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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0506700 |
| Transcript ID | LotjaGi3g1v0506700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BURP domain protein RD22; TAIR: AT1G49320.1 unknown seed protein like 1; Swiss-Prot: sp|O65009|BNM2A_BRANA BURP domain-containing protein BNM2A; TrEMBL-Plants: tr|A0A0S3SDJ5|A0A0S3SDJ5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0506700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92394489..92398323) extracted from Lotus japonicus Gifu genome v1.2.
TTCATATCATGGTAAACTAAAGTCAAGACCTTGTTTTAGCAGGAATTAAACATGTACCGTTTGAATCATGATTTATTTTA TTTTATTTAATAGTTCTACAATACTTATGAAAATACCTTAGCTTACGCCTATAAAAAGGTCAGCTCTCTTCAAGGGAAAC TCATCCTCACTCCTGAGTAGTGAAAGAGGCTTTCTTTCAGCATAGCAGAAAGATGACTCCTCCTGCACCTGCACTTCGGC TTCTTGCTTTAGCCCTTTTCTCATTCATGGTAATTCAATTATGCATGGTTTTAAGCTTGCAATGATATCATATTTATAGG TCAATTTTCATATGTACATGTAGAAATATATCTACCGTTACAGAATTATTTTGTCAAAGTATACTGTTTCAAAATACTTA GCTCGTTTAATCAAGTGATCTAATTCATTATAATACCATAATGACTTGGATGTGATGGATCCCATTTTTATAACCATTCA TTCAGTGATACACAGAACATATTACCGTAGATTTTTTCTTTCTGAGATTCTCTGTTAGCCAGGCTAGTAGGTTGATATTC TCTCTTCGTTTGAAGCATTAGACACTGAAATGTAACACCATAGTTACTTCTTCTAAACTGAGCTTTCTTTCATTTTCAGT ATATTACAAACAAGCTTAAGTGTTAATTGGGGTTTCATTTAATGTGGCAGTACTTTTAATGAACAGAATATTCGTTAGGA TTGCACTTTGAGATAAAAAGTTAACGGACCTTTTTATGGCTTGGGAGAAAAGTTCATTCATGTTACACTCAACTATATCT CTACACACACTTTGCATCTTCATCTAATTTGTGATTTTTTTTGTTATTTTCATGAAACACGCGATAACATAGCACATTCC AAGCACATGCTCAGTAATTATACTCTGCTTTACCATTTAAACATCAGTAGGAAATAATCTACATACCTTTATTGCTCAGT TACATGATATGTGCAAATGACTCTCCCATGCACTTGTCTCTGTTATAATTCAGGATTCTTTTATATGTTGAAAATCCCCT CAGTCAAACTACACATAATAATTTCCATAGCTGGAACACTCATTTTCTTCTCACTGACATTTTGTAGATTGGCCAAGGCA TCAATGCCAGAGATTTGAAGGTAGAACTACAAGATCAGAAACAAGTGGATTCGAATGGAGCCACCTCAGTATCCAGTGAT GTGCCTTACATTGCCGGGTACTTAACCACAACCACCAAACAACATCACCATCCATCACACCATGGAAACACCGATCAACC TTACATTACTGGATACAAAACTACTACTCCTCCTGGTACCCGTGAAGCCAATCAACCCAATTACATTGTTGGCTATAAAT CTGGTAGCCATGTTTCCAATGAACCTTACATAACTGGGTACAAAACTACTCCTGCTGGAACCAGTGAAGCCACCCCAGTA TCCAGTGATGTGCCTTACATTGCCGGGTACTTAACCACAACAAACAAACAACATCACCACCCATCACACCATGGAACCAC CGACCAAGCTTACATTACTGGGTACAAAACTACTACTCCTCCTGGTACCCGTGAAGCCAATCAACCCAATTACATTGTTG GCTATAAATCTGGAAGCCATGTTTCCAATGAACCTTACATAACTGGGTACAAGACTACTCCTCCTGGTACCAGTGAAGCC AATCAACCCAATAGTGCTACATACAGAGCCCATTCTGGACCTGGTACTCATGACCCAAAGGATTCTGGTGAACCTTATAT AACTCAATATGGTGACAAACCCCCCAAAGAATCTACCTCAGCTCAGGATTCAGTTGAACAATATCTAGCTGAATATGGTG ACAAGACCCCAAAAGAATCTACCTCAGACAAGGATTCAGATGAACAATATCTAACTCAATATGGTAACAAGACCCCAAAA GAATCTACCTCAACCCAGGATTCAGGTGAACAATATCTGACTCAATATGGTGATGGGACCCAAAAAACTGACCCAAAGGT GTCTACTCAAGGTCATGAAGAGAAATCCAAAAACGTGGACCATACAGAGGCTTTCAAGACTGGATTTTTTGCTCTGGATG ATCTTTATGCAGGGAATGTGATGACCCTCCAATTTCCTGTCCAAGAGATTTCTCACTTCCTTTCTAGAAAGGAGACAAAC TACATTCCTTTCTCAAGTTCACAACTCCCCAGTGTTCTTCAGCTCTTCTCAATCCCTGAGGATTCTCCCAAGGCTAAATC CATGAGAGGAACACTTGGACAGTGTGAAGGAGAACCCATCACAGGGGAGAGAAAGATCTGTGCTACCTCTCTAGAGTCCA TGCTTGAATTCGTTGACTCAGTCATTGGTTCAAACACTGAGGGTGATCTCCTCACAACCAGCCATCCCTCACCCTCAGGT TCCCCTCTGCAGAAGTACACCATTTTGGAAGTGTCACAAGATATTGATGCTCCTAAATGGGCAGCATGCCACCCCCTCCC TTATTCCTATGCGGTTTACTATTGCCACTATATATCAACAGGGACCAAGGTGTTCAAGGTCTCACTAGGTGGTGAAAATG GAGACAGAGTGGAAGCTCTTGGTGTTTGCCATTTGGACACATCTGATTGGACTCCAAGTCACATTATCTTCAAGCAGCTT GGTATTGAGGCTGGGAAGGCTCCAGTTTGCCACTTCTTCCCTATAAAACATCTCATGTGGGTTGCCAAGCCTTCAAAAGC CACAATGTGAAAAGAAGGGATATGTGTTGGGTATGTGTAATAAAGGTATATCCCAGTAGTCAGCTACAACAACATGCTGA TGACCATGTTCCTTGAGTACTTCCTTTCTCTTTGTATGTCTTGTGTCCTGTTTTATGTATAAATAATAACAATGTGGAAG GCACGATAGGTATTGAAAAGTGGAAATACTTCCATGTTAGTGTTTATGTCTTTGCCTGAAGAGGATTGCACAACACAACA TGAATGGAAACATGGTACTTGCAATCTTAATTTCATAATGTATAAGCAGCTAGCTAATGTTTAACTTATCTTGGGTGCAA TGTTCCCCACTACCTTCTTCCTACCAACTTAACCCAAACTTAACATCATAATACAATTTGAAGTCCTAGAGTAGAGATCC AAGTGAAGCATGTAAATTGGAAACTTAATTTCACACTACAAATCCAAAAGATCTGGGATAAGAATGTAGGGCTATCTGCA GTAACTTACAATCCTGTTTCATAAAAAAGAAAAAAAAATCACTCACCTTTATTTCCAAAAGTAGATGTAAGAAATATTGT TGAAATTCATAGTAAGAAAACATGATATGTTGAACATTTGTAATTTGTATTTAAAATATTTATTTAGCTTTCCTTTGTAA CAAAAATAAATTAAAAATATTTAAAATTCAACGTGGTACTTATATTAAAAGAATTGAAATTCAAAGTGTGATTGGAATCA AAATGGATCAAAAGGCTTCAAAACCAAATGTTTATAAGGCAACTCAGTCATGAAACCCAGAATTCGATCTTCCACATTTG AAATAGCGACAAACCATGGTTCATCCTCTGCGCCCATAAATTATGACACTTCAAATCAAATTAGTGAACAATAAATTAAA TCTAAATGAACTAATTTATTAATAATTAACAACTAACATTTGTTTATATAAAAAAATTGAGACAAGAAAGGTCCTAATCA CACCGGGTCTCTACGCAGTCCATATGAAATTTTGTACATTATCCAAATACCCTAAGCCCAGGCCGAAATACAGCCCAAGA TCAGAAACATAGTAGTCCACTACAATATCCCAGGCCTTAATATGTTCAACGATTAAGATTATGGATCATTAGAAT
CDS sequence (LotjaGi3g1v0506700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCCTCCAATTTCCTGTCCAAGAGATTTCTCACTTCCTTTCTAGAAAGGAGACAAACTACATTCCTTTCTCAAGTTC ACAACTCCCCAGTGTTCTTCAGCTCTTCTCAATCCCTGAGGATTCTCCCAAGGCTAAATCCATGAGAGGAACACTTGGAC AGTGTGAAGGAGAACCCATCACAGGGGAGAGAAAGATCTGTGCTACCTCTCTAGAGTCCATGCTTGAATTCGTTGACTCA GTCATTGGTTCAAACACTGAGGGTGATCTCCTCACAACCAGCCATCCCTCACCCTCAGGTTCCCCTCTGCAGAAGTACAC CATTTTGGAAGTGTCACAAGATATTGATGCTCCTAAATGGGCAGCATGCCACCCCCTCCCTTATTCCTATGCGGTTTACT ATTGCCACTATATATCAACAGGGACCAAGGTGTTCAAGGTCTCACTAGGTGGTGAAAATGGAGACAGAGTGGAAGCTCTT GGTGTTTGCCATTTGGACACATCTGATTGGACTCCAAGTCACATTATCTTCAAGCAGCTTGGTATTGAGGCTGGGAAGGC TCCAGTTTGCCACTTCTTCCCTATAAAACATCTCATGTGGGTTGCCAAGCCTTCAAAAGCCACAATGTGA
Protein sequence (LotjaGi3g1v0506700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLQFPVQEISHFLSRKETNYIPFSSSQLPSVLQLFSIPEDSPKAKSMRGTLGQCEGEPITGERKICATSLESMLEFVDS VIGSNTEGDLLTTSHPSPSGSPLQKYTILEVSQDIDAPKWAACHPLPYSYAVYYCHYISTGTKVFKVSLGGENGDRVEAL GVCHLDTSDWTPSHIIFKQLGIEAGKAPVCHFFPIKHLMWVAKPSKATM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 209 | 209 | 1.3E-129 | – | |
| PANTHER | 1 | 209 | 209 | 1.3E-129 | – | |
| ProSiteProfiles | 1 | 203 | 203 | 73.821 | ||
| SMART | 1 | 203 | 203 | 2.3E-51 | ||
| Pfam | 2 | 201 | 200 | 1.3E-65 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0506700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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