Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0507100 |
| Transcript ID | LotjaGi3g1v0507100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BURP domain protein RD22; TAIR: AT1G49320.1 unknown seed protein like 1; Swiss-Prot: sp|Q9XI99|USPL1_ARATH BURP domain protein USPL1; TrEMBL-Plants: tr|G7JG28|G7JG28_MEDTR Dehydration-responsive RD22-like protein; Found in the gene: LotjaGi3g1v0507100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92430167..92435948) extracted from Lotus japonicus Gifu genome v1.2.
AATAACCAATAATGCAACAAAATTTAATTGACAAATAATTTGGGGTACTAACTACATGTTAATTATTTGGCGATAAATTA CATAGCGAAATACCATCCATAACAGACCACAAAGAGAAACTGAGCCTTTCCTTCGAAGTAGAAAATGAGACCTGTTCTTG CATTGCTTCCTTTGCTCTTCCTTTTCGTGGTATGTTTTAATTTTCTATTAGTCTCAGCAGTTTTATGAAACGTTCTTTCT TAGTCACAATTAGTTGTTTTTATCTAATAAATTTCTAAACATGCATGTGCCCGTAAAATCAGCTCAGTAAACTAGCGTGT GTAGTTTTCAGATGAAGAAAAAAGAAGAAGTAAACTAGGGTGTCCAATTCTACCGCGTTGTTATTAATCCACTTATAAAT TATGTTTGTGTTATTATAAAATATGATATTTTCAATATGCACTTTAATGTAAAAATAAATTTGCAATTAAATTTGCGAAT CAATTTTTATTGGTCTATGGTAGATAGAGTCAAACAACAATGTTAATTAAAGACAAAATTGATAAAAAAAAATATATATA TTTCAAAGACCTTTATGAAGTGATTGTATTTCTTCATTGACTAACCACCATTTTTCTTTTTCTTTTTTTCTTTAATTTCT TATTAATACTATTTGGAGAAGTTATTCGCTGGTACTATAGAATCAAGAAAAGATCAAGGAGAATATTGGAAAATGATCAT GAAAGATCAAGAAATTCCAGAAGGAATTCAAGGCCTTCTTCAATTGAAACCAGCAAAGAATTCTGAACACAAATGCGATG ATGATGACCATGTTGATACAAAGGGAAATAAGAAGTACGTGGAGGATTTGGAACCTAGGCCAAGTATCACTGCATATAGT GAAGAAATCGTGAAAACCTTTGAGCCAAGACCTAGTATCACAACGGCTTTTGTACCCAAGTGGTATAGTTTATTTTGGAA ATTACAACTTTGGGGTACTTTTTTTTTTATTTACCAAACTAGTATAAATCGCCACTGTCAGTGGCGATTCTACTTGTTTT TTTAATTTTTTTAAAGAATCGCCAATGCTATTGGCGTTTTTGTTTTTGTTTTTTTCGTTTTTTTAATAAATCGCCAACCA TGTTGACGTTTTCTTTTCTTAATTTTTTTTCTTAAAATCGCCAACTGTGTTGGCGTTTTCTTATTTTTTATTTTTTTTTT CTTCTTAAAATCGCCAACACAGTTGGCTTTTTCTACTTTTTGTTTTTTTAATTTTTTTTAAAATAGTAATTAAAATGGTA TTTAATCAATTGATACTCACACACAATGTTGTGCCATTACTCACTTTTGCAACACTTTGATCATAAATATTTGAACCGAT ATTTAAAGATAAACATATGCATTACATAATTTAGTTCAAGAGAAAATTGTTTTTTATTGTGGAGTCGAGCAGCAATGAAT TTTTTCCCGGACACGTTGGGGTCGTTGCCTTCAAGGTTCCCTGTAATAAATGAGGTTTGTGAATTCAATTTAAAGTTGTA ATAATGTTTTATTTGTTAATAACTTGTAATAACGTTTTAAAATTGTATAAACAATTCATATGAACACCATATGATGCACA TAAAATAAGGAGGATAATCAACGATTCTTCCAACTTTAAGTGCTGGAAGAACCTCGAAGGCAACGACCCCAACGTTTGCG GAAAAAAATCCATTGCTGCTCGACTCCAGAATAAAAAATAATTTTCTCTTGAACTAAATGATGTAATGCATATGTTTATC TTTAAATATCGGTTCAAATATTTATGATCAAAGTGTTGTAAAATTGAGTAATGACACAAAATTGTGTGTGAGTATCAATT GATTAAATACCATTTTAATTACTATTTAAAAAAAAATAAAAAAAACAAAAAGTAGAAAGCGTCAACTGTGTTGGCGATTT TAAGAAAAAATAAATAAAAAGAAAACGCCAACTGTGTTGGCGATTTTAAGAAGAAAAAAAGAAAGGAAAACGCCAACATG GTTGGCGATTTATTTAAAAAACGAAAAAAAAAAATCGCCACTGACAGTGGCGATTTAGACTAGTTTAGTAAATATAAAAA AAAGTACCCCAAAGCTGTAATTTCCAAAATAAACTATACCATTTGGGTACAAAAACCTATCACAGCATATATTGAAGATG CTCATAAAAGTGAGAAACCACAAGTGAATAGTGAGTTTGAACCCAGGCCAAGCATTACCAAATATAATGACAAAGTGAAT TAGAACAAGAATGCATCTACATCAATTAATGCAGTTCCAAGTAAGTTGTGTGTTGTGTGAGTGTATCCAATAATTGATTT GGTGTAATGTATTGTGTTTCTCAATAATATATGTAAAATCATGGCTGATGTATATATTAATAATAATGGATGGTCTTTTC CTTTCCTGTTCATATGTATATCTTTAAATTTGCTTCCTAGTCGATTTATTTTGTAAGTCAAATATATATTGAAAATATAG TACGTAGAAGAGGTACTTCAACCCATTATAAAAAGAAATAAAGCACAAAGATAATAAGACTTAACAACTAATGCACACGC AGCTGCAAAAAAGATCAAAACACCATTACACACCAGATTCCTCTGCCATAAGACTAGCACGAAATGCATACACTTATGCT TGTACTCAACAATTGCAGCCATGCATATCCCTTTTAATTTATTAAAACAGCTACCGTTCATGTGAGAACCCTAGCATTTG ATGTGAATGATGCAGAACCACAAGAGCGCATGCCACCACAACCATATAGTACTCGTACAGAAGTCACGCCACCGAGCACT ATATGACCCTAACCCTCATGTACATAAAATCTCATTTCAATGCCTCTAAGCAAGCACCAAGGTCATGGGACCACTCATAC ATGGAAACTGGAAAGCTTCGGAGATTTAGCACTTTAAAATACAAAAAAAAGGCGGGCTTTAAAAGGATTTTTTAAATTGA TGTAGGGGATCATCGACCAGTAAGCAACACTAAAGCGCTTATGATAAAAACTTAAAAAGTGTTGTCGTACAACAAGAAAT ATGTGGATTAGCTACCAAAGTTTTGATAGCAAAGCCACATCAAATTCTTAGCAAACCAGTAGCAAATTAGCAAACTTCAT CAGCGGCCTTAGCTTCCAAAATGTTGCAAAATCTCTCATTGTTTCATTTCTTACGTTTTAGGTTCTCACTTTTTATTTTT TTTACGGTACTATTTAATTTATATTTTATTATTCTCTTTCTCTGCAAGAAAAAATGTCAAATAAAAAATATGAATCTGAT TTTGAAAATTCGAAGAAAAAAAAGAGAAATTGAAAATAAGTTTCTTAAAATTAAAATTGCTTTAATCCTTAGGTCAACAA TATCACAAGATAGATTGAATGAGTAGGTTATCTTATATATCAATTGAAAGCAAAATATTAGAATTGCTTGATTATAAAAC TCTGATAAACGGTTTCACAGCTCAAAAAACTAGAAAATTAATATAAAAAATGATAATCTACATGATATAATAAGTCTCTT TAATATTCTTATAAAAAAAATCACTATAACATTACATTTTTCGCCTTAGACCAAAAAATGTGTGAGTACACATCCTAACA ACCTATGTCTCTCCTCCGAAAGATTAAATTCAAATTTGACTAGAAGGCGAAATCCAAGAACTTTGACGAATCCACCTTAA GTAGTCCATTAAGTCATTAACCCTCTGCCTTGCTTGCTTTCACAGTATGAAGGGCCTACCCCATTACAGTGTCCTGCTGA TAAGTCATTCTAAGGGGTGGTTTGTAGTTTCTGGCCTTTATCTACATTCTGCATCCACATGCCCATGCTGAGTCTGTTAT CTTCCTTCTGTAATTGGAATCCACGATGGGTTGGCAGTGGCAGTGGCCTTGCCTTTGTCGTTCCTACTGCAAGTGTCAGG TGTGGATCAGGAGGGTTGCAATGTTTTAACTGTGAGGAAATTTCATTGGGAGATTGTGAGGTCAATAGTGCTTGGCATTA ATTGGTGGATGTAATTGTAATGATGCAGCATGTTGCTTTGCGAGTTGGGGAAGATCCATTATTGGAAAATTGAGGATGCT GTCCATTTGAGCCTGAGGTAGCTAAGCTTCGCTGGTTGGAAGTGGGTCAGGTTGTGCGTTGGTATCTTGTGTAAAGGGTA GTGGAAATCCAAAAATTGCAATCTCATAAAGCTAAGTTGATGATACTGGGGTCTACTGCTCTTGTTCTGATCCTCTGGGC GTGTTGTACAATTATGTTTACTGGTGCAGCATCACGGATATGGATATCAACAGTATCCTCTCTTGGTGCTAGCTCTTTGT TTGGTATAATCAGATTATAATTAACATAACACAATTTTATTTGGTGGAAAAAAATTTGACAACAAAATATTTCGGTTCCA ATGTGTAAAATCCATTCCTGCTGAAAATTATGTATAATGTGTGGATTAAATATTGGATTCGAACGTTATGCACTATTAAT TAATTCTTATGAACCACCACGGTGTTCAATTGAGCTCTCTGTTCTTGTAGACAAGGTGAACAGAAGTGTTCAGTGCATGC AAGCAGAAACATGGGTGAAAAACTTGTATCTTGGATCCTCTTTCTTCATCTGCTAGTAATCATGGTACATTAAGTATTCA ATTTATTCTTGAATTTTTGCTTCTCTTTTAAATTCCTTAATTAACAAGCAATTTGTAGAGATATTAATATTACTAATTTA TTTCACTTTTGCAGAGTTCCTATGGTGGAACAGAAAACAAACTCCAAGTAACAATCTCTGATGAAGATCATCAAACAGTA CACACACACCATCATCATCACTCACATGTAGACTCTTCTGTGATGGTGTTCTTCACCTTAAAAGACTTGAAGGTTGGGAA AAGAATGCCAATTTATTTCCCCAAAGTTCTGGCCAAGAGAAGAAGCTGTTTCAGTTCCTTTCTCACTGAACCAACTTCCA AACCTTCTAAATAAATTCTCTTTCCTTCCAATTTCTCCCCCAGCCAAAGCCATGGAAGATACACTGAAGGAAAGTGAGAG CAAACCCATTAAAGGAGAGGTAAAATTCTGTGCTACCTATTTAGAATACATGCTTGACTTCACTCATAGCATTCTTGGAT TGGAATCTGATGATCTTCAAGTTTTTGCTACTTCACACCTAACCAAATCCAGTGTCACTTTCCAGAACTACACAATCTTA GAAAACATCATGAGAATTTCAGCTCCTAAGATGGTGGCTTGTCACACCATGCCTTACGTCCCTTATGCTGTTTTTTACTG CCACAGCCAAGAGAGTGAGAACAGGGTATATAAGGTTTCACTTGTTGGTGATAATGGGGATAAGGTGGAAGCTATGGTTG TTTGTCATTTGGATACCTCTCACTGGGGTTCTGGTCATGTTTCTTTTCAAATTCTTGGGGTTACACCTGGAAGCTCTTCT GTGTGCCACTTTTTCCCAGCAGATAATCTCATTTGGGTTCCCAAATTGCAAGCTCATGGTCTTTCAACCATGTGATTTCA GCTATCATCAAGATTCTCTCATGTCACATAATAATTATGTGTGAAACATTATTATTGTATTTTTCTCTCATTTTATAAAT ACTAGCGTTTTTACCCCGTGCGTTGCACGGCGATTAAGTTTATTGTGTAGATATATATGTAGAATAGTTGTATAACAGAG AATAGGTTCAAATATGTATGTGAATATACCAACTTAAAAATGTTAAATAATAAATGTTGTATAACCCACCAATGTCAACA CATGAACAGTAAAATAAATCCA
CDS sequence (LotjaGi3g1v0507100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGATACACTGAAGGAAAGTGAGAGCAAACCCATTAAAGGAGAGGTAAAATTCTGTGCTACCTATTTAGAATACAT GCTTGACTTCACTCATAGCATTCTTGGATTGGAATCTGATGATCTTCAAGTTTTTGCTACTTCACACCTAACCAAATCCA GTGTCACTTTCCAGAACTACACAATCTTAGAAAACATCATGAGAATTTCAGCTCCTAAGATGGTGGCTTGTCACACCATG CCTTACGTCCCTTATGCTGTTTTTTACTGCCACAGCCAAGAGAGTGAGAACAGGGTATATAAGGTTTCACTTGTTGGTGA TAATGGGGATAAGGTGGAAGCTATGGTTGTTTGTCATTTGGATACCTCTCACTGGGGTTCTGGTCATGTTTCTTTTCAAA TTCTTGGGGTTACACCTGGAAGCTCTTCTGTGTGCCACTTTTTCCCAGCAGATAATCTCATTTGGGTTCCCAAATTGCAA GCTCATGGTCTTTCAACCATGTGA
Protein sequence (LotjaGi3g1v0507100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDTLKESESKPIKGEVKFCATYLEYMLDFTHSILGLESDDLQVFATSHLTKSSVTFQNYTILENIMRISAPKMVACHTM PYVPYAVFYCHSQESENRVYKVSLVGDNGDKVEAMVVCHLDTSHWGSGHVSFQILGVTPGSSSVCHFFPADNLIWVPKLQ AHGLSTM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 157 | 157 | 1.9E-72 | – | |
| PANTHER | 1 | 157 | 157 | 1.9E-72 | – | |
| Pfam | 1 | 157 | 157 | 1.9E-52 | ||
| SMART | 1 | 158 | 158 | 2.6E-22 | ||
| ProSiteProfiles | 1 | 158 | 158 | 52.815 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0507100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…