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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0510400 |
| Transcript ID | LotjaGi3g1v0510400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF241 domain protein; TAIR: AT2G17080.1 hypothetical protein (DUF241); Swiss-Prot: sp|Q96CN4|EVI5L_HUMAN EVI5-like protein; TrEMBL-Plants: tr|B0BLH6|B0BLH6_LOTJA CM0216.280.nc protein; Found in the gene: LotjaGi3g1v0510400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92758398..92759895) extracted from Lotus japonicus Gifu genome v1.2.
CTGCTGAGAAGCTTGCTAATGTGTACAACTAATTCAATCTGTTCAATACTTCATTTATAACCAATGTGATTCTTATGATT CCACTCACGCAGCTCATGATCTACACATTAAAGGTTATTCTATTTGAAAAAAAATATTTGTATGTGTGCATTAATTGCAA TGAAGATAGACCTTGCAATGCCACTCGTGAGTTGAATGCACATTGAGAACACCAATAAGATTGCTGCAAGGTGTTAAGAG AAAAATACAAGAACTGAGTTGGAGTGTTCCTGTGCAAGAGACATTGCATTAACATTACTGAGATACTGTGTAGATCTGAA TCTAAATCAGCCCTCATGGATTTTTGTCCATATTTGATTCCTTCTGTCAACTGAACTCACAATATATATTGAACTACTCT CAAAACAAAGAAGGTAGATCCAAAGACTCATTGGAAAGCCATTCTCTTCTCTAGTAAAATGTCATCAACATCTCATCACC AACCTCGCTCGAAGAGCTTGCCATGTAGACCACACCCTCTCATTCTACAATGCAATCAACACTTGGGAAGTTTAGAGGTT TCAGATGAAATTTCCTCTTCATCATCATTGTTCAGCAACAAACTAACCAATCTGCAGACTTTGTATGATTGTGTTGAAAA GCTGGTCCTTCTGCCACTTACTCAAGAAGTCGTGGCTCGAGAGCGCCAAGAGAAATGGGTAGAGGAGCTTTTGGATGGAT CTCTAAGGCTCTTAGACGCGTGTTCCGTAGCAAAGGATGCTCTTCTTCATACAAAGGAATGCGCACGCGAGCTTCAATCA ATCATGAGAAGAAAAAGGGGAGGCGAAATGGAGGTAACAGCTGAGGTGAGAAAATTCTTGGCCTCTAGGAAGATAGTTAA AAAGGCAATCTCCAAAGCCTTGGAGAATTTGAAGGCTTCTTTGAAGAAAGGAAAATTCTCTCCTAGCAACAAGGACCATC AAACCACCTCCTTAGTTAGCCTGTTAAAGGATGTGGAAGTGATCACTCTTTCCATATTGGATTCACTCCTGATCTTCATC TCTGGACCAGCTCAATCAAAACCAAGTTGGTCTTTGGTTTCCAAGCTAATGAAAAATAAGAAGGTTTCTGGCACACAAGA AGCAGATCAGAATGAATTTGCCATTGTAGATGCTGCATTGCAGTCTTTTGCGTTTCAAATGACGAGGAAGTCCGGCAACA TCAATCAACTGCAGAACCAGTTGGAAAATTTGGAGTCAGTCATTCAAGACTTTGTGGAAGCACTTGAAACTCTTTTCAAA CGATTTATTAAAATTAGAGTTTCCCTTCTCAACATTCTCAATCACTAGTTGTACAAATCCAGATGAATGTTTTGTAATTA TGTCAATGAAATTGACTTCTAATTTAGTGTTGAATGAAAATTATTCTCTACCTGGCTTGCTTTTTTCTATTACAAGGATT AGTAGTTATTAATGGTGTGCTTTTATGCATCATTTTGTACAGTTAGTGAAGTGCTTAT
CDS sequence (LotjaGi3g1v0510400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCATCAACATCTCATCACCAACCTCGCTCGAAGAGCTTGCCATGTAGACCACACCCTCTCATTCTACAATGCAATCA ACACTTGGGAAGTTTAGAGGTTTCAGATGAAATTTCCTCTTCATCATCATTGTTCAGCAACAAACTAACCAATCTGCAGA CTTTGTATGATTGTGTTGAAAAGCTGGTCCTTCTGCCACTTACTCAAGAAGTCGTGGCTCGAGAGCGCCAAGAGAAATGG GTAGAGGAGCTTTTGGATGGATCTCTAAGGCTCTTAGACGCGTGTTCCGTAGCAAAGGATGCTCTTCTTCATACAAAGGA ATGCGCACGCGAGCTTCAATCAATCATGAGAAGAAAAAGGGGAGGCGAAATGGAGGTAACAGCTGAGGTGAGAAAATTCT TGGCCTCTAGGAAGATAGTTAAAAAGGCAATCTCCAAAGCCTTGGAGAATTTGAAGGCTTCTTTGAAGAAAGGAAAATTC TCTCCTAGCAACAAGGACCATCAAACCACCTCCTTAGTTAGCCTGTTAAAGGATGTGGAAGTGATCACTCTTTCCATATT GGATTCACTCCTGATCTTCATCTCTGGACCAGCTCAATCAAAACCAAGTTGGTCTTTGGTTTCCAAGCTAATGAAAAATA AGAAGGTTTCTGGCACACAAGAAGCAGATCAGAATGAATTTGCCATTGTAGATGCTGCATTGCAGTCTTTTGCGTTTCAA ATGACGAGGAAGTCCGGCAACATCAATCAACTGCAGAACCAGTTGGAAAATTTGGAGTCAGTCATTCAAGACTTTGTGGA AGCACTTGAAACTCTTTTCAAACGATTTATTAAAATTAGAGTTTCCCTTCTCAACATTCTCAATCACTAG
Protein sequence (LotjaGi3g1v0510400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSTSHHQPRSKSLPCRPHPLILQCNQHLGSLEVSDEISSSSSLFSNKLTNLQTLYDCVEKLVLLPLTQEVVARERQEKW VEELLDGSLRLLDACSVAKDALLHTKECARELQSIMRRKRGGEMEVTAEVRKFLASRKIVKKAISKALENLKASLKKGKF SPSNKDHQTTSLVSLLKDVEVITLSILDSLLIFISGPAQSKPSWSLVSKLMKNKKVSGTQEADQNEFAIVDAALQSFAFQ MTRKSGNINQLQNQLENLESVIQDFVEALETLFKRFIKIRVSLLNILNH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 289 | 285 | 3.8E-121 | – | |
| PANTHER | 5 | 289 | 285 | 3.8E-121 | – | |
| Pfam | 48 | 286 | 239 | 2.0E-77 | ||
| Coils | 241 | 275 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0510400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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