Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0497300 |
| Transcript ID | LotjaGi3g1v0497300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase; TAIR: AT2G44480.1 beta glucosidase 17; Swiss-Prot: sp|B8AVF0|BGL12_ORYSI Beta-glucosidase 12; TrEMBL-Plants: tr|A0A072UVY4|A0A072UVY4_MEDTR Glycoside hydrolase family 1 protein; Found in the gene: LotjaGi3g1v0497300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:91574702..91579053) extracted from Lotus japonicus Gifu genome v1.2.
AATTAAGCTGAATCATCCTTAAAAAGCGAAAAGAGGAAACATGTACCAGATTAACATGGCATCATCATGCAAACGCTTTT ACCTTTTAGGACTCGTTGCCTTCGTTCTTGTGATTACCAACTCGAATATTGTTCATTGCACTGAAAATGCTGCTCCCGTT CTTGATCTTGCTTCTTTCAACCGAAACAGTTTCCCTCCCGGCTTCATCTTTGGAGCTGGATCCTCCTCATACCAAGTATA TTCTTAGTGCATGTTTGAATTTTCGTTAAATTCAATATTCAATAATTTGTAGTAAGATAAAAATGTTTGCTTGCTTTGGA TGTATGTTTTCCAAACTAGTACTTAATTAACTTCTTAATTAAGCTACTACTAATATATACTTCGTTCATTTGGGAATAAC TGCTTACAAAAAGAGAAGAAACACACATGTTAATAAATAAATAAATATAATGAATTTTAAAAGATATTATTTATTTTCAT ATTTTACATTTTAAAGTGTGTTTTTATCTATTCTCATAATTAGAGCATTATGTGAAAAAAACATTTATTAATTAATGCTC TATTAGAATTTTTAGGGAATAATTATTATAAAAACAATTTTTTTTCTCTAAACAACAGTTATTATGATATTGATTATGTT ATGTTGGGTATAGTTTGAAGGTGGTGCAATGGATGGTGGTAGAGGGCCAAGTATATGGGATACCTTCACCCATAAATATC CAGGTCTCTCAGTCTGAAATTTTCATGTCCTTATTATTTGGTGTTTATTTCTCTGTTCCCTCCCATTAATTAAAAATACA AAGTATATCTTTATATCTTCACAAACATAATATTGACAATGTGCATATCTTGTATTGACCATATGCAGAAAAGATAGAGG ATAGAAGCAATGGAGATGTGGCCATTGACACATATCACAATTACAAGGTTTTACTATTGCGGCTTGCAAGAGCCCGACTC TTTCAAAGTATTTGTTTCTTCTTATTAATTAGCTGCATGCATAATGTATTTGGAGAATGCTAAATATATTTAGGTCCTTA TATATTACAGGAAGATGTTAAGATGATGAAAGATATGAACTTAGATTCATACAGATTCTCCATATCTTGGTCAAGAATAT TGCCGAGTAAGTCAAATAATGCTGATCGATCATTGACTATTGTTCTCAATTAAATTTCACAGTGTTGGATGGTTAGCATA ATTTAATTACCCATTCCAAATCAAAATTTTTTGTAAAATATTTATCCACAACAGAAGGAAAGCTAAGTGGAGGTATAAAT CAAGAAGGAATCAACTATTACAACAATTTCATCAACGAGCTATTGGCTAATGGTCAGATTCACAAACTCAATTGATTCAA CTTAAATTTTTTATATTATACTTTGATCGACTTGATGATCTTGTCATATTTTTTTTCTTCTTTCAGATACTATATATGAG TAGTACTAATTGATTAATTAAACATTAAAAACATATTAATTTCAGGTCTAGAACCATTTGTGACCCTTTTCCATTGGGAT CTTCCGCAAGCTTTAGAAGATGAGTATGGTGGCTTCTTAAGCCCTCTCATAGTGTGAGTTTTTATTAATCCAAAATAGAC CTTATTCGTGCTGTTTGGTTTGACTTAGCTATCAACACAAACGAGAAAATACACATCCGAAAGTATTAATAGAGAAGCAA GATTTTGCTACAATTAATTCAAATGTTGATCGACATTTAGTTCAACGTCAAACCAAACGCAAACATTCCTTAACAAATTG TTTAACACTTGATTGTTAATTTTTCAGAAAAGATTTTCGAGACTATGTGGAGCTTTGCTTCAAGGAATTTGGCGATAGGG TGAAGCTTTGGGTTACTTTGAATGAGCCATGGGGTTATAGCCAAAATGGCTACGCAGTGGGGAGGTTTGCACCAGGTCGT TGTTCTGCATGGATGAACACAAATTGCACTGGTGGTGATTCATCCATAGAACCTTATTTGGTTTCACACTACCAACTTCT TGCTCATGCAGCAGCTGTTCGTGTATACAAGACCAAATATCAGGTTTGTAACTTTCACAAAATCTCTGACCTTATGTTGA AACTCAGATTCATTTATTAGAATAACGAGGGTAATAAAGCTCGAGCATTTTATACCTCTTGATCATAAGGACTTAAAGAA CTTTGGTGTCATGTCATGAATCAACTGTCTCACAAAAGATCATGAATGGTTTCATGTTATATTTCTAACTATTTTGATGT GCTCGTGGGTTCGTGTGGGTCCAAGAATTAGGAAAAGAAATTAAGGATAATTGTTGTTTTACAATTTTTTGTAAAAATAA AAAAGTCAATAGTAAACTAAAATATTAAAACATTGCTCATATATATGCAGGCATCTCAGAAGGGTTTCATAGGCATAACC TTGGTATCTCATTGGTACCTACCTCTCTCCGACACCAGATATGATCAAAAGGCTGCTGAAAGAGCAATGGACTTCATGTA TGGATGGTAAGAGCTCATATATCTCTCTCTCTGAATTTTGATTCATCTTCAAAATACACATGCAAATATAAGAAGAAAAA AATTGAGATATTGAATATGGGATAGAAATGAAAGAACTATACCGTAATGTTAGGATCCATGCATGATCATTGGTTTTTCA AAGGAATATAGGCATAAATTTCTCCTTTTAGTAAGGCCTTAAATAGTTGGGTCATGGCTTCCATATTACTATTAAGAGTA AGTCTAGAAATCTTTCAGCAGTTGATTCTAAATGAAGAATCGAGTCTGGAGAGATGCTTATGTTGGTAGCTTCTGGATTT CAGAATTGATTATGAGAAAAGGAAATTGATCCAAACATGCTATAAGACTTTAATAATGGAAACTATCTAATTTTTGCGAT AAGGATTTATGAGTTTTTGGACAAAATTTTGAATTGAATCAATTGATTTCTTCAGGTTTATGGATCCACTAACATCCGGA GAGTACCCCAAAAGCATGAGACTTCTTGTTGGAGCACGATTACCAAAGTTCACAGCAGAGCAAGCTAGGCTACTTAAAGG TTCATATGATTTTATTGGCCTGAACTATTACACTTCACTCTATGCCACAGATGCACCTCAACTAAGAAATGCCAAACCTA GCTACGTAACAGATTCATTGGTCAATCCTGCATGTAAGGAACCAATCCCTTGCTCTTCAATGAGCTCTCTAAAATGCTTA TATATATATATGTTGAATTTCATCATTGCTGATAATTAACAACTTGTATTTTGTATTCATAATTAATTGCAGTTGAGCGT GATGGCAAACCCATAGGTATTAAGGTACGTGCATTGCCACCTAAACTTGAAATTAACCACTTAACAAGTTTAATCCATTC GAAAAAATTATAAAACAAACCCTCTTTCAATAATTATCCAGGTTGCTTCTGATTGGTTATACGTTTATCCAAGAGGAATC GAAGATCTTTTGTTATACACCAAGGAAAAGTACAACAACCCTTTGATTTACATCACTGAAAATGGTATAAGAGTAAACAC CTATATGTATATCATGTTTAGTTTCCTTGAATGTGATAACATTGATTACACACCAAATCCTCTTTTCCAATTTAGTGTTC TCTCTTCCTAGTCTCACCAATTAAATCATGGCATGCCACAAATTTATTGGTCAGGGATAGAATGGAACACTAAATCGAAA CAGAGGATCTTCCTCATTAGTGTATGAGATTTTGTTAACCTTTTGTATTAAAGGTTTATGACAACTTGCAACTTAACTTG TAGGTATAAATGAATATGATGATCCAACACTATCAGTTGAGGAATCGCTCATGGATATTTTTCGAATTGATTACCATTAT CGTCATCTCTTTTATCTTCGATGTGCAATTAGGTAGGTAGTCATTTACATTTATAACAGCTTGTTGTATTTTTTCTATCA TACAATGCAACACATTTCGATATGTTTCGTTTTAATTATATATGACAGGAATGGTGTGAATGTCAAAGGGTATTATATAT GGTCTTTGTTCGACAACTTTGAGTGGTCTTCTGGTTACACTGCACGATTTGGAATGACCTTTGTGGATTACAAAAATGGC TTGAAAAGATATGAGAAACTTTCTGCATTGTGGTTCAAGGACTTCCTCAAAGAAGAAACTAGACTTTATGCTGAATAATA TGATATTCATTAAGCATTGAAAGTTATACTTGCTAGTAAATTATTATTTTTAATTATTTTTTAAAAGGTCTTATTCGACC TGATATGGAATAAAAAGTGGATGTGCAGATGCATATTGATGTATTTGATAGATATTGATTCTACCTATGTAAATAAAAAA AGTTAAATTTACATGTTTATTTTCCCAAATCA
CDS sequence (LotjaGi3g1v0497300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACCAGATTAACATGGCATCATCATGCAAACGCTTTTACCTTTTAGGACTCGTTGCCTTCGTTCTTGTGATTACCAA CTCGAATATTGTTCATTGCACTGAAAATGCTGCTCCCGTTCTTGATCTTGCTTCTTTCAACCGAAACAGTTTCCCTCCCG GCTTCATCTTTGGAGCTGGATCCTCCTCATACCAATTTGAAGGTGGTGCAATGGATGGTGGTAGAGGGCCAAGTATATGG GATACCTTCACCCATAAATATCCAGAAAAGATAGAGGATAGAAGCAATGGAGATGTGGCCATTGACACATATCACAATTA CAAGGAAGATGTTAAGATGATGAAAGATATGAACTTAGATTCATACAGATTCTCCATATCTTGGTCAAGAATATTGCCGA AAGGAAAGCTAAGTGGAGGTATAAATCAAGAAGGAATCAACTATTACAACAATTTCATCAACGAGCTATTGGCTAATGGT CTAGAACCATTTGTGACCCTTTTCCATTGGGATCTTCCGCAAGCTTTAGAAGATGAGTATGGTGGCTTCTTAAGCCCTCT CATAGTAAAAGATTTTCGAGACTATGTGGAGCTTTGCTTCAAGGAATTTGGCGATAGGGTGAAGCTTTGGGTTACTTTGA ATGAGCCATGGGGTTATAGCCAAAATGGCTACGCAGTGGGGAGGTTTGCACCAGGTCGTTGTTCTGCATGGATGAACACA AATTGCACTGGTGGTGATTCATCCATAGAACCTTATTTGGTTTCACACTACCAACTTCTTGCTCATGCAGCAGCTGTTCG TGTATACAAGACCAAATATCAGGCATCTCAGAAGGGTTTCATAGGCATAACCTTGGTATCTCATTGGTACCTACCTCTCT CCGACACCAGATATGATCAAAAGGCTGCTGAAAGAGCAATGGACTTCATGTATGGATGGTTTATGGATCCACTAACATCC GGAGAGTACCCCAAAAGCATGAGACTTCTTGTTGGAGCACGATTACCAAAGTTCACAGCAGAGCAAGCTAGGCTACTTAA AGGTTCATATGATTTTATTGGCCTGAACTATTACACTTCACTCTATGCCACAGATGCACCTCAACTAAGAAATGCCAAAC CTAGCTACGTAACAGATTCATTGGTCAATCCTGCATTTGAGCGTGATGGCAAACCCATAGGTATTAAGGTTGCTTCTGAT TGGTTATACGTTTATCCAAGAGGAATCGAAGATCTTTTGTTATACACCAAGGAAAAGTACAACAACCCTTTGATTTACAT CACTGAAAATGGTATAAATGAATATGATGATCCAACACTATCAGTTGAGGAATCGCTCATGGATATTTTTCGAATTGATT ACCATTATCGTCATCTCTTTTATCTTCGATGTGCAATTAGGAATGGTGTGAATGTCAAAGGGTATTATATATGGTCTTTG TTCGACAACTTTGAGTGGTCTTCTGGTTACACTGCACGATTTGGAATGACCTTTGTGGATTACAAAAATGGCTTGAAAAG ATATGAGAAACTTTCTGCATTGTGGTTCAAGGACTTCCTCAAAGAAGAAACTAGACTTTATGCTGAATAA
Protein sequence (LotjaGi3g1v0497300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYQINMASSCKRFYLLGLVAFVLVITNSNIVHCTENAAPVLDLASFNRNSFPPGFIFGAGSSSYQFEGGAMDGGRGPSIW DTFTHKYPEKIEDRSNGDVAIDTYHNYKEDVKMMKDMNLDSYRFSISWSRILPKGKLSGGINQEGINYYNNFINELLANG LEPFVTLFHWDLPQALEDEYGGFLSPLIVKDFRDYVELCFKEFGDRVKLWVTLNEPWGYSQNGYAVGRFAPGRCSAWMNT NCTGGDSSIEPYLVSHYQLLAHAAAVRVYKTKYQASQKGFIGITLVSHWYLPLSDTRYDQKAAERAMDFMYGWFMDPLTS GEYPKSMRLLVGARLPKFTAEQARLLKGSYDFIGLNYYTSLYATDAPQLRNAKPSYVTDSLVNPAFERDGKPIGIKVASD WLYVYPRGIEDLLLYTKEKYNNPLIYITENGINEYDDPTLSVEESLMDIFRIDYHYRHLFYLRCAIRNGVNVKGYYIWSL FDNFEWSSGYTARFGMTFVDYKNGLKRYEKLSALWFKDFLKEETRLYAE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 33 | 33 | - | – | |
| Phobius | 1 | 14 | 14 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 37 | 37 | - | – | |
| Phobius | 1 | 33 | 33 | - | – | |
| TMHMM | 13 | 32 | 20 | - | – | |
| Phobius | 15 | 25 | 11 | - | – | |
| PANTHER | 24 | 528 | 505 | 0.0 | ||
| PANTHER | 24 | 528 | 505 | 0.0 | – | |
| Phobius | 26 | 33 | 8 | - | – | |
| Phobius | 34 | 529 | 496 | - | – | |
| Gene3D | 35 | 522 | 488 | 1.1E-224 | – | |
| SUPERFAMILY | 39 | 521 | 483 | 1.69E-188 | ||
| Pfam | 48 | 523 | 476 | 1.6E-157 | ||
| ProSitePatterns | 55 | 69 | 15 | - | ||
| PRINTS | 349 | 363 | 15 | 1.1E-22 | ||
| PRINTS | 425 | 433 | 9 | 1.1E-22 | ||
| ProSitePatterns | 425 | 433 | 9 | - | ||
| PRINTS | 448 | 459 | 12 | 1.1E-22 | ||
| PRINTS | 469 | 486 | 18 | 1.1E-22 | ||
| PRINTS | 493 | 505 | 13 | 1.1E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0497300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…