTTGCATAAGCTTCTCCACAGACTTCATAATCAATCGTAGAAG GATTTTCACATATACACTAAATATGTGTTTGGAAAGTCCGTTGATTTTCACGTTTCAAAGAGGAGTGATTGAGAAAAAGT TTAGTAGGAGGGTAACTTTTGTAGAGTAAAAACTGGTTCTGGGAGAATTTTAAGTGGATCCAAACATTCTGAACTGGTGT GATATGTCCTTTGCATGGTTTGATGTATCAAGATTAGAGATTAAAATATATATAGATCAGATGAACTTGTTTAAAATTCC ATAACGCATAATGGTTTCTTAATATTTTTCCTCTCTTGGTTATTGGGAAGGATGAAACTGAATCATGTTGAAAACTTGAA ATGCAGAAGAATTGTGGCAAATGCACTGATGGAGTGAAGAGCCGTCTGAAGGAAGCTAGAAGTGGCCTTTCTACATCGAA GAAGCTTCTAAAGGTATTAAATCAAGTATGCATTAGAGAGCATCAATCATCAACCAAGTCCCTTATCTTAGCTCTGGGTA GTGAGCTTGATCGGGTTTGCCACCAAATTGATCTACTCATCCATGAAGATCGCTCAAACCAGAATGACATGGAGTATGTC ATTAAGTGCTTTGCAGAAGAAAAGGCTGCATGGAAAAGTAGAGAGCGAGAAAAGATTCATGATGCCTTAAAAAACGCAGC TGAAGAGCTTAAGGTGGAGAAGAAGTTAAGAAGGCAGACTGAGCGGTTGAATAAAAAGATTGCCAAGGAAATGGCTAATG TAAAAGCTTCCCATTTGAAAGCATCCAAAGAGCTTGAAAGGGAGAAACGTGCAAAGGAAATTCTAGAGCAAATTTGTGAT GAATTAGCCAATGGTATTGGGGAAGACAGAGCGCAGGTAGAGGAATTGAAAAGGGAGTCGGCTAAAGTTCGAGAAGAGGT GGAAAAGGAGAGGGAAATGCTTCAGCTAGCAGATGTTTTGCGCGAGGAGAGAGTTCAGATGAAGCTTTCAGAGGCTAAGT ATCAATTTGAGGAGAAAAATGATGTACTAGAAAAGCTGAGGAATGAGTTTGAGTGCTTTATGAGAACTAAAGATGAAGAA AATGGGGTTGTTTCTCCAGAGTGTGAAAAAATCAAGGATCTTGAGGCTTATTTCAACAATATCTATGGGGGATTACGAAA TGCAGAGAAAGACAATGGTTTGGATGTTGGAGATGATGATGATGGAGATAATGACTCGGATGAGAGTGATCTTCATTCCA TTGAATTAAGCATGGATAATAGAGGCTGCATGTGGAGTTATGCTTTTGAAGATGCTACTCAAGATGACTCAAAGAGAGTT TCAGTTGACAGTATAGGGAGAAAATCTCTCTCTGGAATTCAGTGGGGAAGTATTTGCTTCAACAAGAGAACTTCGAGTTT TAAGAAGAGGGATTTTGTCATCAATGATATTCTTGAAGGTTCTAATCATCTTGATCCTGAGACATCACTTGAACTTCTCT CACGAGCTCGGATACAAGATGATAAGGATGAAGCTCAGAGCAATAGGACAATCAAGGGTTTACAAGACTCCATGCCATGT TCCAATCCTGTTCAGAGAAATGATCAACTGTTAACTCTGCAATGCACTGGGGAAGAAGCTGGGAAAAATGCTCTTCTTGC CTTGGAAGGTGATACAATTTGAAGCTAGAGGCTGCAGGGAGAAAATCCAGATGTTTGAAGAGTTTTGTTAGAGATTGCCT GATTGGTAATGGTAGGAGGTTATTTATCATTGATAGTTTCTATTATTTCTGTTCCAAACTGTAAATGCTGTCATTCCTAG ACTGAATATGTGCAAGCCTTATCATTGGAATTGGTAAATGTGGTAACTGTTAAAGCTATAGCAAGAAACATGTACATATT TAATAGATTAACAATGTAGTTTTCTGCTATGACTTGACCAGAAGCTGCTAGTTAATATTTATTTGGACATCAGTTGGATG CAATGTGAACGAATTACAATCTAATTCATGAAAAAGGTTTTGTTCACTTTATGTTTTCAAGTGCGTTAGAGAAAAAAAAA GCAAATAGCATAATATAAATCAACTTTTTTTCATAAGATCTGACTTGTGCTTCAGAATCACTTGCTGAAGGGTTTCCAAC ATGCAGAAAGGTATGGGAATGTTCTAATTTGAACAGGTTATTTAATCCAGGGGGGACAAAAATTGGTGGCTAGCCATGTC ATTGGCAC
CDS sequence (LotjaGi3g1v0474700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCAATTCATCTTCATCACACCAACAACAACAACAACCTCAACAACGAAGGTATTGTCAACAAAATCAGGAAACG AGGTTGTTCCTCTTCCTCTTCCTCATCTCTGGTTCGAAAATACCGATTCAAGAGAGCAATTCTGGTGGGGAAGAAAGCAG GGTCGACCACCCCTGTTCCCTTGTGGAAAACTAGCACAACACCTCCTTCTATGGCTACTCCACCACTTCACCATTCTCAG TTGCCACCAAAAGACAAAGAGCTTTCTGTTTCAGCCAGAAAACTCGCTGCTACTCTCTGGGAAATCAATGATTTACCTTC TGCTGACCCAGTTCGAGGTAGAGACAAAGCTGCGAACTTTTCTAGTTCTAGATCGGGATTGTTGAGGCCACATATGTCAG ATCCATCTCAGAGCCCTCTTTTAGAGAGAATGAAAGGGTTTGAAGGTGATGGCCATAAAAGAAGAGTGTCAGGGTTATCT CATCAGCTTCAATCTGGTGATTACTTGTTGGAGGGTTTAGATTCCTGTAGCAGTGCCCGTTTGATTGAGAAGAATTGTGG CAAATGCACTGATGGAGTGAAGAGCCGTCTGAAGGAAGCTAGAAGTGGCCTTTCTACATCGAAGAAGCTTCTAAAGGTAT TAAATCAAGTATGCATTAGAGAGCATCAATCATCAACCAAGTCCCTTATCTTAGCTCTGGGTAGTGAGCTTGATCGGGTT TGCCACCAAATTGATCTACTCATCCATGAAGATCGCTCAAACCAGAATGACATGGAGTATGTCATTAAGTGCTTTGCAGA AGAAAAGGCTGCATGGAAAAGTAGAGAGCGAGAAAAGATTCATGATGCCTTAAAAAACGCAGCTGAAGAGCTTAAGGTGG AGAAGAAGTTAAGAAGGCAGACTGAGCGGTTGAATAAAAAGATTGCCAAGGAAATGGCTAATGTAAAAGCTTCCCATTTG AAAGCATCCAAAGAGCTTGAAAGGGAGAAACGTGCAAAGGAAATTCTAGAGCAAATTTGTGATGAATTAGCCAATGGTAT TGGGGAAGACAGAGCGCAGGTAGAGGAATTGAAAAGGGAGTCGGCTAAAGTTCGAGAAGAGGTGGAAAAGGAGAGGGAAA TGCTTCAGCTAGCAGATGTTTTGCGCGAGGAGAGAGTTCAGATGAAGCTTTCAGAGGCTAAGTATCAATTTGAGGAGAAA AATGATGTACTAGAAAAGCTGAGGAATGAGTTTGAGTGCTTTATGAGAACTAAAGATGAAGAAAATGGGGTTGTTTCTCC AGAGTGTGAAAAAATCAAGGATCTTGAGGCTTATTTCAACAATATCTATGGGGGATTACGAAATGCAGAGAAAGACAATG GTTTGGATGTTGGAGATGATGATGATGGAGATAATGACTCGGATGAGAGTGATCTTCATTCCATTGAATTAAGCATGGAT AATAGAGGCTGCATGTGGAGTTATGCTTTTGAAGATGCTACTCAAGATGACTCAAAGAGAGTTTCAGTTGACAGTATAGG GAGAAAATCTCTCTCTGGAATTCAGTGGGGAAGTATTTGCTTCAACAAGAGAACTTCGAGTTTTAAGAAGAGGGATTTTG TCATCAATGATATTCTTGAAGGTTCTAATCATCTTGATCCTGAGACATCACTTGAACTTCTCTCACGAGCTCGGATACAA GATGATAAGGATGAAGCTCAGAGCAATAGGACAATCAAGGGTTTACAAGACTCCATGCCATGTTCCAATCCTGTTCAGAG AAATGATCAACTGTTAACTCTGCAATGCACTGGGGAAGAAGCTGGGAAAAATGCTCTTCTTGCCTTGGAAGGTGATACAA TTTGA
Protein sequence (LotjaGi3g1v0474700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSIHLHHTNNNNNLNNEGIVNKIRKRGCSSSSSSSLVRKYRFKRAILVGKKAGSTTPVPLWKTSTTPPSMATPPLHHSQ LPPKDKELSVSARKLAATLWEINDLPSADPVRGRDKAANFSSSRSGLLRPHMSDPSQSPLLERMKGFEGDGHKRRVSGLS HQLQSGDYLLEGLDSCSSARLIEKNCGKCTDGVKSRLKEARSGLSTSKKLLKVLNQVCIREHQSSTKSLILALGSELDRV CHQIDLLIHEDRSNQNDMEYVIKCFAEEKAAWKSREREKIHDALKNAAEELKVEKKLRRQTERLNKKIAKEMANVKASHL KASKELEREKRAKEILEQICDELANGIGEDRAQVEELKRESAKVREEVEKEREMLQLADVLREERVQMKLSEAKYQFEEK NDVLEKLRNEFECFMRTKDEENGVVSPECEKIKDLEAYFNNIYGGLRNAEKDNGLDVGDDDDGDNDSDESDLHSIELSMD NRGCMWSYAFEDATQDDSKRVSVDSIGRKSLSGIQWGSICFNKRTSSFKKRDFVINDILEGSNHLDPETSLELLSRARIQ DDKDEAQSNRTIKGLQDSMPCSNPVQRNDQLLTLQCTGEEAGKNALLALEGDTI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 555 | 543 | 6.9E-169 | ||
| PANTHER | 13 | 555 | 543 | 6.9E-169 | – | |
| MobiDBLite | 55 | 84 | 30 | - | – | |
| MobiDBLite | 58 | 74 | 17 | - | – | |
| MobiDBLite | 113 | 139 | 27 | - | – | |
| MobiDBLite | 118 | 132 | 15 | - | – | |
| Coils | 284 | 314 | 31 | - | – | |
| Coils | 326 | 374 | 49 | - | – | |
| Coils | 390 | 410 | 21 | - | – | |
| MobiDBLite | 450 | 471 | 22 | - | – | |
| MobiDBLite | 455 | 469 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0474700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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