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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0487900 |
| Transcript ID | LotjaGi3g1v0487900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2-phosphoglycerate kinase; TAIR: AT5G60760.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FJH9|LPAH1_ARATH P-loop NTPase domain-containing protein LPA1 homolog 1; TrEMBL-Plants: tr|A0A151TNC8|A0A151TNC8_CAJCA Uncharacterized protein DDB-G0273453/DDB-G0273565; Found in the gene: LotjaGi3g1v0487900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90565335..90570559) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGCGATGCCGGGAAGATACTCTACATCGTCGTTCTTGACGCTGACAAGAAGGACGATAAGGCTAAAGTCTCCTTCCG CTACACGCGTTCTGTTCTTCAAAGCACTCTCCAGCTTATGGGATGCAAAGCGAGGCATGCCTTTAAGGTATATAAATTCT CAACATTCTTCTTCGTCTTTTTCTGCTCTCTATTTTCTGAATTTTAGAATCTGGTTTTGTGTGCTGTGTTGATTGGTATT TGAGATTTGAGAATGAAAGATGTTGTTGTTGTTGTTGTTGCTATTTTTTTTTACCGACGATTTGGGATTTTCCTGTCTAC ATTCGAAGGTGTTTTGATCTGTGTTCTGGTTGTGGATTTGATGTGGTTTTTAGTGGAAATTTTGGTGGAGAATTTGAGGA ATATTTTGTTTTTGTTGAAAATTGTTTTGTTGGGTAGCTGACGGGAAGGTGTTTGACTTGTTTGTTGATTGGATTTGCTA TTTCGTGTTCTTCTGGGCCAGTGTTCCGTTGACCCGATGGCGCGGTGTCGTCGTCACTTTCGGTTTGTTTTTATGTTTTG ACTGGGTTGTATTTGCTTCCTTGCCTTTGTCCGGGTCTTCAATGATTCCAGGCGTGTGAAATAAGAAAGTTCTTAGCATG CATAATTGGGTCAGGCTTTTGGAAGAATTGATTCTGGTAAAATTGATTTATGTTAAAAGTGAAGTGGTTTCTATTGGGTA ATATTGTGAAATTTAGTTGTGGAACCCACAATTGACTTTGATCCATTGCACAAGTTAGGTTTTGTAGCTTCATGGCATAA TTAGAATCAATTGTGAAAGAAAAAATCTAATCCAAAAAAATGATTTGGACAGTAATGAATCAATTCTGACATTTGCAGAA GGGCATCCAAACATCCTAATAAAAGTTAACCATTGTATTTAGCATGAGTTGAAATGGTTAGGAAATTTTCATATGTTCTG TTTTTCCTCCATAGTAGTTTTCATTCAGTTGAATGGAATAATGGATTGTAGTGGATTGTTTAAATTCAGTTCTAGAGGAA ATTTAAGTAAACTGGAAGCACCGGTCAAAAGAGTTCACCAATGTAAAAAATTAAATGATAGTTAAATGTTCAGGGAAGTC TTGGCTGTTGGTAAGTCTGTGTTCTTCGTTAAGAACTTGCAGTAGTCATTTTCAAGTTTTTATGCTTCTAATGAATATTT GATATGTGATGGTCTCTTCGGTAATTAGTTTATGGCATCTTTTAACTGAGTTGTATTGAGTAATGTCTTACATGTCTTGG GCCTGGTTAATTATTTCATATTAGACAACCCTTGACTGAGAGTTATACCTCAGCTAAGCATAACTTTGGTTAATTATTTT TCCTTTTCCTCTTATCAGATCAGCCAAAGAGTTTTTGAAGTCACAAGGAGCAAGAGTTCTACTGATATTTCAAAGCCTGA AGCAGTTGTGTTATCAGGCCCTGATTCGAAGAAAGATAGTAGTTATGCTGGAGTAGACTTAGGCAACCAATTCCTTTTAG GGAAAGATTATTTTAGAAGTAAAAGCGTACCATTTGAGCTGTACAAAAGGCGCACATCAGTATTCGTTCGCAGAGAAACT TTTCTAGACATTATCTGTGATGCTCTGGCTGAGTACAAGTATATGGGTCCCAACCAGAGAGAAGACTTGGCTCTAGCCTG CAGGTACCACCATTGTTTTATATCTTTATGTGGACAATATTTATCTATAGTAACCTGAATAGAAGCATGGAAAAGAATAA GTCTCACTATCGTTGCATCATATGCTCGGATGTAATGGAATCTATTAAGTTATTTGATTAGATATGGTTTGCCTTGGTTT CCATTTTCATGATCAAGATGTTCTTGTAATTGTTGCCATGCTGGAAACTGGATTGCATTAATGCGATTAGGCATTTTTGT TTTTATATGCATTTTGAAAGGACTACAAACATCAATAAATAATACTAGGATTAACTGATTCCATTAACTTTGATTGGACT ATTGTCGTATGTCTTTTGGATTTTTTTTAGAGATGCTCTATATCTGTTTTCTTAGTCAGTCTATGCAGTTGCTTTTTATG GCAAGAAAGTTATGATAACTTGGCTTATTATGTTTTTTTCCCATCATGGAAAAGTAAATTGTATATACTGACCTGGTTTA GTTTAAATACTTGAGTTTACATCTCTACAGCCTTGTTAAACTCTAGAATCTTCTTAATATCTGTCTGGTTCAAGCTCTCC ATTTAATCTCTAGCAATGAAAATATGAATTATACCTAGAAAGAGTTATCAGCATTCTGTTGCATGTTTTGTCTTGCCTCC AAAATATGTCCTGCCTCAAGTCTTCTATAAATTGTTGATGGACACTCTGAATTTGACATCTGTGTTTCAAAAATTACTTT TTCAGTTTTATGAGGGATCTAGGTTTCGTTTTCTAGAAACCTAATGAACAGAGAATGGTAGATCTCCAAGTATTCAAAAT GATTTGCTTCTCGAACAATACCTCTTCATGTTCCAGTTTTTGTTTTCATGAATTATTTCTTCTTCCTCTAATTTGATGCT GAAAATTTATGGACTGAATGTGTAATTGTTCCTTCAAAGTTGTTTTGGAAGTTTTTTTTTTCTATTTCAGAGTGAAATTG AGGATCTTTAGTACACAACATATTGATATGTGTGGTATTTTTAACACCTAAAATTTGACTTAATAATTTTACACTTATCA TGAATTTATTTTTAAAAATGTGGTGCAACTCACCCTCTTATATTCATGGATGTTTTCTTTGGTTTTAGGATCCGAGAACG GAAGGAGTCTGTGACAGTGCTGTTGTGTGGCACTAGTGGCTGTGGCAAATCCACATTATCTGCATTACTGGTATTTTTAC ATAGAGAAATACTTGTTTGTTTTTCAAATATAAATATGCAGTTCTAGTTTTTACTTATTTTGTGGTAGGATACAGATGTG ATAATGAAGTTTAGTTGAGAACTTGAAATAGAGTACTATTTATAACTTGCGTGCCATTTGCATCTTCACTTCAGGGTGGC AGGCTGGGAATTACAACAGTGGTCTCAACTGATTCTATTAGACACATGATGAGAAGTTTTGCTGATGAGAAGGAGAACCC CTTGTTGTGGGCTTCTACCTACCATGCGGGCGAGTGTTTGGATCCTGTTGCTGTCGCAGAAGCTAAGGCCAGAAAGAAAG CGAAAAAACTGGCTGGTGTCTCACATTCACATCACAAGGATGAAGCAGCTGATGGAAGCAAATCTGATTTACGGACATTG GATGTGGGCTCGGGTGGTACAGAATTGCTAAGTCCGAAACAAATGGCTATTGAAGGATATAAGGCACAGAGCGAGATGGT CATTGACAGTCTTGATAGGCTAATCACTGCCTGGGAAGAAAGAAAAGAGTCAGTTGTTGTTGAGGGTGTTCACTTGAGCC TCAATTTTGTTGTAAGTCAGATTTTTATCAGTGTCTTTTACTATTTCTTTTCTAGTGAATGTCAATTTATGCTTCTCTGT TTTTCTCATCTGCTAATATCAAAACTTGAATACTGATGCAGATGGGGCTCATGAAGAAACATCCGTCTATTATACCATTC ATGATATACATTACAAATGAGGACAAGCATATGGAAAGATTTGCTGTACGAGCAAAGTATATGACCCTAGACCCAGCTAA AAACAAGTATGTAAAGTATATCCGAAACATCAGAACAATCCAGGATTATCTCTGTAAGCGTGCTGAAAAGCATTTAGTTC CCAAAATAAACAACACAAATGTTGACAAGAGTGTTGCAGCCATCCATGCAACTGTCTTCAGCTGCCTTCGAAAGCGTGAA GCTGGGGAACAACTATATGATCCTGTTAGAAATACTGTAACAGTTATTGATGAGGAATATAGAAATCAATGTGCAGCCAA TTCTGTGAGCTCCAAAGGAATGTTTCAATTGATCCAGAGAAAAGGTTCTTCCAGGAATCTGATGGCTCTAGTTAATAACG ATGGGTCTGTGGCAAAGGCGTGGCCTGTTAATCTAGTTGACAGTAATGGAAAGCCTATATTGGCTCATGGACCAGAGAAT GGAATTGGACATCCAATGTACGGTCCCTTGCGGATTGGTAAGGCAGAACCTGTAAATCTTCAGTTTGGTTTTTATGGGAT CAGTGCTTGGCCCAGTGATGGTGGCACTAGTCACGCGGGAAGTGTTGATGAGTCGAGAGCTGATGGGACTGATACCGGCA GTAGATATCTATCCTCTTGCTGTAGCTCGCCAAGGATGTCGGATTTCCCCGCAAAGGAGGTAAACTTGAACATTTTTGTA AATTTATCATCTTGTTCAACTTGTTAAATTTTAATGGTGGAAAATGTCGAATAACAAAATAAATTGACATTTGGTGAATT TTTTTCCATATATTTTCAGCTCAAGGAAGACTTCTCGGTGCATGGTAGTGATGAAGAAATCGATGATCAACCAGATGCGG GCAGTGATGAGGATTTCAGTGATGACGATCACAAACTTGACCATGAGGAGGTAGACTTCAGTTTTTATGTTAAGATGAAT GATTTACCTATCTTAAATATCTATATATGTGATAAGTTTTCCCCACTGAAGAATTTCACGTCTTCTTGGGTGCCTTGGCT TTGGTATTGTCCTTGCTAGCCTCAATGGCAAGAATTGACAATATTTGTTTTTGCTTTCCATGGCAATGGGTTAGGGTTAC CACTTCGAAATGAATTACCTATAAGCTCTATTTTGAACAGTAGTATGTAACTATTTTTAAGCTCTATTTTGAACAGTAGT ATGTAACTATTTTTGAGTCGTCTTTCATTATTTTGCAGGTAGGATCAGTTGATGAGGAATCAACAAAGTCTGATGAAGAG TATGATGATCTTGCAATGCAATGTGTTCAGGAAAATGGTTATTGGTCAGACGACGATGAGGAGTTTAAGAGCAGGCTCGC TGCTGTTGCCGGTGAAATTCATGGGAACAAGTATCGTGAAAACCTGGATCTGTTCCTCAGAACTAGAAGCGAGCCGATGA CCATGGGGGTTGCGTCTCCAGAGCCTCCTTGCTCTTATTCTTCTTTGCTCATGGAAAAGAGTGAGAGGAAACTAACACCA GCTGGCAGAGCCAAATTAAGAAAACGTTCACTTAGCATTCCTGCATTAGGAAAACATAGATCAGCAATCAATGATCCAAT CCTTTCTGGTGCTCCTCAAAGGTAG
CDS sequence (LotjaGi3g1v0487900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCGATGCCGGGAAGATACTCTACATCGTCGTTCTTGACGCTGACAAGAAGGACGATAAGGCTAAAGTCTCCTTCCG CTACACGCGTTCTGTTCTTCAAAGCACTCTCCAGCTTATGGGATGCAAAGCGAGGCATGCCTTTAAGATCAGCCAAAGAG TTTTTGAAGTCACAAGGAGCAAGAGTTCTACTGATATTTCAAAGCCTGAAGCAGTTGTGTTATCAGGCCCTGATTCGAAG AAAGATAGTAGTTATGCTGGAAGCGTACCATTTGAGCTGTACAAAAGGCGCACATCAGTATTCGTTCGCAGAGAAACTTT TCTAGACATTATCTGTGATGCTCTGGCTGAGTACAAGTATATGGGTCCCAACCAGAGAGAAGACTTGGCTCTAGCCTGCA GGATCCGAGAACGGAAGGAGTCTGTGACAGTGCTGTTGTGTGGCACTAGTGGCTGTGGCAAATCCACATTATCTGCATTA CTGGGTGGCAGGCTGGGAATTACAACAGTGGTCTCAACTGATTCTATTAGACACATGATGAGAAGTTTTGCTGATGAGAA GGAGAACCCCTTGTTGTGGGCTTCTACCTACCATGCGGGCGAGTGTTTGGATCCTGTTGCTGTCGCAGAAGCTAAGGCCA GAAAGAAAGCGAAAAAACTGGCTGGTGTCTCACATTCACATCACAAGGATGAAGCAGCTGATGGAAGCAAATCTGATTTA CGGACATTGGATGTGGGCTCGGGTGGTACAGAATTGCTAAGTCCGAAACAAATGGCTATTGAAGGATATAAGGCACAGAG CGAGATGGTCATTGACAGTCTTGATAGGCTAATCACTGCCTGGGAAGAAAGAAAAGAGTCAGTTGTTGTTGAGGGTGTTC ACTTGAGCCTCAATTTTGTTATGGGGCTCATGAAGAAACATCCGTCTATTATACCATTCATGATATACATTACAAATGAG GACAAGCATATGGAAAGATTTGCTGTACGAGCAAAGTATATGACCCTAGACCCAGCTAAAAACAAGTATGTAAAGTATAT CCGAAACATCAGAACAATCCAGGATTATCTCTGTAAGCGTGCTGAAAAGCATTTAGTTCCCAAAATAAACAACACAAATG TTGACAAGAGTGTTGCAGCCATCCATGCAACTGTCTTCAGCTGCCTTCGAAAGCGTGAAGCTGGGGAACAACTATATGAT CCTGTTAGAAATACTGTAACAGTTATTGATGAGGAATATAGAAATCAATGTGCAGCCAATTCTGTGAGCTCCAAAGGAAT GTTTCAATTGATCCAGAGAAAAGGTTCTTCCAGGAATCTGATGGCTCTAGTTAATAACGATGGGTCTGTGGCAAAGGCGT GGCCTGTTAATCTAGTTGACAGTAATGGAAAGCCTATATTGGCTCATGGACCAGAGAATGGAATTGGACATCCAATGTAC GGTCCCTTGCGGATTGGTAAGGCAGAACCTGTAAATCTTCAGTTTGGTTTTTATGGGATCAGTGCTTGGCCCAGTGATGG TGGCACTAGTCACGCGGGAAGTGTTGATGAGTCGAGAGCTGATGGGACTGATACCGGCAGTAGATATCTATCCTCTTGCT GTAGCTCGCCAAGGATGTCGGATTTCCCCGCAAAGGAGCTCAAGGAAGACTTCTCGGTGCATGGTAGTGATGAAGAAATC GATGATCAACCAGATGCGGGCAGTGATGAGGATTTCAGTGATGACGATCACAAACTTGACCATGAGGAGGTAGGATCAGT TGATGAGGAATCAACAAAGTCTGATGAAGAGTATGATGATCTTGCAATGCAATGTGTTCAGGAAAATGGTTATTGGTCAG ACGACGATGAGGAGTTTAAGAGCAGGCTCGCTGCTGTTGCCGGTGAAATTCATGGGAACAAGTATCGTGAAAACCTGGAT CTGTTCCTCAGAACTAGAAGCGAGCCGATGACCATGGGGGTTGCGTCTCCAGAGCCTCCTTGCTCTTATTCTTCTTTGCT CATGGAAAAGAGTGAGAGGAAACTAACACCAGCTGGCAGAGCCAAATTAAGAAAACGTTCACTTAGCATTCCTGCATTAG GAAAACATAGATCAGCAATCAATGATCCAATCCTTTCTGGTGCTCCTCAAAGGTAG
Protein sequence (LotjaGi3g1v0487900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDAGKILYIVVLDADKKDDKAKVSFRYTRSVLQSTLQLMGCKARHAFKISQRVFEVTRSKSSTDISKPEAVVLSGPDSK KDSSYAGSVPFELYKRRTSVFVRRETFLDIICDALAEYKYMGPNQREDLALACRIRERKESVTVLLCGTSGCGKSTLSAL LGGRLGITTVVSTDSIRHMMRSFADEKENPLLWASTYHAGECLDPVAVAEAKARKKAKKLAGVSHSHHKDEAADGSKSDL RTLDVGSGGTELLSPKQMAIEGYKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIYITNE DKHMERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRAEKHLVPKINNTNVDKSVAAIHATVFSCLRKREAGEQLYD PVRNTVTVIDEEYRNQCAANSVSSKGMFQLIQRKGSSRNLMALVNNDGSVAKAWPVNLVDSNGKPILAHGPENGIGHPMY GPLRIGKAEPVNLQFGFYGISAWPSDGGTSHAGSVDESRADGTDTGSRYLSSCCSSPRMSDFPAKELKEDFSVHGSDEEI DDQPDAGSDEDFSDDDHKLDHEEVGSVDEESTKSDEEYDDLAMQCVQENGYWSDDDEEFKSRLAAVAGEIHGNKYRENLD LFLRTRSEPMTMGVASPEPPCSYSSLLMEKSERKLTPAGRAKLRKRSLSIPALGKHRSAINDPILSGAPQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 705 | 705 | 0.0 | – | |
| PANTHER | 1 | 705 | 705 | 0.0 | – | |
| SUPERFAMILY | 143 | 391 | 249 | 1.96E-30 | ||
| MobiDBLite | 219 | 241 | 23 | - | – | |
| MobiDBLite | 224 | 238 | 15 | - | – | |
| MobiDBLite | 507 | 535 | 29 | - | – | |
| MobiDBLite | 554 | 598 | 45 | - | – | |
| MobiDBLite | 571 | 588 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0487900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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