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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0527300 |
| Transcript ID | LotjaGi3g1v0527300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G38850.1 Disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q9C7X0|ADR2_ARATH Disease resistance protein ADR2; TrEMBL-Plants: tr|G7JKN6|G7JKN6_MEDTR Disease resistance protein (TIR-NBS-LRR class), putative; Found in the gene: LotjaGi3g1v0527300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:94379776..94383465) extracted from Lotus japonicus Gifu genome v1.2.
GGGAGAGGTCGTGTGAAGTGCTATGATCTTTTTCTTCAAGGGTTTAAAGTTTGGCCTCTAAAATATTTGTTGTGGAGGGA TTGCCCTCTAAAATCACTGCCAGAGTGTTTTTCTGCTAAAAGTATTGTTAGATTGGAGTTGCCAGGAGGTCAGATGCAAA AACTTTGGGATGGAGTGAAGGTAAATACGTGTCTTTTTCCTATTAATATTTTGGATCCTGATTTGAATGTTTTCATAATA TAAGTTTTTAGCTATGGGTTTAGAATTTAGATGTATGAATGCATGTTGTGCCAGTGCCACTTATCTTGTAGAAGATTTGA TTTTTCATGCACATTGAAATTGATTTATTCTTTAGATGATATAGTAGAAATGAAATATGATTATGATTTTCCTGATAGGT GCATACTTTATCTTTCTAAGATACTTGTCTTTTCCTCTCAGTTTTGTTGTTGATGCGGCAATTTATTCTAGGGGTTACAT ATTAATTTTTAGAAGGTCTCCGACTCCAAGTAATATAGTTTAAGATGTACTTTGCATAATATTGCTTGGAAGGGTTGTTC ATTTTGCTTATATTTGGTTTCTTCATTTTGTTTCAGAATTTGGTTAATTTAAAAGAAGTTCTACTCGCTAGAGGCTATTT CCTGGAGGAGCTTCCAGACTTTTCAAAAGCCATAAATCTCGAGGTTCTGGATGTCTGTGATTGTGTGAGATTGAAGAGTG TCCATCCATCTATTTACTCTCTCAACAAGCTTCAGATATTCAAACTAAAAGGGTGCGAGTCCCTTACCGAATTTACAAGT GATACTCGTTTAAGCTCCTTGTGGTATCTCGACCTTACAAGTTGCACAAGTCTAAGGAAGTTGTCAGTGACCTCAGAGAA TATCACAGACCTACGTTTGGGGGGAATTCCTGCCAATGTATTGCCGTCATCATTTGCTTGTCAAAGCAAGCTAGAAATCT TGGATTTACGCAAAACTAAATATGAGACTTTACCTTCAAGCATCAAGAATCTTACAAGATTGCAATGTCTACTCATATCT GGCTGTTTTGAACTTCTGTCAATACCGGTGCTTCCCCTGTCCCTTGAAACTCTATCAACTGATGGATGCAAATCACTAAA GACAATATTCTTCCCTTTAACAGATGCTGAACAATTCAACGAAAAAAGGAAAAAAGTTTCATTCTGGAATTGCTGGAACT TGGATGAACGTTCACTTAGGGATATTGAGTTGAATGCACAAATCAACTTGATGAAACTTGCATATCAACATTCATCCACA CCACAACATAAAGATGACCATGTCTTTCGAGCATCGTACTTGTATCCTGGGTGGTGTCGGGTTCCAGAGTTGTGCAGGGG TCCAAAGTGGTTGGAGTACAAGACAACAAATGATGAAATGATTATTAATCTCTCTTCTACCCAACTCTCCCCTTTGTTGG GTTTCATTTTTTGCTTCATCCTCGCTGGGGAGGACTCAAGAGAATATGGTGGACCAGTTAAGTTTGATATCACTATATTT GATGGTGAGAGTGAGGATAAAAAGGGTTATGTGATGGATTCATATATTGCAACGGGTCATCTATGCTTCATCTACGACAA AAAATGCTCTCACTTCATAACTAGCGCAACAAAAAATAAGACAAGGTTTAAAATTAAGGTTGCAACACGGGCAGTTAAAT CCAAAATGGGTCGAGTGATGAACTTGAAGATCATAGAGTTTGGAGTCAGCCCCGTAAACACCTTGACATATCACAATTTC AATCAGCAAATGAAATTTTGTGATTCCATAATCAAATGCGCACCTGAATCATTCGCAACATCATCCTATATATTTCCTTC CTGCAGTTGAAGATGAAGAATTTGATTTTTACTAAGTCCATATTCCAATGTAAGTAGATATGGTTAACATTTAAGTCATC AACTTTAGTTCTTATAACATTATATAGTATTATTGAACTATTATAAAAAAACACAATTTTCATTGAAATTTTGTAGACAC AGGATAGTATCTAAAGAGGTTTTGTAAGATTTAAATTTCAGCATGCGCAAAAAGTCAAGTTTGGGAGGGGCTTGGGTTTT AACTCTTATATATCCGCAATTCTTTGATTTGCATGATTATCTCTTCTTCTTAGATTTGCATTGAGCACCGCTCCTTTGCA AGGGAAGCCAGGATGTTATCTCTGTCCGATGATATCAAAAGTTCGCCCTACCAGGTTGGTTCGTGGGAAGCTGCTGACTA GATTTCACAGCAGACACTGTTGTTGGAAGCTAGGTAACCCTGGCCTTAATGATTCGGAGGGATGACACTTAGAACTCATG GTGGAAACTGATGAAGGCGATGTTGATGCATCTCTATTCAAGCAATTTGTTGGTTCACTCAGATATTTGTGCAATTTAAG GTCTGACATTTCCTATTGTGTGGGACTCATTAGCAAGTTCATGAGTGCACCTAAGAAATCACATTTAGCGGTTGCCAAAA GAATTTTGAGGTATTTGCAGGGTACTACAGACTATGTCATATTGTTTCAAGACAGAAAATAGTTGGAAAGGAGCTGGAGC TGATTGGTTTTACAGATTCTGATTACAATGGTGATTTTGATGATAGGAAAAGTACTTCTGAGTACTTGTTTAGCTGCATG GAGCTCCAATTTCTTGGATCTCAAAGAAGCAACCTGTCATAACTCTTTCTTCATGTGATGCTGAATAAATAGCAGAATCT TTTGCTGCCTGTCAGGTTGTTTGCCTTGAAGAGTTGCTAAAAGAAATGGGACATGACTTGGACATTGAGCCGACACACCT TTGTGGCTGGAATGGATGATGGGGAGGTTGCTGTTGATGAGTTGCTAAAAGAAATGGGACACGACTTGGAAATTCTTCTG CACCAGAAATGGATGATGGGGAGGTTGCTGTTGATGACCCCCCGGATGCACAACAGCAATAATAAAAGGGCTTGATGCTA TTTACAAGTTTAGACACCCAACATTGTATTTACAAGTTGTATTTTCAGAATGTGAATGTGGTGGAGGCTGCTAGTCCATG TCAAATTGCACAATCACTTCCACCAAGGCCAAGGGTGGCTAGGTTGATTCCATCTAAAACAGCTATGAATTTAGCATCAG CATCTGCTGCAGCTTCTCTCAATTTCAATGCTTTTCAATAATAGTCTTGGCTGTTAATATAATCAAAACCTCATTCTAAG TTTGCAATATGAACCGTTTCTTCAATTACAATACACAAATGAAACTAGCTTATACACTATTTCATCTTATTAAAAATGCT ACAAGTCCCCCAACTCAAGTTTGCTGTATGAAAAAAATAAAATGACTAGAGGCCATATATTGCTGAGAGATTGTTTGCTT AAGGCAGGGTGGATTACTTCCTTTTGATAACTGTAAAATAAATTTAGAAGATTAACTTGTTGCAGCCACATAAATCCATG TTTTGGCTTGTGGTTGTCGAGTCTTTTGAAAATGTGTGCATGTATTGGTGATCGAGTATGTATGACTCTGTATATTGAAG TATCAATAGCTGCAGATGTACCAAGTCCTTTATCACATTTGTCAAAGTTTATGCTAAATATGAGTCTTGTGTTGACAGGA GGATTGTGGTATTGTATTAAAAATCTGAAAATCATGGGAGACTTTGAAATATTAATTTTGAATTAACCAGAAAGGAAGAA ACAGAAAACT
CDS sequence (LotjaGi3g1v0527300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAAAACTTTGGGATGGAGTGAAGAATTTGGTTAATTTAAAAGAAGTTCTACTCGCTAGAGGCTATTTCCTGGAGGA GCTTCCAGACTTTTCAAAAGCCATAAATCTCGAGGTTCTGGATGTCTGTGATTGTGTGAGATTGAAGAGTGTCCATCCAT CTATTTACTCTCTCAACAAGCTTCAGATATTCAAACTAAAAGGGTGCGAGTCCCTTACCGAATTTACAAGTGATACTCGT TTAAGCTCCTTGTGGTATCTCGACCTTACAAGTTGCACAAGTCTAAGGAAGTTGTCAGTGACCTCAGAGAATATCACAGA CCTACGTTTGGGGGGAATTCCTGCCAATGTATTGCCGTCATCATTTGCTTGTCAAAGCAAGCTAGAAATCTTGGATTTAC GCAAAACTAAATATGAGACTTTACCTTCAAGCATCAAGAATCTTACAAGATTGCAATGTCTACTCATATCTGGCTGTTTT GAACTTCTGTCAATACCGGTGCTTCCCCTGTCCCTTGAAACTCTATCAACTGATGGATGCAAATCACTAAAGACAATATT CTTCCCTTTAACAGATGCTGAACAATTCAACGAAAAAAGGAAAAAAGTTTCATTCTGGAATTGCTGGAACTTGGATGAAC GTTCACTTAGGGATATTGAGTTGAATGCACAAATCAACTTGATGAAACTTGCATATCAACATTCATCCACACCACAACAT AAAGATGACCATGTCTTTCGAGCATCGTACTTGTATCCTGGGTGGTGTCGGGTTCCAGAGTTGTGCAGGGGTCCAAAGTG GTTGGAGTACAAGACAACAAATGATGAAATGATTATTAATCTCTCTTCTACCCAACTCTCCCCTTTGTTGGGTTTCATTT TTTGCTTCATCCTCGCTGGGGAGGACTCAAGAGAATATGGTGGACCAGTTAAGTTTGATATCACTATATTTGATGGTGAG AGTGAGGATAAAAAGGGTTATGTGATGGATTCATATATTGCAACGGGTCATCTATGCTTCATCTACGACAAAAAATGCTC TCACTTCATAACTAGCGCAACAAAAAATAAGACAAGGTTTAAAATTAAGGTTGCAACACGGGCAGTTAAATCCAAAATGG GTCGAGTGATGAACTTGAAGATCATAGAGTTTGGAGTCAGCCCCGTAAACACCTTGACATATCACAATTTCAATCAGCAA ATGAAATTTTGTGATTCCATAATCAAATGCGCACCTGAATCATTCGCAACATCATCCTATATATTTCCTTCCTGCAGTTG A
Protein sequence (LotjaGi3g1v0527300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQKLWDGVKNLVNLKEVLLARGYFLEELPDFSKAINLEVLDVCDCVRLKSVHPSIYSLNKLQIFKLKGCESLTEFTSDTR LSSLWYLDLTSCTSLRKLSVTSENITDLRLGGIPANVLPSSFACQSKLEILDLRKTKYETLPSSIKNLTRLQCLLISGCF ELLSIPVLPLSLETLSTDGCKSLKTIFFPLTDAEQFNEKRKKVSFWNCWNLDERSLRDIELNAQINLMKLAYQHSSTPQH KDDHVFRASYLYPGWCRVPELCRGPKWLEYKTTNDEMIINLSSTQLSPLLGFIFCFILAGEDSREYGGPVKFDITIFDGE SEDKKGYVMDSYIATGHLCFIYDKKCSHFITSATKNKTRFKIKVATRAVKSKMGRVMNLKIIEFGVSPVNTLTYHNFNQQ MKFCDSIIKCAPESFATSSYIFPSCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 240 | 240 | 4.2E-22 | ||
| PANTHER | 2 | 404 | 403 | 4.8E-70 | – | |
| PANTHER | 2 | 404 | 403 | 4.8E-70 | – | |
| SUPERFAMILY | 4 | 215 | 212 | 4.42E-22 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0527300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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