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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0488600 |
| Transcript ID | LotjaGi3g1v0488600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | electron protein, putative (Protein of unknown function, DUF547); TAIR: AT5G60720.1 electron transporter, putative (Protein of unknown function, DUF547); Swiss-Prot: sp|F4JQZ3|REN1_ARATH Rho GTPase-activating protein REN1; TrEMBL-Plants: tr|K7LQD4|K7LQD4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0488600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90639520..90645684) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTGATTAAAGATGAACTCTTACTTAAAAGTCATGTAATTAGAAAGAAACTTAGAATGTGGAGGAACCAATAGCAGGT GATAACTGCGGCTATCTAACTCTCAAAAATCAAACCAGGATTGCAAGCTACGCCAAGAAACCAAAGTACCCACCACCACA CACCACCACCTTCATTTTCTTTTCTTTTTCTCTCTGCATGATGTCCCACTCCTACCAGCACTCACAACCACAACAGAGAC GGTTATTATCAATATCATCCCAGTGCCTGAACCAACTTCATGAAAAACCTGAAAGTGAAAGCTCCTTCTCATCCTCAACA CTTCTCCACAAAGCCCCTTCTTCTTCCTCCTCTTCCTGTCTCATTCACTCTCAAACGTCAACGCCAACAACATCAACAAC ACGACGTCGCAGCAGCCTCTGTTTCTTTGGCCCCAAGCTTGTCTCATCATCACCCTTCCATGATGAAAAACCTTACAACC CCCCAACTCCGTGTTGTTTTAATGTCTCTTCCAGGCGTTGGGGTACCTTCAAGCTTGGGTGCAGTGAAGTTTCTTCCATG GACAGCCATGTAGATCAATCCTCTTCACTTAATTCTAACTCTGTAGATCTTCTTGTAAGTCTGTTATTCATCTTAATTTT ACTCTTCTATCATATAGTGTTTTACTAATGTCGACGTCTCACATTCACTAAAAATATAGTCAAATAAATGTTTATAAAAG GTGGAAAAAAAACCCTCAATTCAACTCTAACTTTTAAAGTATAGTTAGATTATACCTGACTCATGGTGAATTGTATGTCC ATTGCCAATCCCACACTATTAGTCATGCATCATTATAAATATGTAATTTATTATATTTATTTTTATATATAAGACAATCC TTTTTTTTAAGGTTTATATAAGACAATCCTGAATCCACCAAAAGTGTGCATGACTACTAAGTGCTTAGTAACAAATATGT AAGGATGGTTTGTTTTTATTTGTTTGTTATATATGATCTCTCTTCTTATTTTGGTTGGTGAGTGAAGGGGTACTTTTGAT TATTGCATGTTTCACTTTTATTTTCTGATAAAGCAATGAATTTGTCTTTGCATTCAATTTCCCCATTCAGAGTTCAGACA ACCAAACACATGGATTGATGCTCTTTTCTAAGACATTTTTTCCTCATCTTCTTTACTTTTTTTTGCAGAGAAAAAAGAAA ATTACTGGGAGACAAAAGAAAGAGGATCTTGAAAGAGAGGTATTTTGATGGAAAATTCTTGGTATTCAAAAGCCTATTTT GAAAAGTGGGCAATTCTATGGAATGGTCCAACATGAACTGTATTTTTAGTTATTATTAAAATTTAGTACATATTATTTAC AATGCTGCTAAAATTAATTTGAAGATAAACTCCTTTAACTTGTAAACCAGATTTTTCTTGCTTGAAAAATATCTAAAATC CAATTATTGCATTCTCGTTTCCATATGATTGATGATTCAATCTAAAGATCATGTCACTACTAATCTAGAGAACTCTTGAT AGCTATTGGATTAAGTAACTTCGTGACATGTAGCGTCACGCTTAACCAAAAATTATGAAGTTACATTACTCTTTTTCACA AAATCATGGATCATAGAGCATGGCACTTTATAGTATCTAGCCAACTATATAAAAAGATGATCATCCGCGACTATAAGATG GCGGTAAAAAGTGTCACGCTCCCTTTGACAGAGCTTTAAGTGATAGTTCATGATGATATCAAAATATAGCAACACTTATT GCAAACATTGGAACTATAAACCTTGCTATTTTTGCCAACAGAGAGGGCCATCAGTGAATGAGAACCATACCCCTCAAAGC CACAGGCATTGAATTGGAAAGTTTCACATATTCATATAATAGCAGAGATTTTCACCTGTTTTGACAATTTAAGTGATAAT TGCATATTCTTTTTACGAATTTTAAGCGAAATTGTTATGAGTTGTGACATTTTTATGTTAAATACAGGTCTCTATGCTTC AAAGGTTGTTGGAGCAAGAAGAAAAGGTCCATGGGGTTCTGGAAATGGTGCATAATAGATCAAATGGTTCAGTGATATCA ATTCCTAATTTTCTTCCTCCCAAGGTAACATAATTAATGACCTCACATTTGTTATTATTTTATTGCTTTCTTTTTCTAGC TATGTTTTTTCAGTGTTTCTCACTTACCGATGGATAGTTAGTTCAAGTGGTATATGTCTGATTCTCCTTAAACTAAATTT CAAATTCAAGTCTTGTGGATGGAAAGACCTGATTGGAAAGCTATTCCCATCAAGATGTGAATCTTCCCGAATCGAACAGG ATTGAGAGTGCTCCTCACTCTTAAAATTTTATAGTGGCAAGTATTATGGGCTGATTCATGCATGTGCTTTAGAAGTGTCT AGCTATAGGGATATGGGGTCAATGTATAGAGCAAAGTCAATCCATAGCATGTAACACAAATGCATGTAGAAAGGGCTTTT AGAACCACCCTAACTGTCACTGTTATATCAGCTACTTTAAAATAAAAAATGTCCTTTAATATGTTTTCTCATCAATTAGG TCCTTCAAAATCCACAGATTCATCAATTGAGTTCTTCAAATGTTATAATTTATTTCAATTAAAGGCTGTCTAGTACTTTT AAGGTGCATAGAAGCTATATACAAAAGTATATGGAATATGCATGGAAGGTGTTCGAGAAAAGTTCAAGCTCAATTTTATA AAGTGGTTGTAGTCTGACAAACTTGAAACAGCCTGAAGAAAATTACTAACGTTAAGTATGAATTATGTGCAGATGAGAGA ACTCTTAGCCGAGCTAGTCATGGTTGAGGGTGAGATTGCGCGACTTGAGGGCCAAATAAGCCAACTTCAAGCTGGTTTGA AACATGAACAAGAAGTCACCAAGGAATCAAAGTCAAAAACATGGAATTCTGTGAATTTGAGCAATGCTAGCAATCACTTA TCAACTGCAACAATGTCAATCACAAATCCTGGTCCTATTCACAGAGGTGTTCATGAAAGGATGGCATTTGAAACCAAGGC ACTGCATTTCATAAGCAAGGCTATAAAAGGAGATTATAATCTCAATGACTTCAGTCTTAATGAGAAAACAGGACTTTTCA AGAATTCTGTAGAACATAAAGAAAAAAATTTCCAAGAAGATGTGAAATTGCATGAAAGAGTTCCAAGAAAAAATGGGATA GTAAAGCCTCCCTCACCTATGCGAGACCCCCGCCATCCATCCCCTAAGGTTTGTATGCAGGCCTATTTCCCCATTCATGC ATGAAGATTTGTTTTTCTTAACAAAAACAAAAGATTAGTTTTAGCTGCATTGCCATAGTATCACTAATGTAGAGAAAAGA AGTCTCACTTGATGCTTCATGCTAAGATCAACCTATGACTTTCAAAAAAGGAAGTCATCAAATGAAAACCAGACTAAGTT TTTCGGGTTTGACTCGCTCACCTTAGAGGGTAAAATAAAGTTCTTAGTGTTAAACTGGAATATAATTTTATCCCACTGAA TGGCATTACTTGAATCAATTGGCTCTATTTATCAAGTATAAAATAATAATGTAATGTCAAAACTTCAACAATGATCTGTA CCTTATACATGCCATAACTTGGAATATATAATGTTGTCAACAGTGTAAATTTGCTAATTTTCAATTCCTTTGCTATTTCC AGGTGAGGGAACGTAATCCAGAGATGTACTTAGATCTTCCCACTAGGTCACTACTTGATCCACTTCTGTCAGAAGAAACT GACCTAAAGTGGCAACCCAACAAACTATCTGAGAGTATCATGAAGTGTTTGAATTTCATATATGTGAGGCTATTGAGAAC ATCAAGAGCAATGGAATTGGAAAAATCAGGGCCAGTTTCCAGGTCTGTGCATTCTTCTTTAAGCTCAAGAAGCTTCAGGG TGGATACTGGATCGACCCCAAAGTCAAGCCTCATGTTGCAGAGGGAATCATCAAGGCAGCAAGATCCATATGGTATCTTC GATACAGAAGAGTCCATTCCAAGAGACATTGGTCCTTACAAGAACTTGGTTATATTCACTTCCAGCTCTATGGATCCAAA GTTCATCTCAAGTCCTTCTTCTATTCCATTACTAAGAAAATTAAGGTATGGCATGAATGATGTGTACATTTATGAGATGA AAACATTGAGAAACTTATCATTTGTTTCTTGTGATGTGCAGGATCTTGATGAGCAATCTTCAGACAGTTGATTTGAAAGG CCTTACAAACCAACAAAAATTAGCGTTCTGGATCAACGTGTACAATGCTTGTCTCATGCATGTATAGTGGAAAATTCCTT TTTTTAATTTCTATATGGTCTTGTATTAACATCACATGAGCTTTTATTTATGAATTTGATCATGATATGAATCAGAACTA TGGTTAATATATTGTCTGTTCCAGGGATTCATCCAATTTGGAGTGCCATCTACCCCAGAAAAGCAACTTGAATTGATGAA CAAGGTACTCAAAGTATTGGTATAGGTTTTACTTGTTCTGTTCCTTGATCTGGTGATAAGAGTCATAATTTAAAAGCAAA AAAATGGCACATTCTTGAAATTTAAGGTGTTTTTGGTTAAGTTTCTTTGAAAAATACTATTAATGCATAGTTTAATGGAA AAAAAAACATTTTTTTCTAAGAAAAAGCACAAAACAGACAGTCCCTAAATGTTCAATTGAATTGCTTCTGTGCAGGCAAC CCTCAATGTGGGAGGCAACATAATAAATGCTCAAGCAATAGAGCATTTCATTTTAAGGAAAAGAGATACTTCTATTATGA AAGAGGTAACTATGATAAGCAAGTTCCTTTTTGTTCTTTTAAATGCAGAAACAACTCAACTGTTTGGTTGTCCTTAATCT CTAAAACAGTGATGTCTCATTGATTAGGTACAGAGGAAGAGTCAGTGGGAGGAGAAAGAATCAGTCGTTCGTGAACTTTA TGGACTTGAATTTATTGATTCTAATGTCACATTTGCTCTATGTAGTGGAACTCGTTCTTCTCCAACTGTAAGTCCTGCTC AAACACATATCTAATGTTCATTCTTAACAAACTGTCTGTTAGCATGTTTGGCTCCACGGTGGACATGTTCTAGAATCACT TCTGGTTAGATGTTATTAGTCTTATAGCATGATTGAATTTGAATCAAATCGTGAAATCAAACATGCACAGAAAAAAGTAT TTACCTCCAATTATATGCACTTTGTGCAGGTGAGGATATACACAGGAGATGGTGTTACTGCTGAATTGGAGAAATCAAAG CTAGACTATCTTCAGGCTTCAATTCTGGCCACTAGCACAAAAAGGATAGCATTTCCAGAGCTACTCCTGAGAAACATGCT TGATTTTGCAAAGGACACTGACTCACTGGTGGAGTGGGTGTGCAACCAGTTACCTACATCATGGACTCTAAGGAAATCAA TGGTGGATTGCTTTAGAAGCCATAGTAATGTCAAGGCTTCTACCATTGTAGAAAAGATACCCTATGACTATGAATTCCAG TATTTGTTGACAATATAATAAAGATACATCTCCATGTATTTAATCCCCTATAAAACTCCGAGTATACAAAATATTCAAGG AATTTAGTTTTGGACCATCTAGGACTATCCTCTCTTCTCCAATTTATTTCCCTAAACTAACTAACTAAATTGACTTGGCT TCTAAGTCAAGTTGATTGACGGGCACTTCAAGCTTCGATTCATTGATGAGGTTGTGGTTTCCTATCAAATTAGAATTGAG TAGAGTAATACATAAAAGTGTGCATACCTTCATTGTGGTTAGTGACTGTTTTTATAAACAAATCTCGATAGTTGTTTTTC TGGATAGTTCGAGATATCCGATGACAATTATAGGAGATGAGACCCTTATCTGTTGATCCATAATGGTATTCATTGCGTTT GGACCAAGTCGCCCCAGATCATACTTGTGCGTGTGAGGACTCTAAAACTAATTTACCAAAAACACACTACTCAGATATGT GTGAAGATGTATCAACTTCTTATTTTTTGACCCAAAAGAAAAACAAATGTTGGGTACTCCGCACGAGAATTTTTTGTTTG TTTGTTAGCCCTGCTGTTTAGACACTTCCTGTTGTGCCTGTTTCTTTGGGCTTCAGCCCATCTACTTTAATGAATGAGGC TTTTT
CDS sequence (LotjaGi3g1v0488600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTCCCACTCCTACCAGCACTCACAACCACAACAGAGACGGTTATTATCAATATCATCCCAGTGCCTGAACCAACT TCATGAAAAACCTGAAAGTGAAAGCTCCTTCTCATCCTCAACACTTCTCCACAAAGCCCCTTCTTCTTCCTCCTCTTCCT GTCTCATTCACTCTCAAACGTCAACGCCAACAACATCAACAACACGACGTCGCAGCAGCCTCTGTTTCTTTGGCCCCAAG CTTGTCTCATCATCACCCTTCCATGATGAAAAACCTTACAACCCCCCAACTCCGTGTTGTTTTAATGTCTCTTCCAGGCG TTGGGGTACCTTCAAGCTTGGGTGCAGTGAAGTTTCTTCCATGGACAGCCATGTAGATCAATCCTCTTCACTTAATTCTA ACTCTGTAGATCTTCTTAGAAAAAAGAAAATTACTGGGAGACAAAAGAAAGAGGATCTTGAAAGAGAGGTCTCTATGCTT CAAAGGTTGTTGGAGCAAGAAGAAAAGGTCCATGGGGTTCTGGAAATGGTGCATAATAGATCAAATGGTTCAGTGATATC AATTCCTAATTTTCTTCCTCCCAAGATGAGAGAACTCTTAGCCGAGCTAGTCATGGTTGAGGGTGAGATTGCGCGACTTG AGGGCCAAATAAGCCAACTTCAAGCTGGTTTGAAACATGAACAAGAAGTCACCAAGGAATCAAAGTCAAAAACATGGAAT TCTGTGAATTTGAGCAATGCTAGCAATCACTTATCAACTGCAACAATGTCAATCACAAATCCTGGTCCTATTCACAGAGG TGTTCATGAAAGGATGGCATTTGAAACCAAGGCACTGCATTTCATAAGCAAGGCTATAAAAGGAGATTATAATCTCAATG ACTTCAGTCTTAATGAGAAAACAGGACTTTTCAAGAATTCTGTAGAACATAAAGAAAAAAATTTCCAAGAAGATGTGAAA TTGCATGAAAGAGTTCCAAGAAAAAATGGGATAGTAAAGCCTCCCTCACCTATGCGAGACCCCCGCCATCCATCCCCTAA GGTGAGGGAACGTAATCCAGAGATGTACTTAGATCTTCCCACTAGGTCACTACTTGATCCACTTCTGTCAGAAGAAACTG ACCTAAAGTGGCAACCCAACAAACTATCTGAGAGTATCATGAAGTGTTTGAATTTCATATATGTGAGGCTATTGAGAACA TCAAGAGCAATGGAATTGGAAAAATCAGGGCCAGTTTCCAGGTCTGTGCATTCTTCTTTAAGCTCAAGAAGCTTCAGGGT GGATACTGGATCGACCCCAAAGTCAAGCCTCATGTTGCAGAGGGAATCATCAAGGCAGCAAGATCCATATGGTATCTTCG ATACAGAAGAGTCCATTCCAAGAGACATTGGTCCTTACAAGAACTTGGTTATATTCACTTCCAGCTCTATGGATCCAAAG TTCATCTCAAGTCCTTCTTCTATTCCATTACTAAGAAAATTAAGGATCTTGATGAGCAATCTTCAGACAGTTGATTTGAA AGGCCTTACAAACCAACAAAAATTAGCGTTCTGGATCAACGTGTACAATGCTTGTCTCATGCATGGATTCATCCAATTTG GAGTGCCATCTACCCCAGAAAAGCAACTTGAATTGATGAACAAGGCAACCCTCAATGTGGGAGGCAACATAATAAATGCT CAAGCAATAGAGCATTTCATTTTAAGGAAAAGAGATACTTCTATTATGAAAGAGGTACAGAGGAAGAGTCAGTGGGAGGA GAAAGAATCAGTCGTTCGTGAACTTTATGGACTTGAATTTATTGATTCTAATGTCACATTTGCTCTATGTAGTGGAACTC GTTCTTCTCCAACTGTGAGGATATACACAGGAGATGGTGTTACTGCTGAATTGGAGAAATCAAAGCTAGACTATCTTCAG GCTTCAATTCTGGCCACTAGCACAAAAAGGATAGCATTTCCAGAGCTACTCCTGAGAAACATGCTTGATTTTGCAAAGGA CACTGACTCACTGGTGGAGTGGGTGTGCAACCAGTTACCTACATCATGGACTCTAAGGAAATCAATGGTGGATTGCTTTA GAAGCCATAGTAATGTCAAGGCTTCTACCATTGTAGAAAAGATACCCTATGACTATGAATTCCAGTATTTGTTGACAATA TAA
Protein sequence (LotjaGi3g1v0488600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMSHSYQHSQPQQRRLLSISSQCLNQLHEKPESESSFSSSTLLHKAPSSSSSSCLIHSQTSTPTTSTTRRRSSLCFFGPK LVSSSPFHDEKPYNPPTPCCFNVSSRRWGTFKLGCSEVSSMDSHVDQSSSLNSNSVDLLRKKKITGRQKKEDLEREVSML QRLLEQEEKVHGVLEMVHNRSNGSVISIPNFLPPKMRELLAELVMVEGEIARLEGQISQLQAGLKHEQEVTKESKSKTWN SVNLSNASNHLSTATMSITNPGPIHRGVHERMAFETKALHFISKAIKGDYNLNDFSLNEKTGLFKNSVEHKEKNFQEDVK LHERVPRKNGIVKPPSPMRDPRHPSPKVRERNPEMYLDLPTRSLLDPLLSEETDLKWQPNKLSESIMKCLNFIYVRLLRT SRAMELEKSGPVSRSVHSSLSSRSFRVDTGSTPKSSLMLQRESSRQQDPYGIFDTEESIPRDIGPYKNLVIFTSSSMDPK FISSPSSIPLLRKLRILMSNLQTVDLKGLTNQQKLAFWINVYNACLMHGFIQFGVPSTPEKQLELMNKATLNVGGNIINA QAIEHFILRKRDTSIMKEVQRKSQWEEKESVVRELYGLEFIDSNVTFALCSGTRSSPTVRIYTGDGVTAELEKSKLDYLQ ASILATSTKRIAFPELLLRNMLDFAKDTDSLVEWVCNQLPTSWTLRKSMVDCFRSHSNVKASTIVEKIPYDYEFQYLLTI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 32 | 69 | 38 | - | – | |
| Coils | 136 | 170 | 35 | - | – | |
| PANTHER | 138 | 720 | 583 | 4.5E-273 | – | |
| PANTHER | 138 | 720 | 583 | 4.5E-273 | – | |
| Pfam | 146 | 227 | 82 | 1.6E-21 | ||
| Coils | 196 | 230 | 35 | - | – | |
| MobiDBLite | 328 | 350 | 23 | - | – | |
| MobiDBLite | 407 | 441 | 35 | - | – | |
| MobiDBLite | 412 | 441 | 30 | - | – | |
| Pfam | 507 | 639 | 133 | 3.5E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0488600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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