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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0507900 |
| Transcript ID | LotjaGi3g1v0507900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT1G63850.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9CAJ9|Y1385_ARATH BTB/POZ domain-containing protein At1g63850; TrEMBL-Plants: tr|I1LJD8|I1LJD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0507900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92490995..92495102) extracted from Lotus japonicus Gifu genome v1.2.
CCCGCATTGTGTTATTCTATTTTCCATTTCGATTTCCATTCTCCCAAACACACAAAAATCGTTTCATTTTCCCTCACATT TCTATTATTCCCAGAAATGATTCCGACCACCGGCGTTCCCAAGAAGAGGCAGCGCACCGCCGCTACCCGCCATTCCTTCA CCGCCGCCACCACCACCAACAACAAAACATTCACCCGAAACTCTCCAAGCACCACCACCGGCGACGCCCTCTACTTTAAC GACGCATCCACCGCCGACATCATCCTCCGCCTTTTCATCGACACTGCCGATTCCCCGCTGGAATCCTCCCCCTCCGTCGA GGACTCCGACCTCCACGTATACCTCCACTCCACCATTCTCCGCCGCGCCAAATACTTCTCCGCCCTATTGTCCGACCGCT GGATCGGCCTCGTCCATCCTCATACGTCTTCGCCGGAAAACTCCTCCTCCTCCGGTTCCGATCGCGGCGAACTATTCCGC CTCAACCTCGGAGTTTCTCCCACTCCAGGCTCGATCCAGAACCACCTCACCGTGCTGGAGCTTCTCTACACGAGCGATTT CGCCAACACCGTCAATAACGCCTCCACCGCGCTGGATCTGCTCCCGGTGGCGCTGGAATTGCTGTTCGAGGAGTGCGTTC GCTGGTGTGTAGCGTTTCTGGAAGCGGTGCCGTGGACGGAGGAGGAAGAGAACAGGGTGGTGAGCTTGATCCCTTTCCTG AACGAGGAAGAATCGAAGGAGCTCGTGGCTAGGGTTTCTCCTGTCGGTGAAGATGCATGCGAAGCGATGCTCGAAGGTCT GATCTCTTCGGCGATGAACAATTACCAGAACACGGCGTTCGTGAAGGCGTTTGTGGGGAAGATACTGAGGGATTTGTCGT CGAGGGAAACGGCGAAGAGGGTGTTGGAGAGCGCGTTCAGGAGGAGCTTGAAGACGGTGAAGGAGTCGCTGGAGGATTAT TCGAGCCCTGTGTTCAGAGGGGACCATAATGAGACGGAAGCGATTCAGAGGTTGAATCTGCATAAGGCTTCGACGAATGG GAAGCATCTTCTGTGGTTGGTGGAGAGGATGATTGAGCTGAGGGTGGCGGATGTGGCGGTGCGTGAGTGGAGTGAGCAAG CTCCGTTCACCGCTGATTTGCAGAGGGCTTTCCGTGATGATGCCTGGAGGAACATTGTGCCTGGTCTTCCTGCTGTTATT CTTCGCTGCACCTCTAAGCTTGCTAATGCTGTTTGTGCTGGTACAATTTTGGCTTCTACTCAGGTACCTACTTGCTCATT GTTATTGTTTTTCTGTGTTGTTTCTGATACCTGTGTGTGCTTGAGTGGAGAGTGTGGGGATTGGGGGAATTGGATTTGAA TGTTAAAATAATTTGAATGTTAAGGAATAACTATTTCCAATTACTGGCCTCCTGGGATTGGTTTTGAAAAGTGAACATTT CTTTTATGGTTTGAGACACTGTAAGTTATTATAGGCTTGACTATCTGAGTTGAGCCGGTAGGGCATTGCCTATGTTTGGA CATTGAAAGGGTAGTAGAAGAAAATAGAATATAGGATGGAATGAGTGGAGTGGAGTGAAATGGAGCGGAATAGAATTGTT GTGGTTAGGATCTTGGAAGTATGAACTATCCTATTCCGATAAGACAACTTGAGATTGGATAAACTGGATCGGTTACAATG AAGAGTGGTGGTGTACCTGCATAAAACACTCTGACATGCTTAGTTAAGAGTTTTGGTGCGATTATTATAGAATGATTAAG TATACCTCAATGGGTTAGTTTGATAGATATTCCAGGTTGTTCATACAGTTTCTCATGCGCTAGGCAGTTAAGCTTGACAT GACTGTCTAGCACGTGCGTGATTCTGTGGTGGCTAACCGCCTGGGAATCTTGGCAAAATGTTATATGCTTACGTGTCATT CTTAGTGCGAGCTTGTTAGGGAAGATAACTTATTGGGCTTTGGATTTATGTTGTGGCCTGTTTTGTAGTCTGGGCCTCGA ATTCGCGTAGTTGGATCCCGGTCAGGAATAAATTTATCATCGACATTATTTGAACTTTAATATCAGTTATGCTATATGGT ATGAGTGTATTCTGAACGAATTGTGCAAATTTGATGATGTGTGTGTGCGTTTTAACAAGCAGTCCATCCTAAGAAGGTAA TAGATATTACAGTCTCATCACCCGCTTCGCCGGAAAACATTTGTGTCACAACTCACAACCCTCTGTGCTAAAGTGCTCTC CAATCTCAAAATTTGGAATGAGGCGCATCATCTTTTTCTCTCCAGTCAATGGTTATAGCTTGTTTCATTCATTGAATTGT AATTGATGCAATAGTTGTGATTTCCATTTCAAGTTTAGTACTTGGAAGAGATCGTGGAGTTGATATCTCGTATCTGTACT TAGTTCTTTATGAACCTTATTTTCTTTACATGTGTGCTGGTGGTTTGCATATCTATAAGCTTTTATTGCAGAATCCACGC CATTAAAAATTCAGCGGTGATTGCATTTGTTCATCCTAAAAGGGATTTGTTCAATGCTGGTGCTCAATTTCTTCTCTTTG CAAAAAATCCAAAAATAGGCTGCTTAATTTATTCATTCACAAACATATACCTTTTGTAAGGTGAATTGAATTCCTTATGA CTACAACATTTTAGTGCATACTTGTTTACGGTTTATACAAAATTCAAAGCTATGTTAGCACAAAAGTAACAAAGAGCTGC TGCGGGAGTAGGGGAACGTTGCTAAACCACAAACATACTATTATTTTTATTACCAATATTATGCTTGAGTAGATTGCTTA TATACCTCATTAATGCACAATATCCAAATATTGATTGTTTTCTTCTTTTTCTAATGGTCTTTCCTTTCACAAATGCCCTA GCCCCCGATGCCTTTTTTTTATTTTGAATGAAAGGTTCTGTATGTTTCCTTTTCATTTGAGATTGATTTTTCATTATGTG ATTTTGATGCCTTTATTTTGTAATTTGGTATGCTACCTGCGGCCATATAGTTTGCCCCCCATTTGAAGATTTTCATTTTC ATCAATCCTGATTCATGCTTATTTCTGTTCTGTTCAGGTGAGAAGGAAGCTTGTAGAAGAATGGCTTCCGGTTTTGGTTG TATGCAAAGACAATGTTTCACCAGTATCACCCAGCAACAAGTCATTATATCTAGAGCTGGAAGAAACATTTTTACGAATC ATCTCCACCTTGCCCATGTCAGATGCTCAAGAATTATTGCAGCGGTGCCTCAGCTTTTCAACCCGAAATGTCGAAGATTG TCCTCACTTGGTGTCAGCATTCAACACCTGGTTCCGGCGGGCAGCTCAACCCCTGAAACCAGATTGTCTCTTTGATCAGT GAGATATCTGTTCAGTTCTGTTGCACCATTGTTGGTTGGCTTCACAAATATTGTGCATATGTTTATATACTAACTCTGTT CAGAAAGCTGTAGTTTAACATTGTACAGATGCCTGTCTTTCTAGGACAAACAACAACCCAGATACTTAGATCTTGTTTTG AGGTCTCTGGTTGTTGGCAATGGCTAGTTGGTTCCCTGAAATGCAAGATTTTAGTTGCTTGTATTTCTTAGTTGAAACTT TAAACGATGGTTTGGGAATCAGAGGTCAAAATGAATATACCAGCTTTGATTCGACCCTTTTTCAAATAAAATAGTTCATT CTAAAAATTCTTTTCTTATAAATAAGGTTATCATATGTAACACATGATAGTAAAAAAAATGATCATATGTATAAGTAATA TTTGATATCTTAGCTTCACAATATAGTAAATATAAGTAATAGGAAAACATGACATTATACTTGATTCAATTGTTATACTT AATCCTACACGCTTCTATGGCTCAATAATATTAAAAAAATTGGCTTCTTGTTACGAGAATGCGAAAGATGAAACGCAAGA AAGTCCAAGATTATCTTAATTTTCTAAAGCTTGAATTCTCACAAGTTTGACAATAAGTTCCTTGCAATTTAACTTGTTTT TGTGTCCCACGATCATACCTTAATGAAGCTTTAAGAGTTCAACTTGAGAGCTTTGAAAACCATGATTACGAGATAGCTTA ACATACTGCCTTGTTGACCACATTCAAA
CDS sequence (LotjaGi3g1v0507900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTCCGACCACCGGCGTTCCCAAGAAGAGGCAGCGCACCGCCGCTACCCGCCATTCCTTCACCGCCGCCACCACCAC CAACAACAAAACATTCACCCGAAACTCTCCAAGCACCACCACCGGCGACGCCCTCTACTTTAACGACGCATCCACCGCCG ACATCATCCTCCGCCTTTTCATCGACACTGCCGATTCCCCGCTGGAATCCTCCCCCTCCGTCGAGGACTCCGACCTCCAC GTATACCTCCACTCCACCATTCTCCGCCGCGCCAAATACTTCTCCGCCCTATTGTCCGACCGCTGGATCGGCCTCGTCCA TCCTCATACGTCTTCGCCGGAAAACTCCTCCTCCTCCGGTTCCGATCGCGGCGAACTATTCCGCCTCAACCTCGGAGTTT CTCCCACTCCAGGCTCGATCCAGAACCACCTCACCGTGCTGGAGCTTCTCTACACGAGCGATTTCGCCAACACCGTCAAT AACGCCTCCACCGCGCTGGATCTGCTCCCGGTGGCGCTGGAATTGCTGTTCGAGGAGTGCGTTCGCTGGTGTGTAGCGTT TCTGGAAGCGGTGCCGTGGACGGAGGAGGAAGAGAACAGGGTGGTGAGCTTGATCCCTTTCCTGAACGAGGAAGAATCGA AGGAGCTCGTGGCTAGGGTTTCTCCTGTCGGTGAAGATGCATGCGAAGCGATGCTCGAAGGTCTGATCTCTTCGGCGATG AACAATTACCAGAACACGGCGTTCGTGAAGGCGTTTGTGGGGAAGATACTGAGGGATTTGTCGTCGAGGGAAACGGCGAA GAGGGTGTTGGAGAGCGCGTTCAGGAGGAGCTTGAAGACGGTGAAGGAGTCGCTGGAGGATTATTCGAGCCCTGTGTTCA GAGGGGACCATAATGAGACGGAAGCGATTCAGAGGTTGAATCTGCATAAGGCTTCGACGAATGGGAAGCATCTTCTGTGG TTGGTGGAGAGGATGATTGAGCTGAGGGTGGCGGATGTGGCGGTGCGTGAGTGGAGTGAGCAAGCTCCGTTCACCGCTGA TTTGCAGAGGGCTTTCCGTGATGATGCCTGGAGGAACATTGTGCCTGGTCTTCCTGCTGTTATTCTTCGCTGCACCTCTA AGCTTGCTAATGCTGTTTGTGCTGGTACAATTTTGGCTTCTACTCAGGTGAGAAGGAAGCTTGTAGAAGAATGGCTTCCG GTTTTGGTTGTATGCAAAGACAATGTTTCACCAGTATCACCCAGCAACAAGTCATTATATCTAGAGCTGGAAGAAACATT TTTACGAATCATCTCCACCTTGCCCATGTCAGATGCTCAAGAATTATTGCAGCGGTGCCTCAGCTTTTCAACCCGAAATG TCGAAGATTGTCCTCACTTGGTGTCAGCATTCAACACCTGGTTCCGGCGGGCAGCTCAACCCCTGAAACCAGATTGTCTC TTTGATCAGTGA
Protein sequence (LotjaGi3g1v0507900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIPTTGVPKKRQRTAATRHSFTAATTTNNKTFTRNSPSTTTGDALYFNDASTADIILRLFIDTADSPLESSPSVEDSDLH VYLHSTILRRAKYFSALLSDRWIGLVHPHTSSPENSSSSGSDRGELFRLNLGVSPTPGSIQNHLTVLELLYTSDFANTVN NASTALDLLPVALELLFEECVRWCVAFLEAVPWTEEEENRVVSLIPFLNEEESKELVARVSPVGEDACEAMLEGLISSAM NNYQNTAFVKAFVGKILRDLSSRETAKRVLESAFRRSLKTVKESLEDYSSPVFRGDHNETEAIQRLNLHKASTNGKHLLW LVERMIELRVADVAVREWSEQAPFTADLQRAFRDDAWRNIVPGLPAVILRCTSKLANAVCAGTILASTQVRRKLVEEWLP VLVVCKDNVSPVSPSNKSLYLELEETFLRIISTLPMSDAQELLQRCLSFSTRNVEDCPHLVSAFNTWFRRAAQPLKPDCL FDQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 27 | 473 | 447 | 6.0E-182 | – | |
| PANTHER | 27 | 473 | 447 | 6.0E-182 | ||
| CDD | 144 | 188 | 45 | 0.00712166 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0507900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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