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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0487900 |
| Transcript ID | LotjaGi3g1v0487900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | P-loop containing nucleoside triphosphate hydrolases superfamily protein; TAIR: AT5G60760.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FJH9|LPAH1_ARATH P-loop NTPase domain-containing protein LPA1 homolog 1; TrEMBL-Plants: tr|A0A151TNC8|A0A151TNC8_CAJCA Uncharacterized protein DDB-G0273453/DDB-G0273565; Found in the gene: LotjaGi3g1v0487900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90565335..90567773) extracted from Lotus japonicus Gifu genome v1.2.
AGGATCCGAGAACGGAAGGAGTCTGTGACAGTGCTGTTGTGTGGCACTAGTGGCTGTGGCAAATCCACATTATCTGCATT ACTGGTATTTTTACATAGAGAAATACTTGTTTGTTTTTCAAATATAAATATGCAGTTCTAGTTTTTACTTATTTTGTGGT AGGATACAGATGTGATAATGAAGTTTAGTTGAGAACTTGAAATAGAGTACTATTTATAACTTGCGTGCCATTTGCATCTT CACTTCAGGGTGGCAGGCTGGGAATTACAACAGTGGTCTCAACTGATTCTATTAGACACATGATGAGAAGTTTTGCTGAT GAGAAGGAGAACCCCTTGTTGTGGGCTTCTACCTACCATGCGGGCGAGTGTTTGGATCCTGTTGCTGTCGCAGAAGCTAA GGCCAGAAAGAAAGCGAAAAAACTGGCTGGTGTCTCACATTCACATCACAAGGATGAAGCAGCTGATGGAAGCAAATCTG ATTTACGGACATTGGATGTGGGCTCGGGTGGTACAGAATTGCTAAGTCCGAAACAAATGGCTATTGAAGGATATAAGGCA CAGAGCGAGATGGTCATTGACAGTCTTGATAGGCTAATCACTGCCTGGGAAGAAAGAAAAGAGTCAGTTGTTGTTGAGGG TGTTCACTTGAGCCTCAATTTTGTTGTAAGTCAGATTTTTATCAGTGTCTTTTACTATTTCTTTTCTAGTGAATGTCAAT TTATGCTTCTCTGTTTTTCTCATCTGCTAATATCAAAACTTGAATACTGATGCAGATGGGGCTCATGAAGAAACATCCGT CTATTATACCATTCATGATATACATTACAAATGAGGACAAGCATATGGAAAGATTTGCTGTACGAGCAAAGTATATGACC CTAGACCCAGCTAAAAACAAGTATGTAAAGTATATCCGAAACATCAGAACAATCCAGGATTATCTCTGTAAGCGTGCTGA AAAGCATTTAGTTCCCAAAATAAACAACACAAATGTTGACAAGAGTGTTGCAGCCATCCATGCAACTGTCTTCAGCTGCC TTCGAAAGCGTGAAGCTGGGGAACAACTATATGATCCTGTTAGAAATACTGTAACAGTTATTGATGAGGAATATAGAAAT CAATGTGCAGCCAATTCTGTGAGCTCCAAAGGAATGTTTCAATTGATCCAGAGAAAAGGTTCTTCCAGGAATCTGATGGC TCTAGTTAATAACGATGGGTCTGTGGCAAAGGCGTGGCCTGTTAATCTAGTTGACAGTAATGGAAAGCCTATATTGGCTC ATGGACCAGAGAATGGAATTGGACATCCAATGTACGGTCCCTTGCGGATTGGTAAGGCAGAACCTGTAAATCTTCAGTTT GGTTTTTATGGGATCAGTGCTTGGCCCAGTGATGGTGGCACTAGTCACGCGGGAAGTGTTGATGAGTCGAGAGCTGATGG GACTGATACCGGCAGTAGATATCTATCCTCTTGCTGTAGCTCGCCAAGGATGTCGGATTTCCCCGCAAAGGAGGTAAACT TGAACATTTTTGTAAATTTATCATCTTGTTCAACTTGTTAAATTTTAATGGTGGAAAATGTCGAATAACAAAATAAATTG ACATTTGGTGAATTTTTTTCCATATATTTTCAGCTCAAGGAAGACTTCTCGGTGCATGGTAGTGATGAAGAAATCGATGA TCAACCAGATGCGGGCAGTGATGAGGATTTCAGTGATGACGATCACAAACTTGACCATGAGGAGGTAGACTTCAGTTTTT ATGTTAAGATGAATGATTTACCTATCTTAAATATCTATATATGTGATAAGTTTTCCCCACTGAAGAATTTCACGTCTTCT TGGGTGCCTTGGCTTTGGTATTGTCCTTGCTAGCCTCAATGGCAAGAATTGACAATATTTGTTTTTGCTTTCCATGGCAA TGGGTTAGGGTTACCACTTCGAAATGAATTACCTATAAGCTCTATTTTGAACAGTAGTATGTAACTATTTTTAAGCTCTA TTTTGAACAGTAGTATGTAACTATTTTTGAGTCGTCTTTCATTATTTTGCAGGTAGGATCAGTTGATGAGGAATCAACAA AGTCTGATGAAGAGTATGATGATCTTGCAATGCAATGTGTTCAGGAAAATGGTTATTGGTCAGACGACGATGAGGAGTTT AAGAGCAGGCTCGCTGCTGTTGCCGGTGAAATTCATGGGAACAAGTATCGTGAAAACCTGGATCTGTTCCTCAGAACTAG AAGCGAGCCGATGACCATGGGGGTTGCGTCTCCAGAGCCTCCTTGCTCTTATTCTTCTTTGCTCATGGAAAAGAGTGAGA GGAAACTAACACCAGCTGGCAGAGCCAAATTAAGAAAACGTTCACTTAGCATTCCTGCATTAGGAAAACATAGATCAGCA ATCAATGATCCAATCCTTTCTGGTGCTCCTCAAAGGTAG
CDS sequence (LotjaGi3g1v0487900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAGAAGTTTTGCTGATGAGAAGGAGAACCCCTTGTTGTGGGCTTCTACCTACCATGCGGGCGAGTGTTTGGATCC TGTTGCTGTCGCAGAAGCTAAGGCCAGAAAGAAAGCGAAAAAACTGGCTGGTGTCTCACATTCACATCACAAGGATGAAG CAGCTGATGGAAGCAAATCTGATTTACGGACATTGGATGTGGGCTCGGGTGGTACAGAATTGCTAAGTCCGAAACAAATG GCTATTGAAGGATATAAGGCACAGAGCGAGATGGTCATTGACAGTCTTGATAGGCTAATCACTGCCTGGGAAGAAAGAAA AGAGTCAGTTGTTGTTGAGGGTGTTCACTTGAGCCTCAATTTTGTTATGGGGCTCATGAAGAAACATCCGTCTATTATAC CATTCATGATATACATTACAAATGAGGACAAGCATATGGAAAGATTTGCTGTACGAGCAAAGTATATGACCCTAGACCCA GCTAAAAACAAGTATGTAAAGTATATCCGAAACATCAGAACAATCCAGGATTATCTCTGTAAGCGTGCTGAAAAGCATTT AGTTCCCAAAATAAACAACACAAATGTTGACAAGAGTGTTGCAGCCATCCATGCAACTGTCTTCAGCTGCCTTCGAAAGC GTGAAGCTGGGGAACAACTATATGATCCTGTTAGAAATACTGTAACAGTTATTGATGAGGAATATAGAAATCAATGTGCA GCCAATTCTGTGAGCTCCAAAGGAATGTTTCAATTGATCCAGAGAAAAGGTTCTTCCAGGAATCTGATGGCTCTAGTTAA TAACGATGGGTCTGTGGCAAAGGCGTGGCCTGTTAATCTAGTTGACAGTAATGGAAAGCCTATATTGGCTCATGGACCAG AGAATGGAATTGGACATCCAATGTACGGTCCCTTGCGGATTGGTAAGGCAGAACCTGTAAATCTTCAGTTTGGTTTTTAT GGGATCAGTGCTTGGCCCAGTGATGGTGGCACTAGTCACGCGGGAAGTGTTGATGAGTCGAGAGCTGATGGGACTGATAC CGGCAGTAGATATCTATCCTCTTGCTGTAGCTCGCCAAGGATGTCGGATTTCCCCGCAAAGGAGCTCAAGGAAGACTTCT CGGTGCATGGTAGTGATGAAGAAATCGATGATCAACCAGATGCGGGCAGTGATGAGGATTTCAGTGATGACGATCACAAA CTTGACCATGAGGAGGTAGGATCAGTTGATGAGGAATCAACAAAGTCTGATGAAGAGTATGATGATCTTGCAATGCAATG TGTTCAGGAAAATGGTTATTGGTCAGACGACGATGAGGAGTTTAAGAGCAGGCTCGCTGCTGTTGCCGGTGAAATTCATG GGAACAAGTATCGTGAAAACCTGGATCTGTTCCTCAGAACTAGAAGCGAGCCGATGACCATGGGGGTTGCGTCTCCAGAG CCTCCTTGCTCTTATTCTTCTTTGCTCATGGAAAAGAGTGAGAGGAAACTAACACCAGCTGGCAGAGCCAAATTAAGAAA ACGTTCACTTAGCATTCCTGCATTAGGAAAACATAGATCAGCAATCAATGATCCAATCCTTTCTGGTGCTCCTCAAAGGT AG
Protein sequence (LotjaGi3g1v0487900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMRSFADEKENPLLWASTYHAGECLDPVAVAEAKARKKAKKLAGVSHSHHKDEAADGSKSDLRTLDVGSGGTELLSPKQM AIEGYKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIYITNEDKHMERFAVRAKYMTLDP AKNKYVKYIRNIRTIQDYLCKRAEKHLVPKINNTNVDKSVAAIHATVFSCLRKREAGEQLYDPVRNTVTVIDEEYRNQCA ANSVSSKGMFQLIQRKGSSRNLMALVNNDGSVAKAWPVNLVDSNGKPILAHGPENGIGHPMYGPLRIGKAEPVNLQFGFY GISAWPSDGGTSHAGSVDESRADGTDTGSRYLSSCCSSPRMSDFPAKELKEDFSVHGSDEEIDDQPDAGSDEDFSDDDHK LDHEEVGSVDEESTKSDEEYDDLAMQCVQENGYWSDDDEEFKSRLAAVAGEIHGNKYRENLDLFLRTRSEPMTMGVASPE PPCSYSSLLMEKSERKLTPAGRAKLRKRSLSIPALGKHRSAINDPILSGAPQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 527 | 527 | 6.3E-272 | – | |
| PANTHER | 1 | 527 | 527 | 6.3E-272 | – | |
| MobiDBLite | 41 | 63 | 23 | - | – | |
| MobiDBLite | 46 | 60 | 15 | - | – | |
| SUPERFAMILY | 88 | 213 | 126 | 4.16E-17 | ||
| MobiDBLite | 329 | 357 | 29 | - | – | |
| MobiDBLite | 376 | 420 | 45 | - | – | |
| MobiDBLite | 393 | 410 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0487900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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