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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0498900 |
| Transcript ID | LotjaGi3g1v0498900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein FAR1-RELATED SEQUENCE 5; TAIR: AT3G59470.2 Far-red impaired responsive (FAR1) family protein; Swiss-Prot: sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5; TrEMBL-Plants: tr|A0A0S3SFZ5|A0A0S3SFZ5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0498900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:91750064..91757893) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGATTTTCAACAGATAATTTTGTTAATACATCCAAGTTACATCAGAATATCTTGATTAGGGTTCCATAGTATACTCT ACGACGTAAGAGAATGCTCCTCTCAAGCACACACATAACCACACATGGTCTCCAGCACATCATTGGATGAATCAATAAAA TTGAAGTCCATGCTGAGCATGTTTGGAATCATTCTACAATTATATTTAAAGTAAGAAACAATTATGGGGAGAAACCTATG TGAGTAGCTTGTAACGCTATAATTGATTGAGAAAAGATAAAATGATCCAAAATGCTAGGAATGAGAGCTCTAGTTTTGGT ATATACTCAATTCAATTTTCGCATGTTTGATACCAAAATTACTAGAGTCACTTCTCCCTTCAGGCCTTCACAAAAACTAC TTCCAATCAAGCTTCTTTCAGAAGCACTTATCCTTCCGTGGAAACCTACATATTTTCTAAATATACACCGACAAGAAAAG AAAAACTATTTTTCAATTTCCTCCAAGGACTATTTGATTTACTCAAGGTCATTTACTGTTAACAATGTACAATTAATCTC TAATTTCTAGTTAGTCGGAATTTAACGGGATGATAAATGATGATTATTATAACGGTGGCTATGTTCAGACATTGAAGATG AACCTGTGGTCGAACATATACTTTCACCTTGCCTTTTAGTAAAATATACCTCTCTTCCTTGTTCATCATCAGAATAAGAT ATGCTTTCCTCTTCAGAATCTGATTCATTCATTGACAAGTCTTCATTTTCAGAATTATCTTCAGTTCCTGATAGCTCCAT CTCCGAGGAATCTGCTTCTGTCTCCGAAAGATTAGCTGAAAAATGATCACTACTCAAATCAAGCTTTCTTCCATCATGAA TTCCATGGTTCCCTTTTTGCCCAAAATTTTTGCTTCGACTGTCCAGCATTGACAACGGATTACGGTCGTTTGGGTCACCA TAAAGAGCAACGTGCCGGTAATATAGTTCTAATTCTTTCTCAGCAATAGCAATGAAGCGCCTCACTGACTCAAGTGATTG CTCATACTTGGATTTTTCCAGTGCCTGAAAGGAAAAAGAAAAAAAAAAGAGAGAAATTTATTTCACTAATCTCAAAGATA AACGAAGAACAAGCTTACATAGCATTTATTAATCTAAAACCTGGTCCCTCCTAAAATAAATGATACTTAACCAGAAAAGT GCAATGGGAATAAGGAATAGGGGAATACAATCTTTATACAAACTGTCAATCCACACCAAACTGCAAAATTCTTTCTCCTA GTTAAAGAGGTACATGTAAAATTGCAAAAATAAATAAATAAATATAAAATATAGATTTTGCATAGTGTATAAATTTATAT TTTTTACTGAACAACTAAACCAGCTGCTAAGGCTATGTTTGGGTATCTGTTGGCACTAGCACAAACATACATTAGCAATA GCACGCTCTTCAAGACAAAAAGTGAATGGAACTTTTTTTTGAATTGGGATGAAAGTCTGTTAACACTGCAATCAATTGAC ATCCAAACACCTATTCAAGTAAGATACAGCTTCAGAATGCAGACTGGAGATCACTATCGCATGAACAACTCTTGCACAAA AAAGCATGGCGCAAAGAACTTTATCCTATAGGCTAAATGCTACGAGCTTAAACACAAGATTAGCCTAGCTAAACGTCTTA ACGATTGGATGATCGGATGGTCTGACCATTCAACAACTTCTAAATAGTCTGAACTCTGAATCAATAAGGAAGTGCAAATG CTTGTCATTAGAACATAGTTTTGACCGGATGAAACAAATATATTAGTGCAATTCCATCGGTAAAATATCGAGATTGCAGT TAAAATATCGAGGAAAAATTAAAGTATTAAACTGAATTTCATTACCAATGCTTTTAAACTATGAACAGAACTACAGTTAA CATTGAGTGTAAGATAAATAGAAAATACACAGAAACGCACCTTCTTTTTGGATAATGTATCTATTGGTGACATAACATCA GGCTGTACATAGTTCTTTCCGCGATAAAATATTATAGTGTCATCTCCAATAATGTGAATCGGAATACCACCACTCAGTCT GGCAAGTTCTTGTGCATACTCATGTACTTGACCAGGTTTACAAGGCTTGCATATGCACTTAACAGTCTCGTGTTTCTTCC AATGCATATGCATATTGAGAATAACCCCTCCAAATAATCCTCTTCTGCCAACTTGTAAATAATTAGAACTTTTCTGAGCC ATTTTCTTCAGATAAAACCGTTCCTCCCCTGTCAAGCCATCTGGTTTTGCAACAGGACCCTGAGCTTTAGGAACTTCATA TCGTTTAAGTCTTTCAATGAGCATGGCTTCCTTGACTCTGGCCTGAGGTTAAAACCAGAGAGTCAGTCCATTAAAATTTT GGTAGAATGTCTAGGAAAATAAGCATTTCTGACCATAATAGAGACACTGAGAAACAATATGATCTGTTGCAAGATCTTTT TTATTATAGTTCTTGATTCTAGATGATAATATTTTTTTAGAGCAGTAGAAAATTTCTCAATCTAATGGGATATCCTTTGT TGGACTTGGAGGCATATATCATAGTTAAATAAAAGTCAACCCAAGCAAAAATTATGTGTAGCCTGTATTCTTAACATGTC TTTTCACGCAAGAGCCCATTAGCCTTAATGTGTTGTGCAGCCATGGTACAATTAGTCACCAGAGGCCTAATTGGCTATTG CGTGGATAAATCACATGCTCACATATCTTTTGTTGAAATTTAACCTTTTTTTATTAGAATGAAGGGATAAAAAGGATTGA ACTGTAAACCACTTGGTCATAGAGGTTCTAATAGCAGTCATGAACCAACTATAGTATCTCAAAAGCTTAAACTGGGAGAA TATGTTCTGTACTATTTTTCTAACGATCCACTACCCAAGAATATATGAGCAAAACAATTAACCTTGTGCTAGTCATCCCT ATGGCCTAGAACTTGGAAATCAAATCATTTATAAGCAAAGTAGAGCTAAACAAATGAAGAAATGCTGTAAAAGGGTCAGC ATCCTAGTACAATGCTCACCTTTTCAATCTTACACTTGATCCTCTCTTCTGGACTATCAAACTTCTTCTTCTTCTTCCCT TTAACACCAAGCCGGCGAGGATCTCTCCTATTAGCAGCTTTCCTCTTCTCCTTCTCTCTCTTCCTCTGCATCTTCAGCCT CTTCTTCGTCGTATACTTATCTTTCTTCGGAGACTCAACCTCCTCAGCCTCAAACTTGGTCTTCCCCCCACTTATCACAA GATTAATCGTGCCATGACTCAAATTTCTAACACCCCACCAAGAACAACCTCGATCCTCAAAGCAATGTCTCAATGAAGAA CACATAGACATTTGAGTCCTCCCAACTAACCTACTAGCACACACACACACACACAACACAACACAACACAAGAAAAACCC TTCAACTTTCAATAAAAACAAATAATATTGCAGTGTGAAGGAAGAGAGAAAAAAAAAACCTGGGAGACACGGAAAACGAT GCAGCATACGAGAATCTGAGAACAGAGGAAGCTCTACGAATGCAGCGAAACAAGGAAGAAGCAGCCATGGTTTCTCTTGC AGGTTACACAGTGTGTGATGTGAGCGTGCGGTGTTTACTGTTTTTTCTTCTTCGCGTGCACGGTGCACCACCCGTATTGG ATCGGGTCGGGTTTCATGAAACACGTGGCACGAATCTAACGGGTCAATAAAAATGGTTGACTTTTTCACGTGATGCTATC CAATAAAAATGCTGACTTTTTCACTGTGTTACTCAGGGTCCATATATACCGTGCCTCACTGTAATCTCTTCTTCTGTATT GTGGTGTGGTGTTTCTCTCTGGAACGCGGAACATAGGATCAACAAATAATAATTAGGGAAATCACGAAACAAGGTTTTGT TTCTACGACAATCGATCATTGAGTGAGTGTTTCTTTTTTCTTTTGACTAATTCTTTTCAATTTTTTAATTCTTGTCGGCT GTGAAAATTGTGATTCTGGTGGAAATTAGGGTTTTCTTTTCTTAATAATGACTGTGGTACTGGTACAATTGTAAGATCCT GAATCCGTTTACTGTGTGTATCTTCATAGAGTCGTAAAGGGTATGCAATAAATTACTCAAAATTGAAGCTTGACGTTGTT GGTGTTTTCTGTGATAGACACTTGTGATATGCATTATTTTCATTATAATGTAGGAATGTTTTTTTTATGAGAACAACACT GCAAGCATCCTTAGGACTTTATGTAGTTTTTGTGTTGTTTATCATTACATAATCTGAAGTTGGGCTTTACCCTTTAGATG CATGATGTCCTTTTAATTTCTGAGGAGCTTGCTGTACTGGGGAGTAAAGCTCCACTCTGATGTAGTTGAGTTGATTAGGT TTTCAATTTATGTAGTGTTTTTATAGCCAAAGATATCAGTGTCATTATGACATTTTTAAGATTTGATTGTCAGTACACTC CAGGGCTGCGGAATGTTATTTTAGGGCAAAATTTGGAGTGCTTGGTTTAGTCGATGTAGATACCATGCGTTATAATTGTC GAGTTGTCACTCCTGTTTCCCTTTATTGTTTAAGGTGGGAGAAACTGTGAAGATCATACTTATGAGACCATATAATTTAG AAACTCATGCTCTTATGTTGCACTAATGCCTTAAAATGTATGAGACCATATTATCTGTATTTTCGGATTAAAGTGGAATA CTCTGTAGAACCTGGAGCTTGTTGTTCAGTCATTTTACCAGCTTTGGAGTAAAAAGGAAGGAAATTCTGTTTTCTGTAAA ATATATTAGCACGTTTGGTTGTTGCGTAGTGTGGGAATCTTCAGAAGGACAGAAACTCTTCCTGACTTTGGGTTTTGTTT TCGGATTCAGTGTGGCAATCTGTTTTGGTTGTTGTGGGGCAAATGCTTGGTGATTTAAAGGCTCTATTTTGTTTATTTAT TATGATTTCGTTTTGTTTTGGCGGTTGTGTAGTTAATTATATGGTTTTTGTTTGCTTTTCTGATCTTCTTGTAAACCATG TTGTACAGTTGTACTTACCGAACTTGGTGAATTTATGTGTGTCGTCAGTCTGCACAACCATGTATTTATATCATGTAAAG CATAGAATACAATGAATGTAATGCTAAATCAAAGCCCCTATGTCAGTAACCGTTATGCTAATTAGCTAATATTTACATAT TTGATTCTAACACTCCCCCTCAAGCTAGAATTTGTATGTCATTGGTAGGAACAGACACAAGCTAGAATATGTTTGTCCTT GGTAGGAACAGACACTAAAGAAGTAAGAAAGACTGTTTGGTGAAGAAAAACTGTTGATACTTCTGGATATTTGAGAGATA CAGATCTTTCCGGCTTTCCCAAGTTCTGTATTACAATGATCACAATGATGAAGTCACTTTCCATTTCTATGTCATATGTA GCACTTCCTCTCTCACTCTTAACTGACATCCTAATCTAGGCCGAAGAGGCATCAAACCCAGTGCCATATGCGGACATGTT GAGGTAGAGGTGAGTGAGAACGAGGTGTAGGTCTAGGATAGGCTGTGGTGTGGGTGGTTGGAAAAGTAGCTCACACGCCC AGACGTGGCGGTGCATGTCAGAAACGTGCACAAAAGGGATGCACGCGTGGCGGCACGTGCAGTGGCAGCCCAGTGGGTGT CATCAGGGTATCTGGCACGGTTGATGATGGCCTATGGTGGAGACATACGCCAGAGAAGTGTCATCTGGTGGAGGCATGGC TGCTGTCTTTAACAATCAGGGCACATAAATTGGAAATTAGAAGGGCCACTAGGGGGAAAAAGGCACGGTGGTAAAATTGA ATCTTTAGAATACTGATACCACATAGAATTTGGTAATTTTGTGTGACTAACCAGCCTACAGATTCATGTACTTATATTTA CAGCATTGAACAATTGTGATGCTAAATAAAAACCTTACAAACCAGTAACAGTTATTCAATTAGTCAAGAATCTGAAATGG ATACTAATATTTACGTATTTGATAATTTTGGGATCTGGACTATATTTATTGACATGTTATTTGTTTTTATTTTAAATGAG AGTTTTGTTCATTAAATGTATAGACTTTTTGTAGATATAAACAGGACATTGATAATCTTATAGAAAACTTTTTGTTGATG CAGTGGAGTTTGCGGTTGATGGCTCTATCAATGGCGAGACATCCGGAAATGCTGCTATTGGTGAGGTCAGCAGTATAGCT GATGAAAACAGAGCTGGAGGAAGTTCTGCTGAACCTTACAAACAAGATCAAGATGATAATGTGACTCGAGATTCTTCTGG AGGAGAAACTATACCATCAGCAGTTCCTGCCGTATCACTTGCATCTGTTGATGAGCCCTATGTGGGTCTGGAGTTTGATT CGGAAGCAGCAGCACATGCATTTTATAATGCATATGCCACTCAAGTTGGATTCATCATACGCGTAAGTAAACTCTCACGA TCAAGGCGTGATGGAACTGTTATTGGACGGGCTCTAGTTTGCAACAAAGAGGGTTACAGAATGCCTGACAAGCGTGAAAA GATTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATCTTGGTGAGGAAAGTTAGTTCTGGTAAATGGG TTGTTACAAAGTTTGTAAAGGAGCACACACATCCTCTGAGTCCTGGAAAAGGTAGAAGGGATTGCGTATATGAACAATAT CCGGTCAGTTCCTGTGCTTTCACTACTGAACAATTGTATATAGTACTGTCTTAGTTTATTGTTTTAATTGTTACCTTGTG CTCGATAAATTGGATATGGAACCTGTGTCAGACTGTCAGATCATGATGCTACTATTTTGCTAAATATTAGAGCACATACA TCCTCTTTTCCTTGAATACTTGTTGCTTTTTTTTTGGGAGAGGACTGAGGAGGGAGAATTTTAACTCATTTGCATTGCCC CCTTATCTTTTGAAATTAGAGCATTCTTCTTATGTTGCCATTGCCCTTAGAGAAACCCTTTATCTCATAATGTAATTGCT AGTTTGAAATTTCCTTAATAGCACTATCATCGCTCCTTCACAGTTCCTTTTTCTTTTTCCTACTTACCTCTGAGTTTTTA TGCTTTTTCCAGAATGAGCACGATAAAATTCGGGAACTTTCTCAGCAGTTGGCAATAGAGAAGAAGCGTTCTGCAACTTA TAAAAGACATCTTGAATTGATATTTGATTACATTGATGAGCACAATGAGAGCCTTTCAAAGAAAATACAGCACATTGTAG ACAGTGTGAAGGACATGGAAACCAAAGAAGAGTAGAGTCACTGATAGGTTGAGCTTTCAATTATCTTATCATTTTCCACT GCATGAAATATGGAATCAAACTATCAGTGTCCAAAAGTGCTGTGAGATGAAGCATGCAATGATATCTGAGAACTGCTGAC CTTTGGGTATCTGCTTTGTTCCTCTTCTTCATGGAAGAGTTTGATACAATGGAATTCATTGTATTGATTTTTATGCTGTA GTATTTTTCAGTTGGTAGAAGAAATTAGTTCAGTGAATGTATAGGTCCTTTTTTAGTCCATTCTTGTGAAGTGTTAGCTA ACAATATGATAAATCATAACAGGCATTCAGATGCCTTGATAGACTTTAATTATTCGGTTGTTGACTCTGATCCAGGGCTG TCTCCTGTGTATAGATTCAAATAATGACTAGTAAGTAGCCTGTGCAATGCAAAGGTTTTTTCTTTTCAATTTTTTGCTTC ATCAGAAACCAAATCGAAAAGAAAGACACTAAGCAGCTGACAACGATTCTCTCTGTAACCATAGAGCGAG
CDS sequence (LotjaGi3g1v0498900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTTGCGGTTGATGGCTCTATCAATGGCGAGACATCCGGAAATGCTGCTATTGGTGAGGTCAGCAGTATAGCTGA TGAAAACAGAGCTGGAGGAAGTTCTGCTGAACCTTACAAACAAGATCAAGATGATAATGTGACTCGAGATTCTTCTGGAG GAGAAACTATACCATCAGCAGTTCCTGCCGTATCACTTGCATCTGTTGATGAGCCCTATGTGGGTCTGGAGTTTGATTCG GAAGCAGCAGCACATGCATTTTATAATGCATATGCCACTCAAGTTGGATTCATCATACGCGTAAGTAAACTCTCACGATC AAGGCGTGATGGAACTGTTATTGGACGGGCTCTAGTTTGCAACAAAGAGGGTTACAGAATGCCTGACAAGCGTGAAAAGA TTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATCTTGGTGAGGAAAGTTAGTTCTGGTAAATGGGTT GTTACAAAGTTTGTAAAGGAGCACACACATCCTCTGAGTCCTGGAAAAGGTAGAAGGGATTGCGTATATGAACAATATCC GAATGAGCACGATAAAATTCGGGAACTTTCTCAGCAGTTGGCAATAGAGAAGAAGCGTTCTGCAACTTATAAAAGACATC TTGAATTGATATTTGATTACATTGATGAGCACAATGAGAGCCTTTCAAAGAAAATACAGCACATTGTAGACAGTGTGAAG GACATGGAAACCAAAGAAGAGTAG
Protein sequence (LotjaGi3g1v0498900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFAVDGSINGETSGNAAIGEVSSIADENRAGGSSAEPYKQDQDDNVTRDSSGGETIPSAVPAVSLASVDEPYVGLEFDS EAAAHAFYNAYATQVGFIIRVSKLSRSRRDGTVIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWV VTKFVKEHTHPLSPGKGRRDCVYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFDYIDEHNESLSKKIQHIVDSVK DMETKEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 58 | 58 | - | – | |
| PANTHER | 1 | 247 | 247 | 8.4E-138 | – | |
| PANTHER | 1 | 247 | 247 | 8.4E-138 | – | |
| Pfam | 87 | 173 | 87 | 1.4E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0498900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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