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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0528700 |
Transcript ID | LotjaGi3g1v0528700.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Peter Pan-like protein; TAIR: AT5G61770.1 PETER PAN-like protein; Swiss-Prot: sp|Q9ASU7|PPAN_ARATH Peter Pan-like protein; TrEMBL-Plants: tr|I1LPJ3|I1LPJ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0528700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:94546199..94549295) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTAAGCTCAGCTTCTCTCTCTTGTTCTCTGTCTTATCATCCTCTCTTTGCACAAATATCGATTTATTGTATTGCTAT GTTGAATATGGAACTGGGTATTGGTTTTTATTCAATTTCGTTTCAAACCCAACTGAAAAGTTCCAAACTTGGGTTCGTTT ATGTTGGTTGTATTTTGACACTGCACTTGTGAATGAACCAGAGGAAGCAGAAGAGTGGGGGGTTTAGGAGGCCTGTTGTC ATCAAGAACCATAAGCAACCACAGCAGCAGCCAACTGTGGATCCTATCACAGGGAAGAAGATCCCTAAGAGTTTTGTGTT TTCACGAGGGAAGTTGCCTGCTCCTCTCAAGCAGCTTCAGATGGACCTCAGAAAGTTGATGCTGCCATATACTGCTCTTA ACCTCAAGGTGAATTTTCATTTATTTTTCATGTTCCTTATTCATATTCGGACGTGCTATGCTAGGTGTATCTTTTTTATT GTATTCTGAAGATAATGAAATATTGTTTTAGTTGTTAGTAGTTTATGTAATTATGTGTTTAAGTCGCAACTCATGAGGAG GCTAAATTATGCTGGGAGTGTCTCGTAGTATTTTTGTTTAAAGATAAACTTCAGGTATTATGTTAAGACAAAGGAGGGAG GCTATTGGTAACGTGCTACCAAATTTGGATTGATTTATTGTCAGCTTAACATAGTGTTTCCTGATTTTCTTAATTTGAGA GAAATTTTTGATATATTATTAGGCGGGCATAAAAAAAGACTGTCATACCATTGAGTTTAAGCTTTAGATGTAGTACCATG TTGAACTTTGCCTAGTGTTCTGATTTCTGACTCCTATTGCAAATCTTGAACTTACTCTTGGCAGCTCTAACTTTTCAAAT ATCTATTTTTCTCAGTGCAACATAATAAGTTGGATTTTTAATAATAAAATACAATGAATTTGATTTTAGCAGAGATTTGT AGTTGTTACACTAGATAATACACGGCATGATTTCAATCTACATATGCCATGGTGGTTATGTGTTTGTGTTGACTGTATTC TATGATGTCTCCTATTTGCAGGAAAAGAAACGGAATAATCTGAGAGACTTTCTGAATGTTGCTGGACCTATGGGCGTCAC ACATTTCCTCATATTGTCAAAAACTGCTACTTCACCTTACTTGAAAGTCGCAACAACTCCGCAAGGACCTACTCTTTCAT TTAAGATACATGAATACGCATTGGCTGCTGACGTTGTTCGATCTCAATTGCATCCTCGATGCCCTAAAGATCTATTTAAA AATTCTGCTTTGGTAAAGTATTTCTTTGTATTAACATGCAACTGCGGCATCACATTTTCTTAAAATTTAGATAACAAAAT GAAATGTCAGGACTAGTTACTTTTCATGTCATTTGTTCTTCAAATGCCAGTGTGGCTGAGTTTTTTCCCAAGATTAAAAT TTGTTAATTGAATGCAAGTAAATGACTTCTATCTCTTAGTCGGTTGCTTTGCTACTAATTGTTGTTACACCAAACAGGCA TTTGTTTAATCTTTGTGATGTCCATTCTCATCTTATATCAATGTCTTGTATGATTTAACTCTTAGTGAGGGTATTTAAAT GTTCAAGGTTTGGCACCAAAATATGTGATTGTCTATCAGTGTAACTATTAGTAGTTAACTTGTATGCTTTTATTATTCAT CCAAGATTGATCCCTTATTGTTTTCTTGGCAGATTGTGCTTTCTGGATTTGTGAGTAGTGATTTACATCTAAAGCTTACA ACAAACATGTTTCAGAATATCTTTCCAACAATTGATGTCAAAACTGTGAGTTTGACTGACAGACATGCACATATCAATGA CTTGCTTAACATCCAAGCTGTTCATCTCCTAATGCAACAACATTTTGTTTCAGGTTAAACTCACCTCTTGCCAAAGGATA GTGTTGCTTAACTACAACAAAGACACGAAGCTCATTGATTTTCGGCATTATTCCATAAGATTACAACCTGTAGGTGTTTC ACGCAGATTAAGAAAACTTGTGCAGAGCCATCAGGTGCCTGATCTAAGGAATCTCCATGACGTGAGTGATTTTGTCACAA AGTAAGAAATCTGCTTATTTAATAAGCTTTCTTGTTTCCTTTTATAATGATTTACTGTAAGAGGGACCTAATGCAATCCC TTTCTGATATCTGACATTTGCATTCCGCCCATTATTTCCTTCTTTATGTATGTTAATTTATGATATTTCATAGTATTGAT GTGTTGAGCTGAATCCTGTCTAGCTCTTAGTTCCCCTTTTTTGTTTTTTTGGTGTGACTCTTTCTTTTTCTTTTGAGTGC ATTAATATATTTTGATTGGGAGATTCAAATATTAGTTTACTTTACTCTGAAAAAAAGGGGAGATTTGCTTATGGTTTTAG AATTTGATTGGGACCTCCTCCAGGTGCTAAATGACGCACCCTTGCAATTATGTAATCGTATAGCATAGATCATAAGCAAC AAAACAGCTTTCTCTATTTCATTTCTCAGCAGAATAATGAGATTAGCCTTTAAAGCAGTTGTCTTGTCTGTATTAATTTG ACATGTGGCTTTCTAAGATTTTTCCCTCATGGCCTACTATTTCCTCAATTGTTGTATTTTACTTGTTTCTATGTGAGAAG CAGTTCAGATCAGATTAAGAATAACGTAGTTTAGAAATGAACTAAAAATCGTGTGTTAGACAAGATAGTTAATCGTGGTA TTTTCTTAATATACTTAATTTCTTCATTTGTGACTTGTAAGGGCTGGGTATGGATCAGAAAGTGAAGCAGATGAAGAAGC AGCAACAGTGACTTTGTCTAGTGATATTGGTAGAGTTAACCGTGCTTCCACAAAAAGTGCAGTCAAACTTCAAGAGATTG GTCCCAGGATGACTCTTCAACTAGTTAGGATCGAGAAGGGACTGTGTTCCGGTGAAGTCCTCTTCAGCGAATATGGTACA TCATCCTACCCTTTTCCTTCGAATACTAATTGAGAAATCTATGGCATAGAATGCCACAATACGATTATCTTTTGTTGTCT AAATTCATTGAAGGCATAGATGTCAATAGAAGTTCTTTTGAGCTATTCTTGACTTAG
CDS sequence (LotjaGi3g1v0528700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGAAGCAGAAGAGTGGGGGGTTTAGGAGGCCTGTTGTCATCAAGAACCATAAGCAACCACAGCAGCAGCCAACTGT GGATCCTATCACAGGGAAGAAGATCCCTAAGAGTTTTGTGTTTTCACGAGGGAAGTTGCCTGCTCCTCTCAAGCAGCTTC AGATGGACCTCAGAAAGTTGATGCTGCCATATACTGCTCTTAACCTCAAGGAAAAGAAACGGAATAATCTGAGAGACTTT CTGAATGTTGCTGGACCTATGGGCGTCACACATTTCCTCATATTGTCAAAAACTGCTACTTCACCTTACTTGAAAGTCGC AACAACTCCGCAAGGACCTACTCTTTCATTTAAGATACATGAATACGCATTGGCTGCTGACGTTGTTCGATCTCAATTGC ATCCTCGATGCCCTAAAGATCTATTTAAAAATTCTGCTTTGATTGTGCTTTCTGGATTTGTGAGTAGTGATTTACATCTA AAGCTTACAACAAACATGTTTCAGAATATCTTTCCAACAATTGATGTCAAAACTGTTAAACTCACCTCTTGCCAAAGGAT AGTGTTGCTTAACTACAACAAAGACACGAAGCTCATTGATTTTCGGCATTATTCCATAAGATTACAACCTGTAGGTGTTT CACGCAGATTAAGAAAACTTGTGCAGAGCCATCAGGTGCCTGATCTAAGGAATCTCCATGACGTGAGTGATTTTGTCACA AAGGCTGGGTATGGATCAGAAAGTGAAGCAGATGAAGAAGCAGCAACAGTGACTTTGTCTAGTGATATTGGTAGAGTTAA CCGTGCTTCCACAAAAAGTGCAGTCAAACTTCAAGAGATTGGTCCCAGGATGACTCTTCAACTAGTTAGGATCGAGAAGG GACTGTGTTCCGGTGAAGTCCTCTTCAGCGAATATGGTACATCATCCTACCCTTTTCCTTCGAATACTAATTGA
Protein sequence (LotjaGi3g1v0528700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKQKSGGFRRPVVIKNHKQPQQQPTVDPITGKKIPKSFVFSRGKLPAPLKQLQMDLRKLMLPYTALNLKEKKRNNLRDF LNVAGPMGVTHFLILSKTATSPYLKVATTPQGPTLSFKIHEYALAADVVRSQLHPRCPKDLFKNSALIVLSGFVSSDLHL KLTTNMFQNIFPTIDVKTVKLTSCQRIVLLNYNKDTKLIDFRHYSIRLQPVGVSRRLRKLVQSHQVPDLRNLHDVSDFVT KAGYGSESEADEEAATVTLSSDIGRVNRASTKSAVKLQEIGPRMTLQLVRIEKGLCSGEVLFSEYGTSSYPFPSNTN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 29 | 29 | - | – | |
PANTHER | 16 | 305 | 290 | 4.3E-123 | – | |
PANTHER | 16 | 305 | 290 | 4.3E-123 | – | |
ProSiteProfiles | 36 | 297 | 262 | 31.429 | ||
SMART | 39 | 291 | 253 | 1.5E-64 | ||
Pfam | 47 | 290 | 244 | 1.7E-45 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0528700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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