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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011705
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 37 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.326s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0065459.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 22760228 22760981 +
2 domain predictions
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Lj0g3v0122919.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 54981116 54982389 -
2 domain predictions
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Lj0g3v0122929.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 54981116 54982108 -
2 domain predictions
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Lj0g3v0135349.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 62164530 62166775 -
3 domain predictions
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Lj0g3v0188999.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Fragaria vesca subsp]. vesca] gi|470141990|ref|XP_004306705.1| chr0 92400234 92400525 +
2 domain predictions
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Lj0g3v0193919.2
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356506034|ref|XP_003521793.1| chr0 94645485 94647803 +
2 domain predictions
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Lj0g3v0337169.1
n.a. Kelch-like protein [Medicago truncatula] gi|358346302|ref|XP_003637208.1| chr0 176568385 176569155 +
2 domain predictions
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Lj0g3v0339349.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr0 177746176 177748523 -
3 domain predictions
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Lj1g3v5031310.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356573187|ref|XP_003554745.1| chr1 61307207 61311791 -
3 domain predictions
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Lj3g3v2364160.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr3 29611767 29614791 +
3 domain predictions
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Lj3g3v3241050.2
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356520334|ref|XP_003528818.1| chr3 39983559 39986633 +
3 domain predictions
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Lj3g3v3241060.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine max] gi|356573187|ref|XP_003554745.1| chr3 39988451 39990314 +
3 domain predictions
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Lj3g3v3527490.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr3 43115959 43117392 -
3 domain predictions
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Lj3g3v3678730.1
n.a. POZ/BTB containin G-protein 1 isoform 5 [Theobroma cacao] gi|508703913|gb|EOX95809.1| chr3 44697244 44697961 +
2 domain predictions
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Lj3g3v3688840.1
n.a. PREDICTED: BTB/POZ domain-containing protein POB1-like [Cicer arietinum] gi|502156968|ref|XP_004510713.1| chr3 44740225 44741652 -
3 domain predictions
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Lj4g3v1199760.2
n.a. PREDICTED: BTB/POZ domain-containing protein FBL11-like [Cicer arietinum] gi|502111742|ref|XP_004494153.1| chr4 17553844 17562403 +
3 domain predictions
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Lj5g3v0279120.2
n.a. Kelch-like protein [Medicago truncatula] gi|357490099|ref|XP_003615337.1| chr5 2299980 2308182 -
3 domain predictions
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LotjaGi1g1v0678600.1
n.a. BTB/POZ domain-containing protein FBL11; TAIR: AT2G36370.1 ubiquitin-protein ligase; Swiss-Prot: sp|Q8S8F2|FBL11_ARATH BTB/POZ domain-containing protein FBL11; TrEMBL-Plants: tr|K7KFZ3|K7KFZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0678600 LjG1.1_chr1 124483303 124495383 +
3 domain predictions
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LotjaGi1g1v0789100.1
n.a. BTB/POZ domain-containing family protein; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|I3SFT8|I3SFT8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0789100 LjG1.1_chr1 136141007 136146088 -
3 domain predictions
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LotjaGi2g1v0373000.1
n.a. BTB/POZ domain-containing protein; TAIR: AT3G61600.2 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|V7ANN5|V7ANN5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0373000 LjG1.1_chr2 86994683 86997716 +
3 domain predictions
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LotjaGi3g1v0006900.1
n.a. BTB/POZ/Kelch-associated protein; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|A0A0D2PTN0|A0A0D2PTN0_GOSRA Uncharacterized protein; Found in the gene: LotjaGi3g1v0006900 LjG1.1_chr3 821689 827885 -
3 domain predictions
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LotjaGi3g1v0007000.1
n.a. BTB/POZ domain-containing family protein; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|A0A0B0N127|A0A0B0N127_GOSAR BTB/POZ domain-containing POB1-like protein; Found in the gene: LotjaGi3g1v0007000 LjG1.1_chr3 821689 827885 +
2 domain predictions
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LotjaGi3g1v0007000.2
n.a. BTB/POZ domain-containing family protein; TAIR: AT3G61600.2 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|A0A067H3D5|A0A067H3D5_CITSI Uncharacterized protein; Found in the gene: LotjaGi3g1v0007000 LjG1.1_chr3 821689 827885 +
2 domain predictions
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LotjaGi3g1v0007000.3
n.a. BTB/POZ domain-containing family protein; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|A0A0B0N127|A0A0B0N127_GOSAR BTB/POZ domain-containing POB1-like protein; Found in the gene: LotjaGi3g1v0007000 LjG1.1_chr3 821755 824327 +
2 domain predictions
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LotjaGi3g1v0061100.1
n.a. BTB/POZ domain-containing family protein; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|A0A067H3D5|A0A067H3D5_CITSI Uncharacterized protein; Found in the gene: LotjaGi3g1v0061100 LjG1.1_chr3 6470253 6472627 -
2 domain predictions
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LotjaGi3g1v0067000.1
n.a. BTB/POZ domain-containing family protein; TAIR: AT2G46260.1 BTB/POZ/Kelch-associated protein; Swiss-Prot: sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260; TrEMBL-Plants: tr|A0A0B2RSL0|A0A0B2RSL0_GLYSO BTB/POZ domain-containing protein POB1; Found in the gene: LotjaGi3g1v0067000 LjG1.1_chr3 7260601 7264198 -
3 domain predictions
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LotjaGi3g1v0148700.1
n.a. BTB/POZ domain-containing family protein; TAIR: AT2G46260.1 BTB/POZ/Kelch-associated protein; Swiss-Prot: sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260; TrEMBL-Plants: tr|A0A1J7HQD6|A0A1J7HQD6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0148700 LjG1.1_chr3 20000686 20013291 +
2 domain predictions
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LotjaGi3g1v0148700.2
n.a. BTB/POZ domain-containing family protein; TAIR: AT2G46260.1 BTB/POZ/Kelch-associated protein; Swiss-Prot: sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260; TrEMBL-Plants: tr|A0A1J7HQD6|A0A1J7HQD6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0148700 LjG1.1_chr3 20000692 20006773 +
3 domain predictions
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LotjaGi3g1v0148700.3
n.a. BTB/POZ domain-containing family protein; TAIR: AT2G46260.1 BTB/POZ/Kelch-associated protein; Swiss-Prot: sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260; TrEMBL-Plants: tr|A0A1J7HQD6|A0A1J7HQD6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0148700 LjG1.1_chr3 20000692 20012974 +
2 domain predictions
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LotjaGi3g1v0390200.1
n.a. BTB/POZ domain-containing family protein; TAIR: AT2G46260.1 BTB/POZ/Kelch-associated protein; Swiss-Prot: sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260; TrEMBL-Plants: tr|A0A1J7HQD6|A0A1J7HQD6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0390200 LjG1.1_chr3 78840298 78843773 +
3 domain predictions
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LotjaGi3g1v0493800_LC.1
n.a. BTB/POZ domain-containing family protein; TAIR: AT3G61600.2 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|V7ANN5|V7ANN5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0493800_LC LjG1.1_chr3 91214860 91218175 +
3 domain predictions
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LotjaGi3g1v0493800_LC.3
n.a. BTB/POZ domain-containing family protein; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|V7ANN5|V7ANN5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0493800_LC LjG1.1_chr3 91214860 91218175 +
3 domain predictions
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LotjaGi3g1v0493900.1
n.a. BTB/POZ domain-containing family protein; TAIR: AT2G46260.1 BTB/POZ/Kelch-associated protein; Swiss-Prot: sp|O82343|Y2626_ARATH BTB/POZ domain-containing protein At2g46260; TrEMBL-Plants: tr|A0A0B0N127|A0A0B0N127_GOSAR BTB/POZ domain-containing POB1-like protein; Found in the gene: LotjaGi3g1v0493900 LjG1.1_chr3 91220062 91221887 +
3 domain predictions
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LotjaGi3g1v0519000.1
n.a. BTB/POZ domain-containing protein POB1; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|I3S030|I3S030_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0519000 LjG1.1_chr3 93549445 93552163 +
3 domain predictions
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LotjaGi5g1v0000900.1
n.a. BTB/POZ domain-containing protein; TAIR: AT2G30600.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q8LEV3|Y2060_ARATH BTB/POZ domain-containing protein At2g30600; TrEMBL-Plants: tr|G7JYH5|G7JYH5_MEDTR BTB/POZ domain plant protein; Found in the gene: LotjaGi5g1v0000900 LjG1.1_chr5 151942 162143 +
3 domain predictions
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LotjaGi5g1v0000900.3
n.a. BTB/POZ domain-containing protein; TAIR: AT2G30600.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q8LEV3|Y2060_ARATH BTB/POZ domain-containing protein At2g30600; TrEMBL-Plants: tr|A0A0R0GGE3|A0A0R0GGE3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0000900 LjG1.1_chr5 152456 160166 +
3 domain predictions
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LotjaGi5g1v0000900.4
n.a. BTB/POZ domain-containing protein; TAIR: AT2G30600.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q8LEV3|Y2060_ARATH BTB/POZ domain-containing protein At2g30600; TrEMBL-Plants: tr|A0A0R0GGE3|A0A0R0GGE3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0000900 LjG1.1_chr5 152456 160166 +
3 domain predictions
 –