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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0519900 |
| Transcript ID | LotjaGi3g1v0519900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; TAIR: AT1G68000.1 phosphatidylinositol synthase 1; Swiss-Prot: sp|Q8LBA6|PIS1_ARATH CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1; TrEMBL-Plants: tr|A0A1J7HCS8|A0A1J7HCS8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0519900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:93629172..93633509) extracted from Lotus japonicus Gifu genome v1.2.
TGTAATCTTGGAAGTCAAGGTGTCAATCTCCTTTAATGGATAACTATCATAAGAATTAGGATGTGTGATTTACACAATTG AAAATTAAAGTAATATAGATTATTAAAAAAAAGGAATAAAGCAGAAAAGAAAAAGAAGAGGCAGCATCCAAATAAACTAA GCCAGTGCCACCTTGAGTTGTGCCCTGCTCGAATCTAACCGTCGTCGCTACTGCCAGACGCACCTCCTCCCGTTGCCGGA ATCCACCGCCACTCTCTCCGCCGCCGGTATCGTACGATTCTCTCTCTTGCTCCCACCCTCTATTCCTATCTATCCCCTTC CCTGCAATAGATTCAAATTCGTTGCGTGCTTCGCTTATAGAAAACCAAGGGTAATCGGAATTTCCAGCATATTAGCAGTT ACGGTTGCAATGAATTTTCGATGTGACTTCTAGATTGGAATAAAGGGTAACATGTTTCTGATTTTGCATCGATTTGTGAT TTGACATTTGCGAAATGAAGAAGAAGAAGAAAACGATGTAACAGATTGAGCTGATAGCTAGGTTGCCACAAACCTAGATT TGATATGTTAACCTGTTGTGTATGAAACATTGAGATTTGAAAAATTGATGGAACACTACCCATTTTGGTTGTTTCTATTG GAGATGATTGATAAACTAAGAAAGTTCATTATCAGATGTTGACTTTCCTTGCTACCTGATGGTTGTTTTTTTTTTTCCTT GTCAAATTTATGTATGTGGGTGAATGAATGGTTAGGTAGATGATTCATGATTGTCAACTTCATGCATATTCTGTTGTGGT TATATGTGTATGAGATTGGAGTACCTATGTGTGCATCAGTGCATGTGTCTTTGTGGATTTGGGGTTTCTTACTGGAAGTG TGTGTGTGCAGGTGAATATTTGTTGGTTGGAAATCCTATACTTGTTAAACAAGTTTAGAGTATAAAGAAGATTCAATGGC CAAGAAACCTGGACCGAGACCCAGTAAAATATCTGTGTACCTTTACATTCCGAATATCATTGGTGGGTAATTATTTAGAA TAATGATGGATATTTCGTTGTATTCTCTGATGTTTACTTGCATATTGTAGAAACTGTACCGGTCTAATAGTTATTGTCGA TAAGAATAATGAGATACAACTTCAATATCGGGCAGATGAACAGCAATACAGAAAATTTATGCAGGCCATTTTCCTTGCTG CTACGTATGTTTTTTTGGAAATATTAGTTTTGGGACTGTTTATTGGATAATACCATGTGTTAGCAGCTGATGTTTTGGAC AAAAGGAAGTTTATCATTGTACTAGTGTAACACTGTTTATTATTAGAGTGTTCAATAGACATTACTCAAGTTCTTGCTCA TAGTTCTCCACAAATACACTGTCATAACTCTTGTTTGTCTCTGTGATGATACAGGATACATCCGGGTTATTTTAAACTGT GTTGCCTTCTATCTTTGTTTTACAAACAAAATCCTTTTCTCTATTCTCTATTTTTTCAGGTGGGATGCAATTTTATGAAT TTTATTTTTCTGGTTTTGAGCTTTTTCCCCTTTAATGTTTATGGGCTGGGGAGCATAATTTGGCTTAATTTGTGTTGCCA GCTTTGTATGTGATGCTGTGGATGGCTGGTGTGCTCGTAAATTCAATCAAGGTATATATACTTTCTTGTAGCTGTTAGAT CACCCTTTATGTGACAATATTTCATATAGAAATAATGTCATTACTTGACTAAGAAAAACGTTGAGCACTATTTATCTGTG TCCATAGCAGCTACTGATGCCGTTGCATTTTCGTATATCACTTTAAACTTCTTTACCCTTAGCTGCCTTCTGTTTTGTGA AAACAGTAAAATTTGATTTTTCTAACTCTTTTCCTGATTTATGGATGCTTCAAAATCATTTGGAACATTGACGATTGAAA ATAAGGTTGAAACATGAAATACCATGGGTAGAATTTGCTTAAATATTTCGCTATGAAACTTTTACAGTTTAAATTTGTGG CCATGTATACTTTTTCTAGTCTAAGTGCCAACTGCCAAGATTAAGGATGATTTGTTCTGCTCCCATGACTGCATTTTTCT CAATCTTTGTTACATTAAAAAAAAAAAACTGGGTAGGCCATATGCAAGTATTACCTAAAATATTAGAGGGGTAGTATGGG TAGAGAAGGTTAGCTTAATTGGTATGATCAAACATCATCTACGAAACGGTGTTGGGTTCAAATTTTGTTAGTAGTGTTTC ATTTGCATGCCATGTGTAAGTACCAGTATAAGCCAAGCTTGTAGGCTGTAGTATGCCCTCACTGTGCAATTAGGAAAACT CTCATCTCCCTACTCTTTTTTTCCCCCTTTTCTTTTAACATTTTCAAAGCAATTGTTGCTTATAATTAAACAATGTATTA ATCTGGAATTTTCTTTTTTTCATTTTGTATCATTACTTTCTTGATTCAGTGTCGACCTTTGGAGCCGTGCTTGACATGAT AACAGACAGGTCATTCTTTGTTCTCTCTTGCTCTCTGTATGCATGCAAGCCAAAGAAATGTGTTGATTATTGCTGTTTTA ACTTCTCTATATTGTTCAATTCTTGTGTTGCTTTGAATTAATGTAGCTTTCTAATACCAGGATTAGCACTGCTTGTCTAC TTGTAGTTCTTTCACAAGTGTACAAGTAAGACATTTCTCCTTTTAAGCGGTTCATCAGTTGTTATAATTTTAAGCATGTG TACCTGACTTTTGGGCTGAATTTGTGTAAAGGCCTGGCTTGATCTTCTTGTCATTGCTCGCCTTAGATATTGCCAGCCAC TGGCTGCAAATGTACAGGTATTCTATCAAATTTGTGCCCCCTAATTCTAATTTGATGATTCTCCTATTACGGGTTTGGTC TTGATAAATTTATTGGGCTGGATTTTTTACTTTAAATGCAGCACTTTCTTGGCGGGCAAGGCTAGTCATAAAGATGTAAA AGACAGCAGCAATTGGCTTTTCAGGGCATATTATGGAAATAGGATGTTTATGGCTTACTGCTGCGTCTCATGTGAGGTAA CTTTAATACCATCGTCTAGATCTTTTGTGAAACACCTTTTATTGAAGATTTTTTAGGTTCTTATTCGTAACATTTTACAG GTTCTTTACTTAACTCTGTTTTATCTTTCGGAGACTCAAACAGGGAAATTGGTGGATGTAAGTTTTCGCTCTTTGTTTCT ACTGCTGTTACTTATCTGTAAGGTTTCTAGAGAGTTTCCTCCTGCTATCACCCCAGTTTCTCACGCTTTCATTTTCAGGT TGTATCGAGTAATCTCCAAAAGATATCATTGATTTCTTTCCTAATTGGTACTACTTTATTTGGATGGGCAACCAAGCAAG TTATAAATGTTATTCAGGTTGGTTCATGATACATTTATGCTGGATATTTAGATGATGATTGACGAGGTTCTGTATAATGT ATCTATTTAGTTTTTTACCAACCCCATACCTCATAATGAAAAGAGGAAGAAAAAAAGCAGCAAAACATATGAGAGAACAA AAGAAAATCCAAACTCCAAAGAAAACTGAGCGGAACTTAATTGTTCATATTTTTCAGTTTGGAATATTTATCTTGTGATA GTCATGGAAAATTTGTAGCCTTTGAGTTCCTGTAAGCCAAACATTCTTTTAGCATGACTCGGGAACTTCATATTGTGACC TGCTAATTGACTTCAAAGATTTTGTTTTTTACATTCTACTAGCTATGTAAAGGCTTTCTTGGAATAAGAATTGAATGAGT GATTTTACCATGTGTTCATTGGATGTTTTTTTACTTATCTAGTTGTTCATTGAATTAAGTCCTGCATTCTAATTTGCTTT ACGGCCCTTGTGATTTCAGATGAAGACAGCAGCAGACGTGTGTGTGCTTTATGACATGGACAAAAAACGCAGCAACTGAT GATTCTTCCTTAACCACAAGTCCATTGCCTTTTAATACAAGTTTTGAGCTCAAAGATTAACGATACCCAAGGTGGCAATT GAGCTTGAGCTGTTCAGTTTCTGTCATTTGTAATGAAAGAAATAGAATGAATTAAAGAATCTAGCTTTACAAGTAGCACA AATTTCTGTAGGATGTGGTGGTTCGTTGCCTTTTATTGTTGACCAATGATTTGTTCAGTTCTGAATTCCTAATCAAGTCC ATATTATCTGCTAATAGTGTTCCACGGGTTTTAAATTGTAATCATTTTTTGTGAACATCTTGCATATTCAAATCCAGTGT ATTTCTCTCAGTTTATTTTCTCTTGGTTAAAATAGTATTTGTGCTTGTACTTATTTACTATCACAATAATATGAAAAATC ACGGTTGATCATTTTTTT
CDS sequence (LotjaGi3g1v0519900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAGAAACCTGGACCGAGACCCAGTAAAATATCTGTGTACCTTTACATTCCGAATATCATTGGATACATCCGGGT TATTTTAAACTGTGTTGCCTTCTATCTTTGTTTTACAAACAAAATCCTTTTCTCTATTCTCTATTTTTTCAGCTTTGTAT GTGATGCTGTGGATGGCTGGTGTGCTCGTAAATTCAATCAAGTGTCGACCTTTGGAGCCGTGCTTGACATGATAACAGAC AGGATTAGCACTGCTTGTCTACTTGTAGTTCTTTCACAAGTGTACAAGCCTGGCTTGATCTTCTTGTCATTGCTCGCCTT AGATATTGCCAGCCACTGGCTGCAAATGTACAGCACTTTCTTGGCGGGCAAGGCTAGTCATAAAGATGTAAAAGACAGCA GCAATTGGCTTTTCAGGGCATATTATGGAAATAGGATGTTTATGGCTTACTGCTGCGTCTCATGTGAGGTTCTTTACTTA ACTCTGTTTTATCTTTCGGAGACTCAAACAGGGAAATTGGTGGATGTTGTATCGAGTAATCTCCAAAAGATATCATTGAT TTCTTTCCTAATTGGTACTACTTTATTTGGATGGGCAACCAAGCAAGTTATAAATGTTATTCAGATGAAGACAGCAGCAG ACGTGTGTGTGCTTTATGACATGGACAAAAAACGCAGCAACTGA
Protein sequence (LotjaGi3g1v0519900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKKPGPRPSKISVYLYIPNIIGYIRVILNCVAFYLCFTNKILFSILYFFSFVCDAVDGWCARKFNQVSTFGAVLDMITD RISTACLLVVLSQVYKPGLIFLSLLALDIASHWLQMYSTFLAGKASHKDVKDSSNWLFRAYYGNRMFMAYCCVSCEVLYL TLFYLSETQTGKLVDVVSSNLQKISLISFLIGTTLFGWATKQVINVIQMKTAADVCVLYDMDKKRSN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 227 | 227 | 1.8E-87 | ||
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 4 | 225 | 222 | 1.2E-119 | – | |
| PANTHER | 4 | 225 | 222 | 1.2E-119 | – | |
| Gene3D | 10 | 177 | 168 | 9.7E-16 | ||
| Phobius | 12 | 36 | 25 | - | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| Pfam | 18 | 80 | 63 | 5.7E-15 | ||
| Phobius | 37 | 41 | 5 | - | – | |
| Phobius | 42 | 61 | 20 | - | – | |
| ProSitePatterns | 58 | 80 | 23 | - | ||
| Phobius | 62 | 72 | 11 | - | – | |
| Phobius | 73 | 94 | 22 | - | – | |
| Phobius | 95 | 99 | 5 | - | – | |
| Phobius | 100 | 121 | 22 | - | – | |
| Phobius | 122 | 141 | 20 | - | – | |
| Phobius | 142 | 164 | 23 | - | – | |
| TMHMM | 146 | 165 | 20 | - | – | |
| Phobius | 165 | 183 | 19 | - | – | |
| Phobius | 184 | 200 | 17 | - | – | |
| TMHMM | 185 | 207 | 23 | - | – | |
| Phobius | 201 | 227 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phospholipid biosynthetic process | The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Phosphotransferase activity, for other substituted phosphate groups | Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor). |
Expression pattern of LotjaGi3g1v0519900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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