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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0516300 |
| Transcript ID | LotjaGi3g1v0516300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Auxin-responsive family protein; TAIR: AT4G38840.1 SAUR-like auxin-responsive protein family; Swiss-Prot: sp|P33080|AX10A_SOYBN Auxin-induced protein X10A; TrEMBL-Plants: tr|I1LPV6|I1LPV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0516300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93360270..93368279) extracted from Lotus japonicus Gifu genome v1.2.
TTGATACTTCAGTTTGGTAAAAATGAATCTTAGCTTTAGCCTAGCTGTGAATCAAGTATTCATTTCTGCTGCGGAATTTA TGAGAACAATCAAGTCTGATTTTTTTTCCTCTTAACAATTTAGTAGCTGAATTATTGAGATTAGAGTCTTTACACACAAA AATAGAGGATTAACTTTTCCAATTTGTAATTCAGATAGTAATTGTTTCCCCATTTCAGATTAAAGGGGTAATCTTTACAT GTCAAGAATATGCCTATTGTACAAAATTTCTCCACTATCCTATGTCAGTCTCCTACATAGTGAGATTTATTGCCCATTCA AGCAAGAAGTTATGTGTTGGAAGAGATCTTCGCTGCAAGGAATTGTGAGGCCGCCCATGGGATGATCATATCCAAACTCT TCCTCAGCTTGATTCAGCAAATCTTGAAATGAAGGTTGGTTCAAGTATGATATGGGGATCACAAACCGCTTTTGTTTTTC TCCAACATACACTGCAACATGTCCCTTTGGCACTTCTAAAGATTTTGAAGCTGCTTGGCCAGCGAAGGATGCCCGTCGAA TAGCAGGTATACGGAAACCCATTTTTTGTGCTTATTTGAAGGAAGAGCAAAACACAAGATATCAAATTTTTGAGAAGATT GTGTTCTAAATACTTGAGGAGGCCAATGACTTGTGCTGTTTGTGAAGGCCAGAGGAGTGTATTTATAGTGTTTTAGGGTC TTTGAAAAACCAATTCTAACTAAAATGATTGTTAAATGATGGAGTGAAACCAATGAGATATCAGGTGGTGTTGTCTTAAG ATTGTGCCCACCTTCTAAAATAATGGCCAATATAAAGCATCCAGCTGTAATGTTTGTTCATTCATTTATGGAGGCTCCAT ATTTTTGTAAACATGCTTTAGACATGTTTTCTACACTTCGATAGCAAATATTAATGTTGATGTACATTTGGTAAGTTTTA TCTGCCAGACAAATTGTAAGGCAGAGGATAACTACAGAGTCTATTCCTGATGTTTGTGATCATACATCTGTTTTATTTCA AGTGAACTAATTATGTTGGCCTAATCTCAAGAAGCTGGGGCTTGTGATATCTACTATAACATGTGACAGTGATCCTTTAG AAAATCCTCTAAGACAACACCATGTGACCTTTTATATGCCTTTGTCTGCCATAGGTCCCATGACTCTCATCTCATTATCC TCCTTCATTGATCATTCAAGTAGCCAACAATTTGTTTCATATCTTTTTATCTATATATATTCATGGTTGAAAGCACTTAG GACCAACACAAATCCTTCAAGGCATTGGAAATTCAAAGCGTGCATCTTATATACACATCTTTTTAAAACCAGTCTCTTCT TAACACATACAATACAACAATGGGTTTTCGTTTACCAGGTATCAGAAAGGCATCATTTGCTGTAAACCAATCCTCTGCAA AAGCTGTGGACGTGCCAAAGGGCTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGAGGTTTGTGATCCCCATATCATAC TTGAGACAACCTTCATTCCAAGACTTGCTGATTCAAGCTGAGGAACAATTTGGATATGACCATCCAATGGGTGGTCTCAC AATTCCTTGCGATGAAGACATGTTCTTAGATATCACTTCTCGCTTAAATAGGTGATAACCCTTTGGGGAGAAGATCCTGA CTTAGATTATTTGAGATAGTTTTGTACAGCAGACACTTCTTTTTCATTTTAATCTGCCTTTGTAAGCAGAGAAAGGCCAT TGGATTGAAATAGTTATGGACAGAGAGAATGTAACATGTTTTAATTGATATTGTAAACTTTTGTGCCAAAATATAACTCA AGAGACTGAATAGTCTTCCATTTGCTCTTCAAAGTTATTTTCCTTTGCGTTGCTTCCCTTAATGGACTGTGGTGAGAAAT TTATATAACCACTTTGGTGGTACAACTAGATCCACTAGTAGTTTCTCTTTGTTGTGCCCCCTGCAATGCATATGCTGGTT ACATATATCCTTCACTGATTTGATGATGTCCAATATAGATTATTAGATTTTTGCATAAAAGTAGATTTCCCTAATGTTCC AGAACACCATACTTCTTATTGATACTAATTATTTGATGATATGATCTGCTTGTCTGATTATTGTTTGTGAAATTTAGTTA AACCAGCTTGAGTTATCCTCTCATGTACAAAATTGACAATAAATCTGAGAGGAGCAAGTGGAACTGTATTTGATGATTTG CAAAGTATTTTTCTTTAGGACCTTTTAATCATTCTCCTATTCCTGAACTCTTGAAGAGTGAATGTTACCTATCTTTTACT TCCAAACTTGATTGTCTATTCTGCTTTTGGATAAAAAACAGTTTGATTGGAATGTTAACTAGCCTTTAATGTAAATAGTT AGCTTATGAACATCCTTTTCCTCCTTTAATGGATGATTAGGATTCAATTTTTTTTCTTCCACAAAAGAAAAAAAAACAAT ATCTTCAAATGATTTAAGTTTTGGACATTATTCAATCAGAGAAGGACCAGTCACTTGTCACCAGAATATAGTTTGTTGTG GCACTAAAACAGAAAACAAGCTCATGTGAAGATGTTGCTTGAATCAATTGAAATATCACCTGTGATGAGGAAACAGGGCC TCCCTCATTTATGAAACAGAATCATGCCATGGCAGAGAACAGCACTTAATTTTTGCTCAGCTATGACAGCTCCACAAATC TTTAAAGAGGGCACACATATGTAAGAGAATGGCTGTCTCAATATGACCTATTTGTAAGCTGTTTTGAGCTTATTATCATA AGTTGTTTAGATTAAGTTATGAATAAGAGTTTATGCTTACATGTAACATATTTTCAGCTTATTTCATAAAGTTTCTCAAA TTAGATTATTAATAAGCACTTATACGATATACACTTTTTCCTGCAAGCGCTTAATTAAATAATTTACCCAAACACTTCAT TCCTAATAATACTATTTCAAAAGTGTGTGCATAAAATTAAAAAATCTTTTAATCCCGTCCCAAATACACTAATGATTGAT ACTCCTCTTTCTGCCTAGGAAGAATAATTTTAGCTCTGCCCTGGCAGTGAATCACACATTCATTTCTAGTGTTAGTCGTG TGGAATTCATGATAACAATTAAGTCTGATTTTCTTTCTTCCGTTTTTTTTAACAGAATGTAGCCTTGCTACTGTATAGGG CCTAGTTGCAGGGAAAAGTGAAAAATGTAATTGATAAACAGAAAGACTTGGTAGCTGAGTTCATTGTAATTCAGACGGTA AGTTTTTCCCATGAAAAGGGTAATTTTTACAAGTTAAGAAGATGCCTATTGTACAAAATTTCTCTCCTAATCTATGTCAA TAAGCTATAGTGAGAGATTTAGTATTAGTTCCCATGCAAGCAAGAAATTACATGTTGGAAAACATCTTCTCTGCAAGGAA TTGTGAGGCCACCCATGGGATGATCATATCCAAACTCTTCCTCAGCTTGATTTAGTAAGTCTTGAAATAAAGGTTGGTTC AAGTAGGATATTGGGACTACACACCGCTTCTGTTTCTCTCCAACATACACTGCAAGATAGCCCTTTGGTACTTCAAAAGA TTTTGAAGCTGCTTTGCTAGCCGTGAATGATGCCCGTCGAATAGCTTGTAAATGGAAACCCATGTTCTGTGCTTGTTTGA AGGAAGAAGAGCAAAGCAAAGATCTCAGATTCAAGCAGATATTGAATCTAAATACTTGAGGATCCAATGATTTGTGTTGT TTGTGAAAGAAAGATGTGTATTTATAGGATTTTAGGTTCTTTGGAAACCCAAGTCTTAGAGAAATAATTGTTGAATGATG GAGGGCCTCCTAAAGTGATATCAGGTGCTGTTGTCTTAAGATTGTTTCCCACCTTCTCAAACAATGGCCAATATGAAGCA TCTACCTGCAATGCTTGTTCATGCATTAATTGGGACTCCATATTTTTGTAAACATGCTTTAGACATGTTTTCTACACTTT GATAGCAAATATTAATGCTGATGTACATCTGGTAAGTGTCATCTGCCAGACAAATTGTAAGGCATAGGATAACTACCGAG TCCATTCTTGATGTTTGGGATCATACATCTGTTTTATTTCAAATGGATTAATATGCTGGCCTTCACTCAAGAAGGTGGGG TTTGCAATATCTATTATAATAGTGACAGTTGATCTCTTAGAAAGTCCTCTAACCATGTGAACATTTATATAGCCTTGTCT CCCTTAGGTCCCATGACTCTTATCTCATTGGCCTCCTTCATTGATTATTCATGTAGTCGACAATTTGTTACATATCCTTT CATCTATATATATTCCTGGCTGCAAGCACTTAGGACCAACAAAAATCTTTCACGTCTTGAGCCATTTGAAATTGAAAGCC TGGATCTTATATACACTTCTGTTTTGAGCATTTGAAATTCTAAGACCAGTCTCTTCTTAACACATACAACAATGGGTTTT CGTTTACCAGGTATCAGAAAAGCATCATTTGCTGCAAACCAAGCCTCTTCAAAAGCTGGTGATGTGCCAAAGGGTTTCCT TGCAGTTTATGTTGGAGAGAAAATGAAGAGGTTTGTGATCCCCATATCATTCTTGAGTCAAACTTCGTTCCAAGACTTGC TGATCCAAGCTCAGGAGCAATTTGGGTATGACCATCCAATGGGTGGTCTCACAATTCCTTGTGGAGAAGACATGTTTTTA GAAATCACTTCTCGCTTGAATAAGTGCTAACCCCTTGGATGGAAGGAGCTAACATACATTATTTCAGGCTATTTTGTATA GCAGACACTTCTTTTTTTTTTTCCATTTTAGTCTTTCCTCATAAGCAGAGAAAGGCCATTTGAGTTAGATACTTAAGGAC GCAGAGATTAACATTTTTAGTCGAATTTCAATTTATTGATATTGTAAATTTTTATGCCAAAATATAACACGAAGAGACAG ATTAGTCTTCCTTTTGCTCTTTATAATAATTTTCCTTTTCAGTGCTTTCACTACTGTTGTACAAACAAAATCTAACTTCT AATGGACGCAGTAAAAAAATTATATAACCCCTCGACCCACACCATATTTGATGATTTTATCTGCAAAATAGTTTATTGTT TGTGAACTTCTGTAAAACCATAATCTTTTATTTTAAAGTCCTGTGATCCTGCTTGAGTTATCCTCTCTTGTGCTCAATAG ACAATAAATTTGAGAGGAGCAAGTGGAAATTGTGATAGTTTCTACTGTATAGAAAAGCAGAGCTGTTCTCCATTGAAATG AGTGGTTGATGAGCTATTTTGATGGGGTCTAGTGGGAGACAAGGGTTAATGAGATATCACATGTTCTTGTTTTCAAGGAT TGATTGTGATTTCAGAAGTCATTACAACACGGTAGCGAACTATAGAAAGAGACATTTCCAGCAAAAAAGCTAATAATTGC ATAAAATCTTCATATAGATAGTGTAATGTTTCTCGAAATCTGATCTATAAATAAAACCATGATTTCTAGTGATAGCTATC AAATATTGGAAATTGGGTTGGAGATAGGAAGACCACATATTCTAACAATATCCTAACTTCATTGATACATGGTAGAAATG ATTGAAATGTAGTTCCAGATTGGAGCTAACCACATTATTGGTCACTAAAACATCATATGTATATTAATTACCCTTTGGCC ACTGAGTTTATTAGGATGAGAAAATCTGTAGATCAACTGTAGATGGCGTAATTAAGCATTATTAGCACAAAAATATGACA AATAAAACACTGACCATTGAATTTTGGAAATTTAATGCATGCCTAAATTTTCACTAAAGAAATAAGAGAATCTACAGGTC TGTAAATCATGCCTCAAAGGAATGACATATTAATTTAGCTATAGATGCAATCCAATATTGAAATTACTAGAAATCATTAA GCTTTGATTTTATGTCCATTGCTACCTGCCTTGGAAGTTGTCAGTATGACTGGGGCCATGATCATTACATATGTGACTAA AATTCAAAAATCTTTTAATCTCAGTCACATATAAACTGATGCTTGATACTTCAGTTTGGTAAGAAATAATCTTAGCCTTT AGCCTTGCTGTGATTCAAGTATTCATTTCTTCTGTGGAATTTATGAGGACAATCTTGGTTTTCTTTTCTTAACAAATGAT ACTTCTGCAAAATGAACTAACTAAGAGAAGTGAAAATCATAATTGATAAAATCATTAGTCTTTACACAAAAATTTAGAGG ATTAACTTTTTCCAATTTGTAATTCAGATAGTAATTGTTTCCCCATTTCTGATTAAAGGGGTAATCTTTACATGTCAAGA AATGCCTATTGTACAAAATTTCTCCACTATCCTATGCCAGTCTCCTACACAGTGAGATTTATAGCCCATTCAAGCAAGAA GTTATGTGTTGGAAGACATCTTCGCTGCAAGGAATTGTGATACCGCCCATGGGATGATCATATCCAAACTCTTCCTCAAC TTGATTCAGCAAATCTTGAAATGAAGGTTGGTTCAAGTATGATATGGGGATCACAAACCGCTTTTGTTTTTCTCCAACAT ACACTGCAACATATCCCTTTGGCACTTCTGAAGATTTTGAAGCTGCTTGGCCAGCGAAGGATGTCCGTCGAATAGCAGGT AAACGGAAACCCATTTTTTGTGCTTATTTGAAGGAAGCAAAAAACAAAGATATCAAACTTTTAAGAAGATTGTGTTCTAA ATACTTGAGGAAGGCCAATGACTTGTGCTGTTTGTGAAGGCAAGAGGAGTACTGTATTTATAGTTTTTTTTAGGGTCTTT GGAAACCCAATTCTAAGTGAAATTATTGTTGAATGATGGAGTGCATACCAATGAGATATCAGGTGGTGTTGTCTTAAGAT TGTACCCCACCTTCTAAAACAATGGCCAATATAAAGAATCCACCTGCAATGTTTGTTCATGCATTAATTGGGACTCCATA ATTTTGTTAACATGCTTTAGACATGTTTTCTACACTTCGAATGCAAATATTAATGCTGATTTAGAGCTGGTAAGTGAAAT CTGCCAGACAAATTACAAGACATTGGATAACTATAGAGTCGATTGTGATCATACATCTGTATTATTTCAAGTAGATTATA ATGCTGGCCTTCGCTCAAGAATGTGGGGCTTGCAATATCTACTATAACATGTGACAGATGATCTTGTAGAAATTTCTCTA AGACAACACCATGTGACATTTTATATGCCCTTGTCTTCCTTAGGTCCCATGACTCTCATCTCATTGCCCTCTTTCGTTAA TAATTCAAGTAGCTGGATATTTGTTATATATCATCTATATATATATATATATCCATGGCTCCAAGCACTTAGGACCAACA CAAATCATTCAAAGCATTGGAAATTCAAAGCTTGAATCTTCTATACACATCTTCTTTTGGACACATCTCTTCTTAACAAA TACAACAATGGGTTTTCGTTTACCAGGTATCAGAAAGGCATCGTCTGTTGTAAACCAAGCATCTTCAAAAGCTGTAGACG TGCCGAAAGGTTATCTTGCCGTTTATGTCGGAGAAAAAATGAAGAGGTTTGTGATCCCCATATCATACTTGAGGGAAACT TCATTCCAAGACTTGCTGATTCAAGCCGAGGAACAATTTGGATATGACCATCCAATGGGCGGTCTCACAATTCCTTGCCG AGAAGACATGTTTTTAGATATCACTTCTCACTTAAATAGGTGAAAACCCTTTTCGGTAGAAGAACCTGACTTAGATTATT TGAGAGAGTTTTGTACAGCAGGCACTTTCCTTTTTTCATCTTAATCTGCCTTTGCAAGCAGAAAAGGCCATTTGAGTGAA GTAGTTATGGACGGATAGATTGTAACATGTTTTAGTCAAATTTCAATGAATTGATGTTGTTAACTTTTATGCCAAAAGTA TAGATATAACAGACGCAAAATAGTCTTCCATTTTCTCTTCAAAGTTATATCCATGAATTTTCGCATGGATACTTGAGTTT GAGGAAACCA
CDS sequence (LotjaGi3g1v0516300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGATCACAAACCGCTTTTGTTTTTCTCCAACATACACTGCAACATATCCCTTTGGCACTTCTGAAGATTTTGAAGC TGCTTGGCCAGCGAAGGATGTCCGTCGAATAGCAGGTATCAGAAAGGCATCGTCTGTTGTAAACCAAGCATCTTCAAAAG CTGTAGACGTGCCGAAAGGTTATCTTGCCGTTTATGTCGGAGAAAAAATGAAGAGGTTTGTGATCCCCATATCATACTTG AGGGAAACTTCATTCCAAGACTTGCTGATTCAAGCCGAGGAACAATTTGGATATGACCATCCAATGGGCGGTCTCACAAT TCCTTGCCGAGAAGACATGTTTTTAGATATCACTTCTCACTTAAATAGGTGA
Protein sequence (LotjaGi3g1v0516300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGITNRFCFSPTYTATYPFGTSEDFEAAWPAKDVRRIAGIRKASSVVNQASSKAVDVPKGYLAVYVGEKMKRFVIPISYL RETSFQDLLIQAEEQFGYDHPMGGLTIPCREDMFLDITSHLNR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 36 | 122 | 87 | 5.8E-44 | – | |
| PANTHER | 36 | 122 | 87 | 5.8E-44 | – | |
| Pfam | 45 | 120 | 76 | 1.4E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to auxin | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus. |
Expression pattern of LotjaGi3g1v0516300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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