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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0519000 |
| Transcript ID | LotjaGi3g1v0519000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein POB1; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|I3S030|I3S030_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0519000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93549445..93552163) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAAAAAGAAGATCTAGTCCCCTGATACTGATACTGATAGCACAAGGGTGTGTCAAACTCTCTCTCCCCTTCCCTTA TATAAGCCCTCTCCACCTCCATCTTTGTTCTGTTTCAATTCTCATCTTTTCGTTAACTGGTGATGGAGTCTGAGTTGTCC CCTGCTCATGGTGTCTCTTCCTCCGTCAGGGTTCTCCGGATTGAGATCGTGTCTGACCCGCCACCTAATTCAGACATCAA AAACGGTTCTTTACTCTCCCTCTCTCTCCGTTCATGGGATTTATTTTTCTGTTATAAACCTAATTCTTGTGATTTTCGTT CATTCTTCACTGGTATTAAATATTAAATAATAATTGTTTGGTTTGGTTGACAACTTGTGTTTTTATTATAAAACCCAATT TTTAACTCTTGTTTTCCATTAGAGCTAGAGGGGTATGGTACCAAATGTTGTAATTTTGAGTCTGTTATGAGAAATATATA TATATATTTTGCATACATAGATAGAACCTAGTAAGTGATTCTGATGGATTTTGCATGGATGGGGTGTGTTTGTCTAAAGT TTGCTGATTTGTTCAACTTGTGTAAGTGATTCTGATGGACCATGGATTGCTCTGCAGCTACAGTTGCCAGAGTTAGAACA CTGCGTATCAAATCTCGTATGCTGGCTACTAAAAGCCCTTTCTTCTATAAGGTAGATGAACACCTCTTCTTTATAGATTA TTAATATCTACTTCTGCCAAAAATAACATTTTTTATTTTCTTTTTGCAGCTTTTCTCAAATGGGACGACTGGATCAGAGC TGAAACATGTCACCCTCAGGATTAATGCATCTGGTAACTTTTTATATCCCTCATCATTTTAGTTTTCATCAAATAGTCAC CTAAATGACATATTTCTTTTGCATTATAGAAGAAGCTGTTCTCATGAAGCTATTGAGATTTATGTGCAGCAATCCCTTGA ATGCACCACCTGTTTTGTATAAATTTGAAGTCTCTTCATGCCGTAGCCAGTTATTGCCAAATTTGCCCATGGCACCTGAC TCTCCATTACTTTACGTGGAGCTTCCTCATACCATCTTAATGGCTGATGCTGCCAAGCAGTATCTTGCTGGCCAATACAA GGATTTAACCAAGTAAGTTAATTTGAGTTGCATTATCTTAAGTTTTTCTTCTATTAAGTTATTTCCATGTATCTTCTTGG AGACAAGAGGGACTGGAGGAACAAACCATACTGATGTGCGTTTGTGTGTGTTGCATCTAATGTTTGAATCTTGGCCGGTG ACTTTTATTTCTTTGTCATTCAACTTCATGTTATAAATATTTGAGAGGCCTTCTCTATTATGGCATTCCATGGAGTGTCT TTTGAAAAACATCTTTTTTTTTTCTCTTCCATTATTGACAAAGACTTATTTCTTTTGTTGTCATTCTTCATTGTTTTCAT CTCAATGTCATCTTCCTTTTTTTAACGCTAATAATATGTGCAGGTTCAAAGAAGAGGTTATGGCCCTTCCTCTTTCTGGA ATAGAGGTAATTTTGGCTAGTGATCATCTCCGGGTTAAATCAGAAGATGATGTATATGACTTTGTATTAAAGTGGGCTAG ACAGCATTACAAAAGACGGAAGGAAAGGCGAGAAGTTCTGGGTACACGACTTGGGCGTTTAATTCGCTTCCCTTATATGA CATGCCGAAAGCTTGAGAAGGTCTTGATCTGTGATGACTTTACCCACAAGGCTGCATCTAAGCTTGTATTCGAAGCCCTA TTTTTCAAGGCCCAACAATCACTGACAGCATCTGCTTCTTTGAATTCTCGTTTTGTGGAGAGGGCATATAAGTATCGCCC CGTTAAGGTGGTGGAATTTGAAGTTCCCCGACAGCAATGTGTGGTGTATTTGGATCTGAAGCGAGAGGAGTGTGCTGCTT TGTTCCCATCTGGCCGTGTGAAGTCTCAGACATTCCATTTGTGCGGACGGAAGTTTTTGCTATTAGGAGCATGCAGTTTG AATAAACGGGGCACTTCCCGTTGCTTTGAGTTGGCTGTGGGAATGAAGAAAAAGTCATCCGGAAGCTTTGTCGTGGACTG TGAATTTGCTGCAAGGTCTAGGCCAGCAAAGGAGTTTGTTACGAAGTACAAATCCCATTATACATTTACTGGGGGGACGT TTGTTGGTACTGGAAACTTGTTTAAGGTTACATGGTCTAAATTCATGGCTGAGGATAGTCCTTTTTTCATTAACGGTGTT CTCCACCTTAAAGCTGAGTTCACTGTGAGACATTGATCCCTTTATTTCTATTTATGAACATTTTATTCTAGTTTGGTAGC CTTATTTAGCTGCTGGTTTCTCATTTGATGCAGCAAGGCAAGTGTACACTTAATATGATAATTTAACTCTCTGCGTTTCT AGTATGCCAAATACTCCATAATATCATACAAATGGGAGCAATAGTGTGTAGCAGCTTTATATTTAATTTTGTGTGAACCA TAAGCACTTTGACCAACTGCAGTCTTCTTTTAAAATCTGCTCTCCACATAACACGCAGTCTTCTTTAACCTTTATACCTC TATTTTAACATTTTCCTGGCCATGTAATGGATTATATATATTATAGCATTATATATCATTTATCGTAAATGAACACACGA TACACGATACGTTTTTAGAGCTTTCAGTATTTAGAAATCCAACTTTGATTTCAAATCACAAATTAATATGTAAATTACT
CDS sequence (LotjaGi3g1v0519000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTGAGTTGTCCCCTGCTCATGGTGTCTCTTCCTCCGTCAGGGTTCTCCGGATTGAGATCGTGTCTGACCCGCC ACCTAATTCAGACATCAAAAACGCTACAGTTGCCAGAGTTAGAACACTGCGTATCAAATCTCGTATGCTGGCTACTAAAA GCCCTTTCTTCTATAAGCTTTTCTCAAATGGGACGACTGGATCAGAGCTGAAACATGTCACCCTCAGGATTAATGCATCT GAAGAAGCTGTTCTCATGAAGCTATTGAGATTTATGTGCAGCAATCCCTTGAATGCACCACCTGTTTTGTATAAATTTGA AGTCTCTTCATGCCGTAGCCAGTTATTGCCAAATTTGCCCATGGCACCTGACTCTCCATTACTTTACGTGGAGCTTCCTC ATACCATCTTAATGGCTGATGCTGCCAAGCAGTATCTTGCTGGCCAATACAAGGATTTAACCAAGTTCAAAGAAGAGGTT ATGGCCCTTCCTCTTTCTGGAATAGAGGTAATTTTGGCTAGTGATCATCTCCGGGTTAAATCAGAAGATGATGTATATGA CTTTGTATTAAAGTGGGCTAGACAGCATTACAAAAGACGGAAGGAAAGGCGAGAAGTTCTGGGTACACGACTTGGGCGTT TAATTCGCTTCCCTTATATGACATGCCGAAAGCTTGAGAAGGTCTTGATCTGTGATGACTTTACCCACAAGGCTGCATCT AAGCTTGTATTCGAAGCCCTATTTTTCAAGGCCCAACAATCACTGACAGCATCTGCTTCTTTGAATTCTCGTTTTGTGGA GAGGGCATATAAGTATCGCCCCGTTAAGGTGGTGGAATTTGAAGTTCCCCGACAGCAATGTGTGGTGTATTTGGATCTGA AGCGAGAGGAGTGTGCTGCTTTGTTCCCATCTGGCCGTGTGAAGTCTCAGACATTCCATTTGTGCGGACGGAAGTTTTTG CTATTAGGAGCATGCAGTTTGAATAAACGGGGCACTTCCCGTTGCTTTGAGTTGGCTGTGGGAATGAAGAAAAAGTCATC CGGAAGCTTTGTCGTGGACTGTGAATTTGCTGCAAGGTCTAGGCCAGCAAAGGAGTTTGTTACGAAGTACAAATCCCATT ATACATTTACTGGGGGGACGTTTGTTGGTACTGGAAACTTGTTTAAGGTTACATGGTCTAAATTCATGGCTGAGGATAGT CCTTTTTTCATTAACGGTGTTCTCCACCTTAAAGCTGAGTTCACTGTGAGACATTGA
Protein sequence (LotjaGi3g1v0519000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESELSPAHGVSSSVRVLRIEIVSDPPPNSDIKNATVARVRTLRIKSRMLATKSPFFYKLFSNGTTGSELKHVTLRINAS EEAVLMKLLRFMCSNPLNAPPVLYKFEVSSCRSQLLPNLPMAPDSPLLYVELPHTILMADAAKQYLAGQYKDLTKFKEEV MALPLSGIEVILASDHLRVKSEDDVYDFVLKWARQHYKRRKERREVLGTRLGRLIRFPYMTCRKLEKVLICDDFTHKAAS KLVFEALFFKAQQSLTASASLNSRFVERAYKYRPVKVVEFEVPRQQCVVYLDLKREECAALFPSGRVKSQTFHLCGRKFL LLGACSLNKRGTSRCFELAVGMKKKSSGSFVVDCEFAARSRPAKEFVTKYKSHYTFTGGTFVGTGNLFKVTWSKFMAEDS PFFINGVLHLKAEFTVRH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 30 | 101 | 72 | 9.331 | ||
| PANTHER | 32 | 418 | 387 | 1.4E-167 | – | |
| PANTHER | 32 | 418 | 387 | 1.4E-167 | – | |
| CDD | 49 | 92 | 44 | 0.00130439 | – | |
| SMART | 129 | 230 | 102 | 1.0E-4 | ||
| Gene3D | 132 | 243 | 112 | 6.1E-12 | – | |
| CDD | 138 | 221 | 84 | 1.05375E-8 | – | |
| Pfam | 139 | 228 | 90 | 4.4E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0519000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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