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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0524600 |
| Transcript ID | LotjaGi3g1v0524600.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone H2A deubiquitinase (DUF3755); TAIR: AT1G60670.5 hypothetical protein (DUF3755); Swiss-Prot: sp|E4ZHV7|AMPP3_LEPMJ Probable Xaa-Pro aminopeptidase PEPP; TrEMBL-Plants: tr|A0A0S3SDZ8|A0A0S3SDZ8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0524600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:94151074..94157923) extracted from Lotus japonicus Gifu genome v1.2.
GGAGTCCACAATGATTAGCATCAAATGCTTATTGGGATTCCCACTTTTTGCTGAATTCCAAGATCCACAACCATCCATTA TTATCTCTCTATTTTCCTTTATGCTGCTTCCTCATTGGTGGAAGTAGAAGCCATCTCTTGTCTCTCTCTCTGGTGAATGT GTGTGTGTGTGTCACCAAAGCAAAGCAGTGTACCCCGCAACCCAGAAAGTAGTAGCAAGTGCCAAATGGTAGTGCAGTAA ATAGCATTCTAGTGTATTGAAAGTGTAGTTAGTGAGAACCAAAAAGCACCACCACCATCAACACCGTCCAACACCAACGT TTCTGTTTCTGCTGAAAAGGTATCTCTATCTCTCTCTCTCTTTCTCTCTTTCTCTCACTATCCACTCCCTGTTGTTCTGT TACGACACGTCTGATTTGCGGTTATTGTGGCTTTTTATCGTTTTCCATTGCTTTTCAGGACCATTATTGTCTCCTTTCAA CATGAACCTTTCTCCTTTCTTCTAGACACTCAATTGGGGTTTCAGGGTTTCAGGTTTCTTCGCCTTTGTGGTTTTCTCTG TATTTCTTTTCTGGGTTTTCCACTTTTCAGCTAAACTCTTGATTTTTCAGGGTTTTTCATCCTAGGGTTTCTGCTTTTTC ATATGGGGTATCACTAAATTCCCTTAATCAGCTATAGTCTTGATTTTTGAGGGTTTTTCATTGTGGGTTTCTGATTTTTC ATCTGGGGTATCACCAAATTCCCTTAATCAGCTATGGTTCCTTGATAGAGGGTATTTCGGTTCTTGGATTGATACCCTGA ACCTGTGAATTGGTGTGGATTTTTGGTTATTGGTAACTTTCTTTGTGTGAAGATGGTTGTTGGTATAGCTTGTGGGTTAT AGTGATTTGGGGGAATCTTTAGATACAACTAGGAACAAAGGGATAAGGATGGCAGCAGAGTCAAACGCAGGGTTTCATCA TCAGGATATAGATTCTACTTGGAACCGTCATGCAATATCATTTCAGCCTGGTGCTATTAATAGCTTGTCCGAGATGGTTC CGATGGGTAACTATTTTGGGTTAAGTAGTAGTTCTTCTGGGATGATGATGTATCCTGGGAATTCAAACATGGTTAACAGC AATCCTGTGATGAGTCAAGTTGGTAATTCGCCTGGTTCTTCTCTTATGCTTGATTCAGCCCCGGGGCTGAAGCATGACAC TGGTTTGGCTGTTGAGTGGTCTGTTGATGAACAATACAAATTGAAGGAGGGTCTTGCCAAGTAAGTAGTTTGTTGTTACT AGTAATTTTTAGGTTTTTTTTTCCCAACTTGATTTTGCCATCTCTGTGTCACATTGGTTCTTTGTTACTTGTTTCCAATT CACTTTCTCATGAAAAGATGTTTCTGATCTTAGATTTCAGAATTTTAAAATTTTTTGTAAGGTTGAAGCAATTGTCAATT GGCTCTTTATATATGTGGTGGATTAATCATGCTGTTTGTATCTGCAAGATTAATCTGGAAGCATGAGACTAAACATGCTT TCGGCCTTTGTATCTGTGGCCTGTATGCATTATTATTCGTATGATGACCTTTCGCATTTCCCAATATGATTTTGGTTTGA CATTTCAATTCCAATTTAAAATGCTCCTAAGTTCTATTTTCTTTGCTTAACTGCTAATATTTAGTTGCTGTCATGCTTTT CTCTTCGAGAATCACTTTGGTTGTAGTGACTATGCTTGTTAATTGTTGAATGGTATATATGTTTATGCTATTTCTTTAAC TTCCTATGGCTTATATTTCATGACCCTTGTTTTCATGAATCTTTGGTTTCATGACTAGCTATGCTGATGAGCCAAGTATC ATGAGGTACATAAAAATTGCTGCCTCATTGCCTGATAAAACTGTTCGTGATGTTGCTTTGAGGTGTAGGTGGTTGACAGT AAGCTCTTTCTATTTCAACAATGTCTAATCTCCATATTTCAATGCTGCCTATTAACGACTACAGAAGACAATTTTAAATT CTAAATGCTCTGAAGTCAGTTGAATAATATGTTGCAATTAACCAATTTCCAATTTATTCAAAATTAACTCATCTTCTGTC CTATGTCTCACTTCCTCCTATATCTTAGTTTTGGCATTGTTGCAATGGCTTAAGCGTTACATGGCTATGTAGCTAAACTG TTGTATAAGTGACCTTGATCTCAGTGGTTTAAAGGCAAGATTTTAGGTTTTGCTTGCTGTCGTGGTAGCAGTTCCAGAAT TTGCAAAAAAAAATGCAGGAAAATAAGGCTGATGGAACTTTTAATTAGACCAAAATATGGTTGTGGTGGCTGCCACAACA CTATTGTGGCTACAATTGCCACTGCATATAACAATTTTGAATTTTAGTTAAAGGTCGTGTCGTGTTTCATCTCATTATTC CTTGCCCCTTTTTCCGTTTGAAAGTGGAAAAATTGTTTGGGTCCATTATAACATTTTATCACACAAAAAATAAAATAAAA GAAAGTTGCACACTGCATGAACATAATGCATTAAGCAATGAACTTGTATACTCATGTAGGTTGCACCTTTACATCTGTTT ATGGAAGCTTAAAATACTGTTTTAACCATTTTGTAGAGGAAGCGAAGGAAACAAGAAGAATACAGTATGGGAAAGAAGGT CTATAACAGAAAGGTACAAGTTTGGGAAGCTATACTATTTTTCTTTTTGTGTTCGTTGAGGAGTTGTCAAGTTAATATGA AGTTTTTTTCTCACCTATTCTCTACTTGACATTTTAAATAGATTTTGAATTTCAAATATCTGTTTGAAGATTAAAGAAAA ATTCATTTTAAACTGAAGGAGAGATCGAAAAAATAAATATTCTGTTACATTATTGGTTGTCGGTTGAAGTAACTTTCATT ATAACTTATAAGTCGTTTCAAAATATTAAGTCCTGTATAAATTTTGAAGTCCTGTATACGTGGTCCCCCAGATTCTATTT TTATTCCTTGGTAACCCATGCACTGGGGATACTCACTAGAAAACTCCTTATTATTGTTATTGCTGTTGTTCCTGTAGTCC AAACTGGTACCGTTGAATAAAATGAGTTTCTTTGAATCCTCTCAACCTGCCTAACTGTCCTGTCAAGGATGTTGATGATA ACTCAAATGTTATGTTAATTACAAAACATGCTTATGTTGCATCCCATTAATGGGATTCCATTTTTGATATATTGAATCAA TTAATGTCTTTAGGATCTAATGTTGATTGATGAACCAGTATTCTAAAGTCATGCTTCTTCAGGATAAGCCGTTGGAGTCA GCATCAAAGACAAATTTGCATTCAGCTGTGCCCCCGAGCATGGGTCCGTATTCTCACATGTCTCACCATTTTGACCGTGG TCACCAGATACCATACGATGGTTAGTATATCAATTGTTTTTCGACTTAAATTATAATGTCGATTCTCATCATGTGTGCAA CTGAATTATTTCTTATTTTTAAGTTTTCTGCTCAGTTAACCTGAAATTAGGGCTCTTGATTGGTATTCTAAACTGAAATT TAGAGCTCAGTTGCACATCTCTTTGGTAGGCTATGGTGCAGTTCTATGTTGTTTAATGTTCTGTTATATTTAGTTGAAGT TCTGGTAGCTTTTAGTTTGTGTCAGGTAAATAGAATGGCAGGGCGTGTTTTTGTTATCACTGCTCTTTTACTTTATGGGT GCCCACTAGGGTGGGCTACTTATATTTTGGTCCACCGGTGGACCAAAGGGTAATTTTGACTATTCCCCCTTCCCTTTACC TTTCCCTTCTCCCCTTTCTCCTTCACTGTACTGTGCCTCTCTCTCCTTCTTCATTCATTCTGGTTTGTGCATCAAACCCT TTCAAACTTTTTCATCACCAATTCACCATCATCTTCTTCTTCTTCGGGGTTAAGAGTGTTGTGTTCTTTGAAGCTTTCTT CGAGAACAATGGCTTGATCTTTGGAGAGTCTGAGTTTTTTCCTTGAAGTTTCACCACCGTCATCATCTTCATCGCTGATT CCTCTGGAGCAATCTCTCTCCTCCACGTCACGCTCTTCGCCATTGCCTTCCCTCTCACTCTGCTTGCCGTTCACGCTGGA GACGGTGCTGTTCGGAGATGAAACCCCTGCTTCATCTTCGCAATCGAAGCCAGACGGTAACCGATTCACATCGATTCCGA TTCCGCCGAGGGAAAAACCGCCTTCGCCACCCCTGCATGTTTCCGAATCTCGATCTGCATGCAAAAACAGGGGTTTAATT AGAATGAATCGTTGAGAGATCTGTTCAATTTTGGGAACTTTTTGAAAGAGGGGAAAAATTTAGTGCACTTTTTATGAATG CGAATAAACAGGAAAATCGACATTTTCTACCACCGCTAGTGAGGACCCTGATCCCTTTTTCGATTTGGATTGGGATTGGG TTTGGGTTGGATTAGGGTTAGGGTTTGAGGTGGTGGATGATGATGAAGAGTAGCGGTGGTAGAAAATGTCATCTTTTTCA TCGCTATCGCTCTGTTTCCCCCCTTTCTTCTAGCTTCAGAGTTGGACTCCGACCTCACCGTCACAGATCCTGTTCTTTAC CTTTGTTAAATCAAGACCAATTGTTAAATCTGAACATGAACATGGACATTTTTCACTTCAATCTAATCAAAACCCAATTT AATTTTCACCGTATCCATAACATTAGAAACACTGATTCCGGCATCATGGCAAAAATTCAGGAATGGATCTCCATCAGAAA TGTGAAGGGAGAAGAAGAGGGGTCTATTTACACTATTGCCCTTTTATCATCCATCAAATCCTAACCACTCAAATAAGGAA TATTCTAAGATTCTTAAATCCAACGGTATTTAGGACTGGTCCACCGGTGGACCAAAATATAATTAGCCCACCCTAGTGGG CACCCTTCTTTTTAATATATTTACCTAATCCTTTTGGATTATAATAAGGTGTTAGACCCTTCAAGATTTTATTGCTTCTC TCTTTTGTCACTTGAACCAGTGTCTATATTTCACTAAATACTTAATTCCTTGTGTATGATTAGGAATTTGCGGTCCCATG AAGCAACTCATGGAGCAGAATGCTCAAGCTTTTAGACAAATCAGTACCAATTTATCTACTTACAAGGTAAATAAGCTCAG CTATCATATGTTTTAGTGCTGTACCTATAAATACTGGCACCGCTTATGATTTTAGGCCCTTCACAAATTCAGAACATCTT CACCATTTTTAACAACTGATTTAGTTGCTGTAATACTAACCATATGTGGCATTTCATCTGCATAGATTTTTTTCGTGGAT GATTAATTAATTTCATGTTTAGGAAAATATATAATTGTTAGACTTAGGAGTTAGGAGAAAGGTATCCCATTCACTTATTC ACATTTGCTCATATCGCTAGACTCAAGGTTTGATATTCCATCTAAGATAGTGATCAATTTTGCTTTGTCTGATTGCTCTA GTTAAACATCTTAACGAATGGATTACTATGATGCTTTGATGAATTTCAAAATTGACCTCTTTTATTATTGTGCGAAGTAT TGCATTAGTTTCCCAATGCCAGTTTTGTTAACTAGGTTCTCCATTCACTTCATTTCACTTTGAATTTTATGATTTGAAAA AGGGTTGTAATCCTGACATAGAACTCTGTCTTCTAAGTTCAAACCATCTGAGCTGGACTTTTTCTCAATGTTAATGCTTA ACATTTATTGAAATCTGAGTCGAGCATCAGTTTGTAGGCAAATGGCTTTATGCTTTCTCTTTTATTCTCTAAGTTCTTTC AACATTCATATATAATTATATACAGAGTGATCACTTCCTTTCGTTAACAGTTCCAGGATAACATTGACCTCTTCTGCCGC ACAAAGCACAACCTCAATACCATTCTAAATGAGTATGTGAATTTTTTGAATTTTATTGTTAACATCAGGCAAATTCATTT TAATTTACACATATATATTTGATGTATATGAACAATATAAGCTCACTAATTAAGTTTTGTGCAGCATGAGAAGGGTGCCT GGGATTATGAGTCAAATGCCGCCACTTCCTGTTACCATTGACGAGGATCTTGCAAGTAGTATTTTGCCTAATAGAACTTA GGTAAGAATCTCTTGGTCATTTTAACACAAATGTTTGATCATATTTGTATATTATAGAATATCAAAATGTATTACTAATT CAAGTGAGGCATAGTGCTGACTCCATCAACATTGCTTCAAAAATCAAATGCATCAGTGGAGAGGTTTGCATTTATATGGG GAATTCATTGCTGCAACTGTTTTGGTGCCACATGCAATTGAAGAGCCAGGGAGTAACTGACAAGTACACATATGAGGAGT TTCCGGAGTTTCTAATCCAGCTTTGATCTTACTACTCCCTGGTTTATTCGTTGTATTTGATTGAAGGAAAAATTTGAACT CCTGTTGTATAACTAAGACCATCTTCCTTACAAAAAAAAAATTGAAAATATGAGAGCAATTAATATAACAATGGTTTGAG TTGAATTCACCATTATTGATTTCAGGGTGTTGGTGTTTCTACCATGCCAGAGAAACTTTGTAGATCTATGTTGCTAGCTT GCCATGGACAAAATTTAAGTAATGATTGTGTGTTTAACTCCTGATAGCTGTTATGTAATTTGTAAAGGGAAATCATTATG TACATATTATGTTGATTGTTTATGAGAGAATCAAGTTATGTCAGGTTGTAGTAAGACAAGCCACCATGCAGCAAACAGCT TCTACTTTTTTTAATCATAGTGTGTTTGGATACTGATTCAATGCAACGTGAACCTTCATTGTAATTCATTAGAAGAGTTG TGTTCATAGTGTGTTTGGATACTGATTCAATGCATGCTGATATTTGTTTG
CDS sequence (LotjaGi3g1v0524600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCAGAGTCAAACGCAGGGTTTCATCATCAGGATATAGATTCTACTTGGAACCGTCATGCAATATCATTTCAGCC TGGTGCTATTAATAGCTTGTCCGAGATGGTTCCGATGGGTAACTATTTTGGGTTAAGTAGTAGTTCTTCTGGGATGATGA TGTATCCTGGGAATTCAAACATGGTTAACAGCAATCCTGTGATGAGTCAAGTTGGTAATTCGCCTGGTTCTTCTCTTATG CTTGATTCAGCCCCGGGGCTGAAGCATGACACTGGTTTGGCTGTTGAGTGGTCTGTTGATGAACAATACAAATTGAAGGA GGGTCTTGCCAACTATGCTGATGAGCCAAGTATCATGAGGTACATAAAAATTGCTGCCTCATTGCCTGATAAAACTGTTC GTGATGTTGCTTTGAGGTGTAGGTGGTTGACAAGGAAGCGAAGGAAACAAGAAGAATACAGTATGGGAAAGAAGGTCTAT AACAGAAAGGATAAGCCGTTGGAGTCAGCATCAAAGACAAATTTGCATTCAGCTGTGCCCCCGAGCATGGGTCCGTATTC TCACATGTCTCACCATTTTGACCGTGGTCACCAGATACCATACGATGGAATTTGCGGTCCCATGAAGCAACTCATGGAGC AGAATGCTCAAGCTTTTAGACAAATCAGTACCAATTTATCTACTTACAAGTTCCAGGATAACATTGACCTCTTCTGCCGC ACAAAGCACAACCTCAATACCATTCTAAATGACATGAGAAGGGTGCCTGGGATTATGAGTCAAATGCCGCCACTTCCTGT TACCATTGACGAGGATCTTGCAAGTAGTATTTTGCCTAATAGAACTTAG
Protein sequence (LotjaGi3g1v0524600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAESNAGFHHQDIDSTWNRHAISFQPGAINSLSEMVPMGNYFGLSSSSSGMMMYPGNSNMVNSNPVMSQVGNSPGSSLM LDSAPGLKHDTGLAVEWSVDEQYKLKEGLANYADEPSIMRYIKIAASLPDKTVRDVALRCRWLTRKRRKQEEYSMGKKVY NRKDKPLESASKTNLHSAVPPSMGPYSHMSHHFDRGHQIPYDGICGPMKQLMEQNAQAFRQISTNLSTYKFQDNIDLFCR TKHNLNTILNDMRRVPGIMSQMPPLPVTIDEDLASSILPNRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 282 | 282 | 1.9E-155 | – | |
| PANTHER | 1 | 282 | 282 | 1.9E-155 | – | |
| SUPERFAMILY | 85 | 153 | 69 | 7.36E-5 | ||
| Gene3D | 93 | 154 | 62 | 4.4E-5 | – | |
| MobiDBLite | 153 | 191 | 39 | - | – | |
| MobiDBLite | 153 | 170 | 18 | - | – | |
| Pfam | 228 | 261 | 34 | 9.4E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi3g1v0524600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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