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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0480300 |
| Transcript ID | LotjaGi3g1v0480300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT2G27810.1 nucleobase-ascorbate transporter 12; Swiss-Prot: sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12; TrEMBL-Plants: tr|V7AGH0|V7AGH0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0480300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:89779132..89785594) extracted from Lotus japonicus Gifu genome v1.2.
ACCAATGCGCCGGTAGCTTCTTCCCGTCATGTCCGACAACCGCCACCGCCCGAGTCCTTCACCACCGGCAATGCCGCCTT CTTCCTGGGCCAAGAAAACCGGCTTCAGGCCCAAATTCTCCGGTGAGACCAATGCCGCTCATTCCGGCCAGATAACCGGA CCTCAGCCCAAGCCCAGAGAATCCCAACCCGTCCCTGATCTTGAAATGGGTCGGGTTCGCCCGCCCCCAAACGGAGTCGC ACAGGGCCAAAAGGTTCCGGTTCCCGCTAAGGACCAGAGTGTAAAGAAGCGGAGGGATTCTGACGGCGTTCCCAGCACCA ACGGCCAGGCAACTCCGGCGGCGGCGGTGGTGGAGGAGCCGTCGCAGCCGCGGAGGACGGCGAGGCATGAGGAATTGGTG GAAGGTTTAACGGTGGATGATGAAGGGTTTGCGTCCAGGCACTTGCATATGAAGTACGAGCTCAGAGATTCACCTGGTTT AGGTATCACTGTTCTGGAATTTCAAGTTAAAGTGGTTTCACTTTCCCCCTTTTTTCATATAGTTGAAATTTTGATGTTGG TTTTTATTGTTATTTTTATGTGGGTTATTGTAGTTCCCATTGGTGTGTATGGTATGCAGCATTACGTTTCGATGTTAGGT TCGTTGATTCTCATTCCACTTGTTATTGTTCCTGCCATGGGAGGAACTCATGTGAGTGGTTTTCGATTTTTTTTTTTTTT GTAATGGTGAAGTTGTTGTGGTAGTGCTGTTATCTGATGTGTTAGTGAATGTAGGAGGAAACTGCTATGGTGGTATCGAC CGTGCTCTTTGTCTCGGGGGTGACTACACTCTTGCATATAAATTTTGGGTCCAGGTTGCCCTTAATACAAGGCCCTTCTT TCGTTTATTTGGCGCCGGCTCTGGCTATTATCAACTCCCCTGAGTTTCAAGCATTAAAAGAAAATGTATGTATCTCTTAC CGTTGCACCTAACAAAATTCTAATAGTTTCTATTTAGTTATTCGAAGATTTCTTATTTGAGCAGTGTGCTAATTAAGCAC AACCAATCAAAAGTGCGAGATAATATAAAAATAACTTCATGATATTTGATGTGCTTTTTATTACTCCCTCCGGTCCTTTT TATAAGAAACACTTTGGAGATTTTTCTTGGTCCTTTTTATAAGAAACACTCTTATAAAATTAAGTCAAATAATCAATACC AATGCAAAGGGACTTATTCCCAATACAAAAATATGGAGGGAAATTGCAAGCACCCAATAGGTATGATCAACATTTATGGT AATTAGCATGATTGTTCTTGTAAAAAGGAAAAAAACATCATTGAAATTAAGCATAGTAGTTAATTTTATAAAAAATATTA GTTTCCTTGGTTTGTGTGATTTTGTCCAAGTTTTTCTTATAAAAAGGACTGGAGGGAGTATTATTTTAGTGCATTTTGGG TTTTTGGATTGGTTGCGCCTAGTGCATAAGTGCTCATGCAAGAATTGCTCAAATGGTCTGGAGTGATATGTGGTTATTTT GAATTTTCTGATGGAATAAGTGAAACCTAGACAGCTGATAAGGCTTTCTTCCTCAATATGCAGAAATTCAGGCATATAAT GAAGGAGCTGCAGGGAGCTATAATTATTGGATCAGCTTTTCAAGCTTTACTTGGATATTCTGGACTTATGTCGCTTTTAG TAAGGTATGATTTTAAGATTTTCTCTACTTGTTTATTCTTGAGGGTATGTTTGGATAAACGTTGAAAGTAGTTAAAATTT CTTTCATGTGTTCCAATATAGAAAAAGTAGAAGAAATAAATTGTTCCATTAGTCTAAAGTCCTTTTAAGCCGGTTTCAAC TCTTTTTTTTAAATCAATAGTTTTTACTGTACATGCTTCGTTCTTCCATCAAACATAATTTATTTTAAAATTTTAAGGAT TGAGGCAATGGGTAATGTTAAATGTTGAGAAATGAAAGCAAAAGAATCATTGAGGCAGTGGTGGAACTTGACCAAAAATA TTACAGTGGAAAAATTATTCACAATTTTTTTTGTAGTTGTTGATTATATTTAATGGATTATAAACATCATTTGGCATCTT ATGATGGATACATTATTCTAAAGAAAATCAAAAGAGAGGGAAGACGTTGCTTTATTCTAGGGGAAATATATGAGATACTA TAGATAAGATTTCCTGGTCTTGGTTAAACTAAAGCCAGCAAACTAACAAAAAGATAGAGAAGGGTAATAATCCTAAGAGA ACTGTCTTAACAGAACGGTAGATAATAATCCTAATAGAATTATCTCAAGATATCATACAACAAAACACATATCGCAACAG TTAGGTTAGAGTACTCATAATTTTAGTTTTTATAATTAAGAGACTTATCATTCTTCCATGGAAATGCTCCATGTTTCAAA GGGTTGCGTATAGCTTGTTTGAATTTTAATTCCACATGGTTCCTTCCCACTCATATATATCACTCCCCTCCCCTTTTTTT CGGGTGCAACGTGGAACTTTGTCCTTTTCCTTCTCTCATGATTTAAATAAGTGCCAGGATTTTCTGATATAAAAAGGTCA CATTTCATATCTTTTTCTGTTCAGTTTTTACCTGATAATGACCCCATTTTATGTTTTTCCTTCAGATTGATCAATCCAGT TGTTGTAGCCCCGACTATTGCTGCAGTTGGACTTTCGTTTTACAGTTATGGTTTTCCATTAGTGGGTACATGTATTGAGA TCGGTGCAGTACAGATATTAGTGGTCATTGTTTTTTCACTTGTAAGTTTGTTCCATGGACCTTATTACTATTTTTTGAAT ATTCATTTATATAATTTTTTTTAGAAAGTCCAGGGTGTATATTGGATTGGTTGTTGCACTGTGCTAAAACTTGTAATCTG TTATTTCTTGCTTTTCTACAGTATCTTCGCAAGATATCGGTTCTTGGACATCGCATATTTCTAGTATATGCGGTAAGTTG AATGTTATGATCTTTCTAAGTTTTCAGTTGTGCAATAAAATTTGTATTGGTGTAATGACTGGTTTTCTGTTTTCTTCACC TAACTGCCAGGTTCCTTTGGGTCTAGCAATTACATGGGCATTTGCTTTCTTGCTGACTGAAGCAGGAATATACAGTCACA AAGGATGTGATATAAATGTACCTGCATCCAATATGGTTTCAGAGCACTGCAGAAAGCATTTTTCAAGGATGATCCATTGT CGGGTGGATACTAGTCAGGCATTGAAATCCTCTCCATGGTTTAGATTTCCATATCCACTACAATGGGGTGCCCCTCTCTT CAACTGGAAAATGTCTCTTGTAATGTGTGTGGTTTCCTTAATCTCATCTGTGGATTCGGTTAGTTTTATTCCATTTCTAT TTGGTTGTTGTAATTTATTTATCTTGGGTCTTAGTATGCTGATAATTTAACTTGCTTGTGTTACTGTAGAGAAACTAATT AACTACTGAGTCCTTGTGCCGTCTTTGTACGATGTTCTTTGATGGAAAATTACTATTTGGGCCTACATAAATAATGTGTT TAATAAAACCGATGGGTTTGATTCAGAATTAAGGAACTTGCATATGCTGTTCACCCAAGCCTATTTGTGACTTCATTTTA AAACATTGTAGGTTGGGTCATACCATGCATCTTCATTATTGGTAGCATCCAGACCTCCAACTCCAGGAGTTCTTAGTCGA GGAATTGGTTTGGAAGGTCTTTCTAGTGTCTTGGCTGGTCTCTGGGGAACTGGAACTGGGTCTACAACTTTAACTGAAAA TGTTCACACAATTGCGGTGACTAAAATGGGAAGCCGCAGGGCAGTTCAACTGGGTGCATGCTTTCTGATAGTGTTGTCTC TTGTGGGTAAGTATTTATTATCTCTTTGTTCTTGGATGGATCTAACCTTCACTGGAAATACACTTACTAGTTACTATATG AGCAACAAGTTATTGGGATGATAACCGAAAAGCCATTTGGATTGTATGCATTGTTGATATTTCTCATAAGGGGCTCTTGC AGTTTGTGGCATTATTTATCATGCAATTTCTTGGTTTCCTTGGTTCCACAATGACATTAAAATTTCATGTTGCTGGTCTG TGGCAATTAGGCCTATTGCTTAGCATGTTACGTTTGCAAGCATAATTTTTTGAAATCATGCTGCCTGAAGAATGAGAGGA AGTAATTGAGTAACAAATCCTTCATTAATTTCATTTATTGTTACACTCAACTGAGTTCTTAATTTTTAGTCCTGTCAGTT CTTGTCCAAACAAATGGTTACTGCAATATGTACTTGATCAATAATTTCCAAAACAAAGGGCTATAGTTTTTGTGGTCCAA GTCTTCTTAGTACTAAATATTTGAATATATGTCAAATTATATACTAGTGTGAAATTCTTTTAGGTTATTGTGAATATTTA GCTTGAGAGACCGTGGGAGGAAGTCAAATCTAATGTAGAATGTTCGAGATTCATATATAACCACAATTGTGATACCATTT AGGGATTACATTAGGAATGTTACTTTAGTTAGGAGCACCTATCTCCATACCTGCATTTTAGAAAAACACGTGTACTTATT ACCTATATATGATTCAAGACTAAAACTCTAGCAGTTTTATATTGCATTTAACAGTGCTCTAATAATGCTACTGAATAATC TGGTCTTTAAGCCCGAAACTTACAAAATGTTAGGAAGGAAATGAGCAATTATGTAGATTGAAATATTCATTATATGATGT TGACCAAATAGAAAAATGTGAAAACAATTATCACAGTTTATGGACCTTTGATTTAATTCTATGAACTACTGGAGGAATGC TTGTGGGAGAAATTTTCCACTACTTTGACCTACCTACTTAAAAACTACTGGGTATAAGCCTTTTATAACTAATGATTGAG AGTGATCTATCTTCCAAGATCTTGCCTTAAATTTTTCTGTTAATTCAGAATGCCCTAAAGCAGTATTGTTAATAGCATTG CATAAATTCTAATTCTAAGGAAAACAGTGTGATAGAACTCAGAAAATCAGCAGTAGTTTATTGATAGAACCCTAATTCCC AATTGGGGATTAGGGGAAAGATACATGAGAGAGATGCCAAACACCCTCTCTAACCCTAGAAAGAGAACCACTTCTCTCTC TAAACCCAATTCCTAACTGAATACCAAGATAACCTAATGCTCTCTAATCACACTTATTTATAGAAAACATGCCTCTTAAC CCTCTAACTAACTAACAAACTACTGACCCCACTTAACCACTAACAAGCTAACCCCAGTTACCTATCACAGTGTCTGTGAT AAAAGTGGTATGGAGCTTCTGAGATACTTTCCCAGTGATTGTACACATATTTGCAAATTTATCCATGTTTAATTATGTTT ATGCCATTCAACAGGTAAGGTTGGAGGGTTCATTGCTTCAATTCCTGAAGTCATGGTTGCTGGTCTCCTTTGCTTTATGT GGGCAATGCTCACAGCTTTGGGCTTGTCAAATCTACGCTACAGTGAGGCTGGAAGCTCTCGCAATATCATCATAGTTGGG TTATCATTGTTCTTCTCTCTTTCGGTGCCTGCTTACTTTCAACAATACGACATCTCTCCAAATTCCAACTTGTCTGTGCC TAGTTACTTTCAGCCCTACATTGTAGCTTCTCACGGGCCTTTCCACTGCAAATATGGAGGGGTAGGTCGTTGTGTCATGT CTTATTTACTATCATGAATCTTGTGCTTGAATTTGCTCATGTCAAAAAATGCTATCAATTTGTTACCTACTTTAAGGTTG TTTAGAAAGGATAAAGGCCACTTTCATCTCTTGGGTGAGTTCTGCTGACAAAACTATATTATTGAATAGACTTAAATAAG GTTTTAATCCCTCATTTTACAGCCAGATTTCATTATAGTACCTAACATCTAATTTTATAGTTTTGGTCCCTACTTTTACA TATAACTTTGTTATCAGTCATTGTCTCTCCTAAACTTTAGTAATATTGGGAATATCTACTGCTCCCGGGCCGGCATCATA ATATCTCACTGCTAGCTAGTGATGTAACTTACAAAGGGCCACTTCATCATTGCCCCACTTCTAGTGTAGTCGGATATGAC CTACTGCTGCTGCATAGTTTTGACTAGCATGTATAGGATATCTTGAATATTTTTGCAGAATTAGCTTTAATTATGTGGTT CCCTTGTTATTTAAGCCCTTGAATGATGTCTACATTTCTTGTTTTTCTGAAAGAACACTAGTTAATTTGTTCCTTTTGCA GTTGAACTATGTCTTGAACACGCTTCTTTCACTACACATGGTGATAGCGTTTCTTGTTGCTTTTATCCTGGATAATACTG TACCTGGCGGTCGGCAGGAACGTGGGGTATACGTTTGGTCCGAATCTGAGGTTGCTAAAAGAGAGCCTGCTGTTGCCAGT GACTACGAATTGCCCTTAGGAGTTGGTCGGATTTTCAGATGGGTGAAGTGGGTTGGCCTCTGA
CDS sequence (LotjaGi3g1v0480300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCGACAACCGCCACCGCCCGAGTCCTTCACCACCGGCAATGCCGCCTTCTTCCTGGGCCAAGAAAACCGGCTTCAG GCCCAAATTCTCCGGTGAGACCAATGCCGCTCATTCCGGCCAGATAACCGGACCTCAGCCCAAGCCCAGAGAATCCCAAC CCGTCCCTGATCTTGAAATGGGTCGGGTTCGCCCGCCCCCAAACGGAGTCGCACAGGGCCAAAAGGTTCCGGTTCCCGCT AAGGACCAGAGTGTAAAGAAGCGGAGGGATTCTGACGGCGTTCCCAGCACCAACGGCCAGGCAACTCCGGCGGCGGCGGT GGTGGAGGAGCCGTCGCAGCCGCGGAGGACGGCGAGGCATGAGGAATTGGTGGAAGGTTTAACGGTGGATGATGAAGGGT TTGCGTCCAGGCACTTGCATATGAAGTACGAGCTCAGAGATTCACCTGGTTTAGTTCCCATTGGTGTGTATGGTATGCAG CATTACGTTTCGATGTTAGGTTCGTTGATTCTCATTCCACTTGTTATTGTTCCTGCCATGGGAGGAACTCATGAGGAAAC TGCTATGGTGGTATCGACCGTGCTCTTTGTCTCGGGGGTGACTACACTCTTGCATATAAATTTTGGGTCCAGGTTGCCCT TAATACAAGGCCCTTCTTTCGTTTATTTGGCGCCGGCTCTGGCTATTATCAACTCCCCTGAGTTTCAAGCATTAAAAGAA AATCAGAAATTCAGGCATATAATGAAGGAGCTGCAGGGAGCTATAATTATTGGATCAGCTTTTCAAGCTTTACTTGGATA TTCTGGACTTATGTCGCTTTTAGTAAGATTGATCAATCCAGTTGTTGTAGCCCCGACTATTGCTGCAGTTGGACTTTCGT TTTACAGTTATGGTTTTCCATTAGTGGGTACATGTATTGAGATCGGTGCAGTACAGATATTAGTGGTCATTGTTTTTTCA CTTTATCTTCGCAAGATATCGGTTCTTGGACATCGCATATTTCTAGTATATGCGGTTCCTTTGGGTCTAGCAATTACATG GGCATTTGCTTTCTTGCTGACTGAAGCAGGAATATACAGTCACAAAGGATGTGATATAAATGTACCTGCATCCAATATGG TTTCAGAGCACTGCAGAAAGCATTTTTCAAGGATGATCCATTGTCGGGTGGATACTAGTCAGGCATTGAAATCCTCTCCA TGGTTTAGATTTCCATATCCACTACAATGGGGTGCCCCTCTCTTCAACTGGAAAATGTCTCTTGTAATGTGTGTGGTTTC CTTAATCTCATCTGTGGATTCGGTTGGGTCATACCATGCATCTTCATTATTGGTAGCATCCAGACCTCCAACTCCAGGAG TTCTTAGTCGAGGAATTGGTTTGGAAGGTCTTTCTAGTGTCTTGGCTGGTCTCTGGGGAACTGGAACTGGGTCTACAACT TTAACTGAAAATGTTCACACAATTGCGGTGACTAAAATGGGAAGCCGCAGGGCAGTTCAACTGGGTGCATGCTTTCTGAT AGTGTTGTCTCTTGTGGGTAAGGTTGGAGGGTTCATTGCTTCAATTCCTGAAGTCATGGTTGCTGGTCTCCTTTGCTTTA TGTGGGCAATGCTCACAGCTTTGGGCTTGTCAAATCTACGCTACAGTGAGGCTGGAAGCTCTCGCAATATCATCATAGTT GGGTTATCATTGTTCTTCTCTCTTTCGGTGCCTGCTTACTTTCAACAATACGACATCTCTCCAAATTCCAACTTGTCTGT GCCTAGTTACTTTCAGCCCTACATTGTAGCTTCTCACGGGCCTTTCCACTGCAAATATGGAGGGTTGAACTATGTCTTGA ACACGCTTCTTTCACTACACATGGTGATAGCGTTTCTTGTTGCTTTTATCCTGGATAATACTGTACCTGGCGGTCGGCAG GAACGTGGGGTATACGTTTGGTCCGAATCTGAGGTTGCTAAAAGAGAGCCTGCTGTTGCCAGTGACTACGAATTGCCCTT AGGAGTTGGTCGGATTTTCAGATGGGTGAAGTGGGTTGGCCTCTGA
Protein sequence (LotjaGi3g1v0480300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSDNRHRPSPSPPAMPPSSWAKKTGFRPKFSGETNAAHSGQITGPQPKPRESQPVPDLEMGRVRPPPNGVAQGQKVPVPA KDQSVKKRRDSDGVPSTNGQATPAAAVVEEPSQPRRTARHEELVEGLTVDDEGFASRHLHMKYELRDSPGLVPIGVYGMQ HYVSMLGSLILIPLVIVPAMGGTHEETAMVVSTVLFVSGVTTLLHINFGSRLPLIQGPSFVYLAPALAIINSPEFQALKE NQKFRHIMKELQGAIIIGSAFQALLGYSGLMSLLVRLINPVVVAPTIAAVGLSFYSYGFPLVGTCIEIGAVQILVVIVFS LYLRKISVLGHRIFLVYAVPLGLAITWAFAFLLTEAGIYSHKGCDINVPASNMVSEHCRKHFSRMIHCRVDTSQALKSSP WFRFPYPLQWGAPLFNWKMSLVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSTT LTENVHTIAVTKMGSRRAVQLGACFLIVLSLVGKVGGFIASIPEVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIV GLSLFFSLSVPAYFQQYDISPNSNLSVPSYFQPYIVASHGPFHCKYGGLNYVLNTLLSLHMVIAFLVAFILDNTVPGGRQ ERGVYVWSESEVAKREPAVASDYELPLGVGRIFRWVKWVGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 117 | 117 | - | – | |
| Phobius | 1 | 161 | 161 | - | – | |
| MobiDBLite | 34 | 48 | 15 | - | – | |
| PANTHER | 66 | 681 | 616 | 0.0 | – | |
| PANTHER | 66 | 681 | 616 | 0.0 | – | |
| TMHMM | 150 | 172 | 23 | - | – | |
| Pfam | 156 | 574 | 419 | 3.1E-69 | ||
| Phobius | 162 | 181 | 20 | - | – | |
| Phobius | 182 | 186 | 5 | - | – | |
| TMHMM | 187 | 209 | 23 | - | – | |
| Phobius | 187 | 206 | 20 | - | – | |
| Phobius | 207 | 212 | 6 | - | – | |
| Phobius | 213 | 231 | 19 | - | – | |
| Phobius | 232 | 250 | 19 | - | – | |
| Phobius | 251 | 270 | 20 | - | – | |
| TMHMM | 251 | 273 | 23 | - | – | |
| Phobius | 271 | 276 | 6 | - | – | |
| TMHMM | 277 | 299 | 23 | - | – | |
| Phobius | 277 | 295 | 19 | - | – | |
| Phobius | 296 | 300 | 5 | - | – | |
| Phobius | 301 | 322 | 22 | - | – | |
| TMHMM | 301 | 323 | 23 | - | – | |
| Phobius | 323 | 333 | 11 | - | – | |
| TMHMM | 333 | 352 | 20 | - | – | |
| Phobius | 334 | 353 | 20 | - | – | |
| Phobius | 354 | 413 | 60 | - | – | |
| Phobius | 414 | 432 | 19 | - | – | |
| Phobius | 433 | 497 | 65 | - | – | |
| Phobius | 498 | 519 | 22 | - | – | |
| TMHMM | 498 | 520 | 23 | - | – | |
| Phobius | 520 | 524 | 5 | - | – | |
| TMHMM | 525 | 544 | 20 | - | – | |
| Phobius | 525 | 544 | 20 | - | – | |
| Phobius | 545 | 555 | 11 | - | – | |
| Phobius | 556 | 574 | 19 | - | – | |
| TMHMM | 557 | 574 | 18 | - | – | |
| Phobius | 575 | 610 | 36 | - | – | |
| TMHMM | 609 | 631 | 23 | - | – | |
| Phobius | 611 | 631 | 21 | - | – | |
| Phobius | 632 | 681 | 50 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0480300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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