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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0492100 |
| Transcript ID | LotjaGi3g1v0492100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dicarboxylate transporter 2.1, chloroplastic; TAIR: AT5G12860.1 dicarboxylate transporter 1; Swiss-Prot: sp|Q9LXV3|DIT1_ARATH Dicarboxylate transporter 1, chloroplastic; TrEMBL-Plants: tr|I1LJW4|I1LJW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0492100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:90979444..90983673) extracted from Lotus japonicus Gifu genome v1.2.
CTTGGTCACTTCCATGCTCCTGTTGAGTTGGTGAGGTTTTTGGATCTCTTGATCTCTTCCCTCTTCACACACACTCATGT GACGGAAATCCCAAATTGTCAAAACTCGAGCGAGAATCACAAAGCCTACAATATTAACCTCACCATTCTCATCACAACCT CCACCGTCCATTCCTAATCCAACGGCCCACATCCAAAATCTCCCTCACTCACATCATGCCACTCCATTATTATTAACCTC CCCACCCTCACTCTCCTACACCAGATCGCGCCACCCTCCACCATGGCTTCCATAGCATTCTCCACCGCCACCCTCCCCTC CCTCCGCCTCCGCCACCGCTACCGCCACTCCCCCAAACCGCCACTCCTCCGCCACTCCCTCAAACTAAAACCCTCCCTCC CTTCCATTTCTTCAACGTTCCCACTCTCCACCCTCTCTTCCGTTCCCAGAAAACACACCACTCTCACTGTCAGAGCCTCT TCCTCCTCCTCAGCTTCCATAACCCCAGCTCCGGTTCCCGCTCCGCCTCCGGTTCAACCATGGCAAGGTGCCGCCATCAA ACCCCTCTTCGCTTCCTTAGCGATCGGTACTCTACTCTGGTACTCTCCCGTGCCAGACGGAGTCTCTCGTAACGCGTGGC AATTGCTCGCGATTTTCTTAGGAACCATCGTCGGCATCATCACGCAGCCACTGCCACTCGGCGCCGTCGCGATTTTGGGC TTAGGAGTCTCCGTTCTCACCAAAACCCTCACGTTCGCCGCCGCTTTCTCCGGCTTCGGCGACCCAATTCCCTGGCTTAT CTGCCTCGCTTTCTTCTTCGCCAAAGGGTTCATCAAAACCGGCCTCGGCAACCGCGTTGCGTATCAATTCGTGTCACTCT TCGGTAGCTCGTCGTTGGGGTTGGGGTACAGTTTGGTTTTCAGCGAGGCCCTTTTGGCGCCGGCGATTCCTTCCGTTTCG GCGAGGTCCGGTGGGATTTTCCTTCCGCTGGTGAAGGCTTTGTGTGTGTCGTGTGGGAGTAACGTCGGTGATGGAACGGA GAACAGGTTGGGGTCGTGGTTGATGCTGACTTGCTTTCAGACATCGGTGATCTCGTCGGCGATGTTTCTGACGGGAATGG CGGCGAATCCGCTGTGCGCCACGCTTACTTTGAACTCCATAAACCAGACAATTGGGTGGTTGGATTGGGCTAAGGCTGCT ATAGTGCCTGGTTTGGCGTCGTTGATTTTGGTGCCTTTGATCTTGTATGTTATCTACCCTCCTACCCTGAAATCTAGTCC AGATGCACCCAAGCTTGCTAGGGAGAAGTTGCAGAAAATGGGGCCTATGACAACCAATGAGAAGATCATGACTGTTACTC TGCTTCTAACGGTAATCAATTTGCAAATTTAGCTGTATTAGATATTCTATGGGGATTGTAGAGTATATATGCAATAGGTT AACTCTGATGAATTGATTTCTGAAGTTCTTAGCTTGTTAATCATTTGTAGTCATAAGTAGCTTGGCATTTCTAATATAGG TTTGAAATTGAAAGTATGATTGCAAATTAATGTTCGTCGTAAATAATATTACGGTTTGATTTCTAATCTGTTCTACTGGG TTTTCTGTCCTTTGTTGATTTGAGCACCCGATTTGCACTGATAGGCTGATCATCGGACAAATGTGCATTGTGCTTTTGCT GTTTGGCTTCGTAAACTGTGAAGAATCAGACATAATAGTCATGCCCTCTTTAAATTTTGTTAGCTAAATTAAGTTGCTGA GTCTTTTTACGGTCTGCACCCAATTTGCACTGCTAGGATGATCATAGGACAAATGTGCATTGTGCTTTTTCTGTTTGGCT TAGTAAACTTTGAAGAGTCAGACATAATAGTCATGCTCTCTTTAAATTCTGTTAGCTAAATTAAGTTACTGAGTCTTTTT ACTGTCTGCAAAACTAATCACTTATTAGTAGTTAATGTTTTACAATATACATTGTCAGTCCTAATAAGGTGAAGATGAAT GTATATGTGGTGCTTTGGACGCCTTAGAATCTTTAATTTGCTTAGTAACTTATTCCCTCTCTTGCTCTATTTTACCAGGT TGGACTTTGGATTTTTGGAGGGCTTCTTGGTATAGATGCTGTAACTTCTGCCATTCTCGGATTAGCTGTACTCCTTATCA CAGGGGTTGTAACATGGAAGGAGTGCTTAGGCGAGGGAGTTGCCTGGGACACTCTCACGTGGTTTGCTGCCCTCATTGCA ATGGCTGGGTATTTGAACAAATATGGTCTTATTTCTTGGTTCAGTCAAACTGTAGTCAAGGTATTTTTCTGTCTCCTCTC TACTCCCTCATCACTCTGGTAGCTAATATTCATTTAAAATAATTATGCTGTTCCTGATAATTGATCTTCTGTTTGTTTGC CTTTCACCTGTTCTCTGGAGTAAAATAGTGAACGTATGGTTTTTTGTTTAGTTTTGTTGCATCGATGTCATGTTGTTCTA GTTGTTTGGCCAAATCAACCACACACGGGAACCTTTTCCGGATTTGAAATATTCTGAAGCTAAATAAGCATTCGAGTAAA ACGAACTGAATATGAATATTTGACATACTGGTCTCCAGAATGTCATGTTTTGTCAGCTTTTGCTTGTGCATTCTCTCGGA ATACAGTTTTCATTATGTGTCAATGTGTCATGTTTCACTTCTGTGCTTGTTCTTTATTCTGAGTTTATCAACAGCATGTT CATGGTCAAAGCATGTAATGAACCAAAGTTCCCTTCCTCCATATGTATATGTGGATATGTTTGGTTTTTAAATTTGTCAC CCACTTGAGGTCCTTTTATTCAAGGCATTTTAGAAACAATGAAGGATATCAAATGGGTCATTATAAGTTCTGAGTCCGAT AAGTGCTGTTGAATGCCACTGAAGACATGCTTTTAAATTATAATTAAGTTTACATGCATATATATAATTTTACTATCATT ATCTTCCAGAGAATATGCATTATGCAACATGTTTTGTGTTTATGAAATTTCACTTTTATCAGAATAAATTATCACATTCC TTTATTATTTTAATGAAACAATTGGCTGATGTTATTATACAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTT CGGTATTCTGGTCCTTCTCTATTTCTACTCCCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTCACTG CATTTTTGTCTGTTGCTACTGCTCTGGGGACTCCGCCATATTTGGGAGCCATTGTGCTGTCCGTCCTCTCCAACCTTATG GGTGGCCTTACTCATTATGGGATCGGGTCAGCGCCGGTGTTTTTCGGTGCCAACTATGTTCCCCTCGCTCAGTGGTGGGG GTATGGATTCATTATTAGTATTGTTAACCTTATAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAATTCATTGGCTTGT GGTAAAGGGTATTCTACTGCAATAGAAATTTGCCGGCATATTTATCAAATTTTTCATTTTGAATACATTGATGTACGAAA TCTGGTTAATATCAGCAGTTGAAGCTAATTGCTATTTTTTCCCTGATGCTTTCCTGAAATAATCTTCGGGAGATTTTGAT TCAGATTTAGGTGGAACCTGGATACAGTAGATCGTTTTAGATCTGAGGTAGAACATTTACATTGTTATTGAGATGTAAGG GGACGTCCTGGTATTCAGGATATATTGTAATTGTATGCCTATTATTAAGTTTTTCCTTAAAAAAATTCTTAGAATAAGTG TTGTGTTAATTTTGTGTGGGATGGCAATCATTCCTGTGGCTGGAAAATTTGATAGATGATTAATCATAAACTTTTAGCAA ATTCATTTGGTATGCCTCTGTTCTGATTGAGTGAATGCTCCGCACTTTTCAGAAGTAAAAACGTGTGCATTGTTTGTGGC AACAGCTGGTGTTGAGGCTTTGTGACTAGATTAATGATAAAGTATTTTCAGTTTGTTACTTGTTTGATTATGGTCCAGGA CTTGCATGTAGGTTCATAATAACCTTCTCTTCTTGTTTTGTTTCATGTTTTAATCCAATGTATTGAATGTTAGAAAGTAG GGTATGATAATCCTGGATAACTTCGAAGAATCGTGTTGTACACTTTCCGAACAAAGTATTTCGACCCTATTCTTGCCTGG GTTCACGAAATCTTTGTTGGGATAATTCTGAAGATCAATCTGCTTCAGGCAAATGAAGAACAGATCAAGA
CDS sequence (LotjaGi3g1v0492100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCATAGCATTCTCCACCGCCACCCTCCCCTCCCTCCGCCTCCGCCACCGCTACCGCCACTCCCCCAAACCGCC ACTCCTCCGCCACTCCCTCAAACTAAAACCCTCCCTCCCTTCCATTTCTTCAACGTTCCCACTCTCCACCCTCTCTTCCG TTCCCAGAAAACACACCACTCTCACTGTCAGAGCCTCTTCCTCCTCCTCAGCTTCCATAACCCCAGCTCCGGTTCCCGCT CCGCCTCCGGTTCAACCATGGCAAGGTGCCGCCATCAAACCCCTCTTCGCTTCCTTAGCGATCGGTACTCTACTCTGGTA CTCTCCCGTGCCAGACGGAGTCTCTCGTAACGCGTGGCAATTGCTCGCGATTTTCTTAGGAACCATCGTCGGCATCATCA CGCAGCCACTGCCACTCGGCGCCGTCGCGATTTTGGGCTTAGGAGTCTCCGTTCTCACCAAAACCCTCACGTTCGCCGCC GCTTTCTCCGGCTTCGGCGACCCAATTCCCTGGCTTATCTGCCTCGCTTTCTTCTTCGCCAAAGGGTTCATCAAAACCGG CCTCGGCAACCGCGTTGCGTATCAATTCGTGTCACTCTTCGGTAGCTCGTCGTTGGGGTTGGGGTACAGTTTGGTTTTCA GCGAGGCCCTTTTGGCGCCGGCGATTCCTTCCGTTTCGGCGAGGTCCGGTGGGATTTTCCTTCCGCTGGTGAAGGCTTTG TGTGTGTCGTGTGGGAGTAACGTCGGTGATGGAACGGAGAACAGGTTGGGGTCGTGGTTGATGCTGACTTGCTTTCAGAC ATCGGTGATCTCGTCGGCGATGTTTCTGACGGGAATGGCGGCGAATCCGCTGTGCGCCACGCTTACTTTGAACTCCATAA ACCAGACAATTGGGTGGTTGGATTGGGCTAAGGCTGCTATAGTGCCTGGTTTGGCGTCGTTGATTTTGGTGCCTTTGATC TTGTATGTTATCTACCCTCCTACCCTGAAATCTAGTCCAGATGCACCCAAGCTTGCTAGGGAGAAGTTGCAGAAAATGGG GCCTATGACAACCAATGAGAAGATCATGACTGTTACTCTGCTTCTAACGGTTGGACTTTGGATTTTTGGAGGGCTTCTTG GTATAGATGCTGTAACTTCTGCCATTCTCGGATTAGCTGTACTCCTTATCACAGGGGTTGTAACATGGAAGGAGTGCTTA GGCGAGGGAGTTGCCTGGGACACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCT TATTTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTTCGGTATTCTGG TCCTTCTCTATTTCTACTCCCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTCACTGCATTTTTGTCT GTTGCTACTGCTCTGGGGACTCCGCCATATTTGGGAGCCATTGTGCTGTCCGTCCTCTCCAACCTTATGGGTGGCCTTAC TCATTATGGGATCGGGTCAGCGCCGGTGTTTTTCGGTGCCAACTATGTTCCCCTCGCTCAGTGGTGGGGGTATGGATTCA TTATTAGTATTGTTAACCTTATAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAATTCATTGGCTTGTGGTAA
Protein sequence (LotjaGi3g1v0492100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASIAFSTATLPSLRLRHRYRHSPKPPLLRHSLKLKPSLPSISSTFPLSTLSSVPRKHTTLTVRASSSSSASITPAPVPA PPPVQPWQGAAIKPLFASLAIGTLLWYSPVPDGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAA AFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARSGGIFLPLVKAL CVSCGSNVGDGTENRLGSWLMLTCFQTSVISSAMFLTGMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLASLILVPLI LYVIYPPTLKSSPDAPKLAREKLQKMGPMTTNEKIMTVTLLLTVGLWIFGGLLGIDAVTSAILGLAVLLITGVVTWKECL GEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLS VATALGTPPYLGAIVLSVLSNLMGGLTHYGIGSAPVFFGANYVPLAQWWGYGFIISIVNLIIWLGLGGVWWKFIGLW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 86 | 86 | - | – | |
| PANTHER | 67 | 557 | 491 | 5.5E-249 | – | |
| PANTHER | 67 | 557 | 491 | 5.5E-249 | ||
| Phobius | 87 | 107 | 21 | - | – | |
| Pfam | 94 | 557 | 464 | 3.7E-137 | ||
| Phobius | 108 | 118 | 11 | - | – | |
| TIGRFAM | 109 | 551 | 443 | 4.8E-146 | ||
| Phobius | 119 | 152 | 34 | - | – | |
| TMHMM | 121 | 143 | 23 | - | – | |
| CDD | 129 | 551 | 423 | 1.05077E-33 | – | |
| Phobius | 153 | 157 | 5 | - | – | |
| TMHMM | 158 | 180 | 23 | - | – | |
| Phobius | 158 | 180 | 23 | - | – | |
| Phobius | 181 | 191 | 11 | - | – | |
| Phobius | 192 | 212 | 21 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Phobius | 213 | 258 | 46 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 259 | 281 | 23 | - | – | |
| Phobius | 282 | 301 | 20 | - | – | |
| TMHMM | 302 | 324 | 23 | - | – | |
| Phobius | 302 | 325 | 24 | - | – | |
| Phobius | 326 | 354 | 29 | - | – | |
| TMHMM | 355 | 375 | 21 | - | – | |
| Phobius | 355 | 373 | 19 | - | – | |
| Phobius | 374 | 379 | 6 | - | – | |
| TMHMM | 377 | 394 | 18 | - | – | |
| Phobius | 380 | 397 | 18 | - | – | |
| Phobius | 398 | 402 | 5 | - | – | |
| Phobius | 403 | 422 | 20 | - | – | |
| TMHMM | 409 | 431 | 23 | - | – | |
| Phobius | 423 | 433 | 11 | - | – | |
| Phobius | 434 | 456 | 23 | - | – | |
| TMHMM | 438 | 460 | 23 | - | – | |
| Phobius | 457 | 461 | 5 | - | – | |
| Phobius | 462 | 483 | 22 | - | – | |
| TMHMM | 464 | 486 | 23 | - | – | |
| Phobius | 484 | 489 | 6 | - | – | |
| Phobius | 490 | 511 | 22 | - | – | |
| TMHMM | 491 | 513 | 23 | - | – | |
| Phobius | 512 | 530 | 19 | - | – | |
| TMHMM | 528 | 550 | 23 | - | – | |
| Phobius | 531 | 551 | 21 | - | – | |
| Phobius | 552 | 557 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0492100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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