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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0511500 |
| Transcript ID | LotjaGi3g1v0511500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | V-type proton ATPase subunit E; TAIR: AT3G08560.1 vacuolar H+-ATPase subunit E isoform 2; Swiss-Prot: sp|Q9C9Z8|VATE2_ARATH V-type proton ATPase subunit E2; TrEMBL-Plants: tr|I1LJA5|I1LJA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0511500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92873522..92875205) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGGACGCAGATGTGTCGCAGCAGATCCAGCAGATGATCAGGTTCATCCGCCAAGAGGCCGAGGAGAAAGCCAATGA AATATCTGTTGCGGCGGAGGAGGTTTGTCTATACTCTTTTTGGCCCTAACACATACATCATATAATCATGTTCAAGTCAG GAAATCCACTTGTTGGTGGAGACTCGAACCAGAGATCTTACTTAAAAAGAATCAATAATGTATCATTTGAATCAACCACA CATATGTTTATACATTCATACACAAACACACATGCATTTTCTTCCTAAATAGACACAATTGTTATCATCGTTTGTGCTAC ATTTTGCAGCATATTATAGTAATAAATAACAATATCAATGCAATGGTGAGTTACCCTTATGAAATTTGACTAATTATCAC TCATTATTTCATAAGTAGGAGTTCAATATTGAGAAACTTCAATTACTTGAAGCTGAGAAGAGAAAGATCAGACAAGAGTA CGAGCGAAAAGCCAAACAAATTGATGTTCGTAGAAAGATGTGAGTTCATATAATTTTGTTTCTTTTTCACAAGCCAAGAT TGATCACAAATTAATGAATGAAACATTTATTTGCATATGAGCAGTGAGTACTCAATGCAGCTGAATGCATCCCGTATAAA GGTTCTCCAAGCACAAGATGAGCTGGTGAATTCTATGAAGGATTCTGCTAAAAAGGGCCTTTTACGCATCTCAAATGATA AGAAAGCTTACAAGAAACTCGTCAAAGACATGATCGTTCAGGTAGTTTAAAAATTATTTGACTAATTAATTTATAAGCTC TTTGGAGACGTTTCCGGAAGGAGCTTACTTCACTAGCTCATAACGTTTATTAAAACGACATCAAATAACTTATAGCCTAG AGATTATAGCTTTCTTTCACAAACAAATTGTTGTTGCAGGGTTTACTACGGCTGAGGGAACCATCAGTGCTACTAAGATG CAGAGAGGGTGATCGAAAGCTAGTAGAGTCTGTGCTCGATGAAGCGAAAAAACAATACTCCGAGAAAGCCAACATGCAAG CCCCAAAGGTTACCCTTGATGATCGTGTTTACCTCCCACCACCTCCTAAAAACGGTGCAACGGATTCACATGAACCTTTT TGGTATCTCCACTTAACTCTGCTGATGTAAATTTTGATGAAATGACTCTCAAATTACTTCCTAATGTTCGTTTGATTTGT TTATCTGATAGTTTTACTAACGCTTAATTAAGTTTGGAAGAATGAGAAAGTAGTATTACTAATTAACACTCAATTAAGCT CTTGATTATGACTTGCTTTGTATGCGTGGTTAATTTTGTTTATGAAGCTCCGGAGGAGTGATATTGGCTTCTGAGGATGG GAAGATAGTGTTGGAGAACACCCTTGACGCACGTCTTGATGTCATTTTCCGCCAAAAATTGCCCGAGGCATGTTCATTAT CACACACTCCTTCTATTCATTTTGTTGCATGCATGTTTGGATACACAACGAAAAATCACGAAGAAATCCAAATCATAGTG GACAACCTCAAAAGTTAAGAGAAGTTGTTTATATCCACCGTAATTTTGACTCATTGTGTAACCAAACATGCCCTCTGTTG GATTGACAACATTTGACTTGTTAAGGTTACTAATTGTTTTACTCAATCAAGTACATGCAGATAAGGAAGCACTTGTTAGG TTGA
CDS sequence (LotjaGi3g1v0511500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGACGCAGATGTGTCGCAGCAGATCCAGCAGATGATCAGGTTCATCCGCCAAGAGGCCGAGGAGAAAGCCAATGA AATATCTGTTGCGGCGGAGGAGGAGTTCAATATTGAGAAACTTCAATTACTTGAAGCTGAGAAGAGAAAGATCAGACAAG AGTACGAGCGAAAAGCCAAACAAATTGATGTTCGTAGAAAGATTGAGTACTCAATGCAGCTGAATGCATCCCGTATAAAG GTTCTCCAAGCACAAGATGAGCTGGTGAATTCTATGAAGGATTCTGCTAAAAAGGGCCTTTTACGCATCTCAAATGATAA GAAAGCTTACAAGAAACTCGTCAAAGACATGATCGTTCAGGGTTTACTACGGCTGAGGGAACCATCAGTGCTACTAAGAT GCAGAGAGGGTGATCGAAAGCTAGTAGAGTCTGTGCTCGATGAAGCGAAAAAACAATACTCCGAGAAAGCCAACATGCAA GCCCCAAAGGTTACCCTTGATGATCGTGTTTACCTCCCACCACCTCCTAAAAACGGTGCAACGGATTCACATGAACCTTT TTGCTCCGGAGGAGTGATATTGGCTTCTGAGGATGGGAAGATAGTGTTGGAGAACACCCTTGACGCACGTCTTGATGTCA TTTTCCGCCAAAAATTGCCCGAGATAAGGAAGCACTTGTTAGGTTGA
Protein sequence (LotjaGi3g1v0511500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKDADVSQQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAKQIDVRRKIEYSMQLNASRIK VLQAQDELVNSMKDSAKKGLLRISNDKKAYKKLVKDMIVQGLLRLREPSVLLRCREGDRKLVESVLDEAKKQYSEKANMQ APKVTLDDRVYLPPPPKNGATDSHEPFCSGGVILASEDGKIVLENTLDARLDVIFRQKLPEIRKHLLG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 228 | 228 | 3.9E-128 | – | |
| PANTHER | 1 | 228 | 228 | 3.9E-128 | – | |
| Coils | 7 | 34 | 28 | - | – | |
| Hamap | 8 | 228 | 221 | 12.24 | ||
| Pfam | 16 | 226 | 211 | 1.1E-67 | ||
| Coils | 38 | 61 | 24 | - | – | |
| SUPERFAMILY | 87 | 227 | 141 | 1.23E-27 | – | |
| Gene3D | 91 | 228 | 138 | 1.8E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Proton-transporting two-sector ATPase complex, catalytic domain | A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled. | ||
| Molecular function | Proton-transporting ATPase activity, rotational mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of LotjaGi3g1v0511500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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