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LotjaGi3g1v0506200.1

Overview

Field Value
Gene ID LotjaGi3g1v0506200
Transcript ID LotjaGi3g1v0506200.1
Lotus japonicus genome version Gifu v1.2
Description NAD(P)H dehydrogenase (Quinone); TAIR: AT4G36750.1 Quinone reductase family protein; Swiss-Prot: sp|O23207|FQRL2_ARATH Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2; TrEMBL-Plants: tr|I1LJG3|I1LJG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0506200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:92349076..92351290) extracted from Lotus japonicus Gifu genome v1.2.

GTTCATCTTATCTTATTAGTTAAAACAGCTCATAAGTGAGTGAAGTCAAATCCAAGCTTCTCCACTCTACATTATTTGCC TTTCCTTTTGTTTTTGTTGTTGTATTTTGTGTAGGCCTATAGCAGAGTTAACATCAAAGCCTATAATTCATTGTTAATTT AGAACCAACATTTGATATCCATAACTTGAATCTCTCAATTTCATACTTTGTATCTTGTTTGACAAGAAAGATAAGAATTG TCTTATTTGAGCAAACTATCATCACAATTTCATAGCTAGTTGTATTCAATGGGGAAAGGAGGTGGTTGTGTACCAAGCAA GAAGAAGGCACCAATTTTAGACACAGAAAAGAATGATCCTGTCAGTGTTAGTGTTGAAGTTCCAATTCAAAATAATGATG CAGCAATTAGTATAAGCCAAGAGGCGAAAAAGCTGAAAGTTTTCATTGTGTTCTACTCAATGTATGGCCATGTGGAGTCA CTAGCGAGATCCTTGAAGAAAGGGGTTGAATCCATTGAAGGAGTTGAAGGGGTTCTATACCGTGTGGTGGAAACACTGCC TAAGGAGGTCTTGGAACTCATGAAGGCACCTGAGAAGGATGATCAGGTGCCACTGATATCTGCAGAGGAGTTGGTGGAGG CTGATGGGGTGCTGTTTGGGTTTCCGACAAGATACGGCACCATGGCAGCACAGATGAAGGCGTTTTTCGATTCAACAGGG CAGCTGTGGAAGGAACAGAAGCTGGCGGGTGTTCCTGCTGGCTTCTTTGTTAGTACCGGCACTCAGGGCGGTGGCCAAGA AACCACGGCGTAAGTGCATGTTTAGAAATCATTCTAGAATTTAAACAAAACTCAGAATTAATTCTAGGAAAAAGCTTATG TGAGTAGCTTTTGGGTTTCAAATTTGATTAGGTCTTTCTTTTCTGCTATGATTACTTGACTGTTACATGCATCACATCTT ATCTCATCTCATGTTTTTATTTTCTTCAATGCAAATTCAAAAGTTCTTCTAAGCTGCTTCCTGGTTCATAATTGATTTTG GGGAGAAGCTTCTCAAAGTAGCTTCTGAATTCAGAATTGATTCTGAAGAAAGACAAGATAATCCAAACATATTATAAGAA GGTCTTTCCTTTCTGCCATGATTCCTTGACTGTTAAATGCCTAACATCTTTCCAATTGTTTATGGATTTCCATAAATTGA TTTTTCAGAAGATTGAAAAGGGGTTCTTGATAGCTTTTGCATAACTTGTTATATTGAGTTAGGAGCTGAGATTATGATTT TGCATGTGGGGCATGATCAGAAGACATTTTTGGACTTTAGAGTCTTCATTTGGTAATGAAGTAACATATTTTTATGTTGA TTGTGATGTAATATGTGATAGTTAGTATTGTTATTGGGGGACAAACCTTTGAGGAGTAATAACTAATCAGACATATATAA CTATTATTGTAGTTGGACAGCAATTACACAGTTAGCCCACCATGGAATGCTGTATGTTCCTATTGGTTATTCCTTTGGTG CTGGAATGTTTGAAATGGACTCCATTAGAGGTGGATCTCCATATGGTGCTGGAGTTTTTGCTGGTGATGGCTCAAGGCAA CCAAGTGAAACAGAGCTGGCCCTTGCTGAGTATCAAGGAAGCTACATGGCTACAATAGTCAAGAAATTGGGCCAGAAAAG CTAGATTTTATATGATCAAATTCTTATTGTAAGAGTTGTTAAACTATAGCATGTTCTGACCAGCTTGTTTTTTTTCAAAA TCAATTCAAGCATCCATAAGTGTGCTCCGGTAAACTTCTCCTCATAATTGATTTTGAATCAATTGTGGAAGGACTTTCAA ACACGCACTAGTTTTCCATCTATATCCCAACAGCTCAAAGATTCATTGAATTCTATGATGATATTCCAATGTTGTGTATA GTATTGGTCCAAGATCTGCATATGCTTGTCTTTCTCTCTTGGGGCAAGAAAACATGTACACTATGTAAACTTCACACAAT CATACTTTTGATTCTGCCAATTTTTGTATCAGCAAATACTTGTAAAGGGAATCTTTCATACCGGATCACTTTTCTTTTCA TTTCCTACTTAAATACTCGGTGAAAGAGACATATTTCATCAGGAATAAAAGTCAAGATGACATTTCCAGAAAAATGATTG CAAGAGAGCATATAGATGAAATATATATAATTTTAGTGCTTGTTTGTTTGTGTTT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0506200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGGAAAGGAGGTGGTTGTGTACCAAGCAAGAAGAAGGCACCAATTTTAGACACAGAAAAGAATGATCCTGTCAGTGT TAGTGTTGAAGTTCCAATTCAAAATAATGATGCAGCAATTAGTATAAGCCAAGAGGCGAAAAAGCTGAAAGTTTTCATTG TGTTCTACTCAATGTATGGCCATGTGGAGTCACTAGCGAGATCCTTGAAGAAAGGGGTTGAATCCATTGAAGGAGTTGAA GGGGTTCTATACCGTGTGGTGGAAACACTGCCTAAGGAGGTCTTGGAACTCATGAAGGCACCTGAGAAGGATGATCAGGT GCCACTGATATCTGCAGAGGAGTTGGTGGAGGCTGATGGGGTGCTGTTTGGGTTTCCGACAAGATACGGCACCATGGCAG CACAGATGAAGGCGTTTTTCGATTCAACAGGGCAGCTGTGGAAGGAACAGAAGCTGGCGGGTGTTCCTGCTGGCTTCTTT GTTAGTACCGGCACTCAGGGCGGTGGCCAAGAAACCACGGCTTGGACAGCAATTACACAGTTAGCCCACCATGGAATGCT GTATGTTCCTATTGGTTATTCCTTTGGTGCTGGAATGTTTGAAATGGACTCCATTAGAGGTGGATCTCCATATGGTGCTG GAGTTTTTGCTGGTGATGGCTCAAGGCAACCAAGTGAAACAGAGCTGGCCCTTGCTGAGTATCAAGGAAGCTACATGGCT ACAATAGTCAAGAAATTGGGCCAGAAAAGCTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0506200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGKGGGCVPSKKKAPILDTEKNDPVSVSVEVPIQNNDAAISISQEAKKLKVFIVFYSMYGHVESLARSLKKGVESIEGVE GVLYRVVETLPKEVLELMKAPEKDDQVPLISAEELVEADGVLFGFPTRYGTMAAQMKAFFDSTGQLWKEQKLAGVPAGFF VSTGTQGGGQETTAWTAITQLAHHGMLYVPIGYSFGAGMFEMDSIRGGSPYGAGVFAGDGSRQPSETELALAEYQGSYMA TIVKKLGQKS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR30546:SF24
22 247 226 2.2E-132 –
PANTHER
PTHR30546
22 247 226 2.2E-132 –
Gene3D
G3DSA:3.40.50.360
44 250 207 2.4E-70
IPR029039
TIGRFAM
TIGR01755
50 246 197 7.0E-68
IPR010089
SUPERFAMILY
SSF52218
50 246 197 3.15E-54
IPR029039
ProSiteProfiles
PS50902
51 239 189 21.785
IPR008254
Pfam
PF03358
65 191 127 3.1E-10
IPR005025

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003955
Molecular function NAD(P)H dehydrogenase (quinone) activity Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone.
Subterm of
GO:0010181
Molecular function FMN binding Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0506200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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